Guide to the Human Genome
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Name: KRTAP4-9 Sequence: fasta or formatted (210aa) NCBI GI: 225690551
Description:

keratin associated protein 4-9

Referenced in:

Keratins

Other entries for this name:
alt prot [254aa] PREDICTED: keratin associated protein 4-9
alt prot [210aa] PREDICTED: keratin associated protein 4-9 isoform 1
alt prot [195aa] PREDICTED: keratin associated protein 4-9 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.0          2           1
 C cysteine           35.2         74           3
 D aspartate           1.0          2           1
 E glutamate           1.9          4           1
 F phenylalanine       0.0          0           0
 G glycine             1.9          4           1
 H histidine           1.0          2           1
 I isoleucine          1.4          3           1
 K lysine              0.5          1           1
 L leucine             1.0          2           1
 M methionine          0.5          1           1
 N asparagine          0.5          1           1
 P proline            10.0         21           1
 Q glutamine           6.2         13           1
 R arginine            8.6         18           1
 S serine             15.7         33           2
 T threonine           7.6         16           2
 V valine              5.2         11           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.0          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 4-9 
KRTAP4-9              0.996   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-9              0.860   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-12             0.854   keratin associated protein 4-12 
KRTAP4-8              0.838   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.838   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.790   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.790   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.788   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.788   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-11             0.752   keratin associated protein 4-11 
KRTAP4-8              0.743   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.645   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.645   keratin associated protein 4.8 
KRTAP4-5              0.645   keratin associated protein 4-5 
KRTAP4-3              0.629   keratin associated protein 4-3 
KRTAP4-7              0.613   keratin associated protein 4-7 
KRTAP4-7              0.613   PREDICTED: keratin associated protein 4-7 
KRTAP4-4              0.545   keratin associated protein 4.4 
KRTAP4-2              0.509   keratin associated protein 4-2 
LOC728318             0.415   PREDICTED: hypothetical protein 
LOC728318             0.415   PREDICTED: hypothetical protein 
LOC728318             0.411   PREDICTED: hypothetical protein 
KRTAP10-11            0.389   keratin associated protein 10-11 
KRTAP4-1              0.389   keratin associated protein 4-1 
LOC100131696          0.377   PREDICTED: keratin associated protein 
LOC100288060          0.377   PREDICTED: hypothetical protein XP_002343557 
KRTAP10-1             0.377   keratin associated protein 10-1 
LOC100131696          0.375   PREDICTED: keratin associated protein 
KRTAP10-5             0.373   keratin associated protein 10-5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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