Guide to the Human Genome
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Name: WNT4 Sequence: fasta or formatted (351aa) NCBI GI: 17402922
Description:

wingless-type MMTV integration site family, member 4 precursor

Referenced in:

Wnt Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         28           3
 C cysteine            7.1         25           2
 D aspartate           3.1         11           1
 E glutamate           6.8         24           3
 F phenylalanine       4.6         16           1
 G glycine             7.1         25           1
 H histidine           2.6          9           1
 I isoleucine          2.0          7           1
 K lysine              4.8         17           1
 L leucine             7.7         27           2
 M methionine          1.7          6           1
 N asparagine          2.8         10           2
 P proline             2.8         10           2
 Q glutamine           4.6         16           1
 R arginine            9.1         32           2
 S serine              9.4         33           3
 T threonine           4.3         15           1
 V valine              8.5         30           2
 W tryptophan          1.4          5           1
 Y tyrosine            1.4          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   wingless-type MMTV integration site family, member 4... 
WNT7B                 0.467   wingless-type MMTV integration site family, member 7...
WNT5A                 0.464   wingless-type MMTV integration site family, member 5...
WNT3                  0.464   wingless-type MMTV integration site family, member 3...
WNT2B                 0.462   wingless-type MMTV integration site family, member 2...
WNT3A                 0.458   wingless-type MMTV integration site family, member 3...
WNT2B                 0.458   wingless-type MMTV integration site family, member 2...
WNT7A                 0.452   wingless-type MMTV integration site family, member 7...
WNT2                  0.445   wingless-type MMTV integration site family member 2 p...
WNT5B                 0.445   wingless-type MMTV integration site family, member 5...
WNT5B                 0.445   wingless-type MMTV integration site family, member 5...
WNT1                  0.422   wingless-type MMTV integration site family, member 1 ...
WNT16                 0.420   wingless-type MMTV integration site family, member 1...
WNT16                 0.411   wingless-type MMTV integration site family, member 1...
WNT11                 0.411   wingless-type MMTV integration site family, member 1...
WNT6                  0.395   wingless-type MMTV integration site family, member 6...
WNT10A                0.360   wingless-type MMTV integration site family, member 1...
WNT10B                0.351   wingless-type MMTV integration site family, member 1...
WNT8B                 0.329   wingless-type MMTV integration site family, member ...
WNT8A                 0.310   wingless-type MMTV integration site family, member 8...
WNT9B                 0.304   wingless-type MMTV integration site family, member 9...
WNT9A                 0.293   wingless-type MMTV integration site family, member 9...
LOC100289775          0.208   PREDICTED: hypothetical protein XP_002348164 
LOC100293688          0.017   PREDICTED: similar to hCG2042405 
LOC100290987          0.017   PREDICTED: hypothetical protein XP_002347812 
LOC100288061          0.017   PREDICTED: hypothetical protein XP_002343602 
NUMA1                 0.011   nuclear mitotic apparatus protein 1 
ZNF682                0.010   zinc finger protein 682 isoform 2 
ZNF682                0.010   zinc finger protein 682 isoform 1 
ADAM23                0.007   ADAM metallopeptidase domain 23 preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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