Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: WNT9B Sequence: fasta or formatted (357aa) NCBI GI: 17017976
Description:

wingless-type MMTV integration site family, member 9B precursor

Referenced in:

Wnt Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.6         38           4
 C cysteine            7.0         25           2
 D aspartate           3.1         11           2
 E glutamate           4.8         17           2
 F phenylalanine       3.1         11           1
 G glycine             8.7         31           2
 H histidine           2.5          9           1
 I isoleucine          0.3          1           1
 K lysine              5.0         18           1
 L leucine            12.0         43           2
 M methionine          1.1          4           1
 N asparagine          1.7          6           1
 P proline             4.2         15           3
 Q glutamine           4.8         17           2
 R arginine            8.4         30           2
 S serine              8.4         30           2
 T threonine           5.3         19           2
 V valine              4.8         17           1
 W tryptophan          1.7          6           1
 Y tyrosine            2.5          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   wingless-type MMTV integration site family, member 9... 
WNT9A                 0.592   wingless-type MMTV integration site family, member 9...
WNT16                 0.309   wingless-type MMTV integration site family, member 1...
WNT16                 0.305   wingless-type MMTV integration site family, member 1...
WNT2B                 0.302   wingless-type MMTV integration site family, member 2...
WNT2B                 0.300   wingless-type MMTV integration site family, member 2...
WNT4                  0.297   wingless-type MMTV integration site family, member 4...
WNT1                  0.295   wingless-type MMTV integration site family, member 1 ...
WNT2                  0.288   wingless-type MMTV integration site family member 2 p...
WNT7B                 0.287   wingless-type MMTV integration site family, member 7...
WNT10B                0.286   wingless-type MMTV integration site family, member 1...
WNT6                  0.284   wingless-type MMTV integration site family, member 6...
WNT7A                 0.283   wingless-type MMTV integration site family, member 7...
WNT10A                0.273   wingless-type MMTV integration site family, member 1...
WNT5A                 0.269   wingless-type MMTV integration site family, member 5...
WNT5B                 0.254   wingless-type MMTV integration site family, member 5...
WNT5B                 0.254   wingless-type MMTV integration site family, member 5...
WNT11                 0.250   wingless-type MMTV integration site family, member 1...
WNT8B                 0.247   wingless-type MMTV integration site family, member ...
WNT3                  0.245   wingless-type MMTV integration site family, member 3...
WNT8A                 0.244   wingless-type MMTV integration site family, member 8...
WNT3A                 0.243   wingless-type MMTV integration site family, member 3...
LOC100290987          0.146   PREDICTED: hypothetical protein XP_002347812 
LOC100288061          0.146   PREDICTED: hypothetical protein XP_002343602 
LOC100293688          0.143   PREDICTED: similar to hCG2042405 
LOC100289775          0.111   PREDICTED: hypothetical protein XP_002348164 
JAG1                  0.012   jagged 1 precursor 
KRTAP4-8              0.012   PREDICTED: keratin associated protein 4-8 
KRTAP4-9              0.012   keratin associated protein 4-9 
PROC                  0.011   protein C 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press