Guide to the Human Genome
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Name: WNT1 Sequence: fasta or formatted (370aa) NCBI GI: 4885655
Description:

wingless-type MMTV integration site family, member 1 precursor

Referenced in:

Rho and Rac
Wnt Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         26           2
 C cysteine            6.2         23           2
 D aspartate           3.5         13           1
 E glutamate           4.6         17           1
 F phenylalanine       3.5         13           1
 G glycine             9.5         35           2
 H histidine           3.5         13           1
 I isoleucine          2.2          8           1
 K lysine              2.2          8           1
 L leucine            10.5         39           3
 M methionine          1.4          5           1
 N asparagine          4.6         17           2
 P proline             4.6         17           2
 Q glutamine           2.2          8           1
 R arginine           10.8         40           3
 S serine              8.9         33           3
 T threonine           5.9         22           2
 V valine              5.1         19           1
 W tryptophan          2.7         10           2
 Y tyrosine            1.1          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   wingless-type MMTV integration site family, member 1 ... 
WNT3                  0.393   wingless-type MMTV integration site family, member 3...
WNT4                  0.389   wingless-type MMTV integration site family, member 4...
WNT3A                 0.385   wingless-type MMTV integration site family, member 3...
WNT2B                 0.360   wingless-type MMTV integration site family, member 2...
WNT2                  0.356   wingless-type MMTV integration site family member 2 p...
WNT2B                 0.355   wingless-type MMTV integration site family, member 2...
WNT6                  0.351   wingless-type MMTV integration site family, member 6...
WNT5A                 0.347   wingless-type MMTV integration site family, member 5...
WNT5B                 0.336   wingless-type MMTV integration site family, member 5...
WNT5B                 0.336   wingless-type MMTV integration site family, member 5...
WNT7B                 0.334   wingless-type MMTV integration site family, member 7...
WNT7A                 0.334   wingless-type MMTV integration site family, member 7...
WNT10A                0.328   wingless-type MMTV integration site family, member 1...
WNT16                 0.328   wingless-type MMTV integration site family, member 1...
WNT16                 0.328   wingless-type MMTV integration site family, member 1...
WNT10B                0.313   wingless-type MMTV integration site family, member 1...
WNT11                 0.299   wingless-type MMTV integration site family, member 1...
WNT8A                 0.290   wingless-type MMTV integration site family, member 8...
WNT8B                 0.283   wingless-type MMTV integration site family, member ...
WNT9A                 0.283   wingless-type MMTV integration site family, member 9...
WNT9B                 0.279   wingless-type MMTV integration site family, member 9...
LOC100289775          0.140   PREDICTED: hypothetical protein XP_002348164 
LOC100293688          0.010   PREDICTED: similar to hCG2042405 
LOC100290987          0.010   PREDICTED: hypothetical protein XP_002347812 
LOC100288061          0.010   PREDICTED: hypothetical protein XP_002343602 
MLLT1                 0.008   myeloid/lymphoid or mixed-lineage leukemia (trithora...
KRTAP5-10             0.008   keratin associated protein 5-10 
EFEMP1                0.008   EGF-containing fibulin-like extracellular matrix pro...
EFEMP1                0.008   EGF-containing fibulin-like extracellular matrix pro...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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