Guide to the Human Genome
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Name: LOC100289775 Sequence: fasta or formatted (661aa) NCBI GI: 239752226
Description:

PREDICTED: hypothetical protein XP_002348164

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.4         69           2
 C cysteine            3.6         24           2
 D aspartate           2.9         19           1
 E glutamate           4.5         30           2
 F phenylalanine       1.4          9           1
 G glycine             9.8         65           3
 H histidine           2.1         14           1
 I isoleucine          2.4         16           2
 K lysine              2.9         19           2
 L leucine            10.7         71           3
 M methionine          1.4          9           1
 N asparagine          2.6         17           2
 P proline            10.7         71           4
 Q glutamine           4.8         32           2
 R arginine            6.8         45           2
 S serine              8.9         59           2
 T threonine           5.3         35           2
 V valine              5.1         34           2
 W tryptophan          2.3         15           1
 Y tyrosine            1.2          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein XP_002348164 
WNT7B                 0.237   wingless-type MMTV integration site family, member 7...
WNT7A                 0.203   wingless-type MMTV integration site family, member 7...
WNT2B                 0.117   wingless-type MMTV integration site family, member 2...
WNT2B                 0.117   wingless-type MMTV integration site family, member 2...
WNT5B                 0.108   wingless-type MMTV integration site family, member 5...
WNT5B                 0.108   wingless-type MMTV integration site family, member 5...
WNT4                  0.108   wingless-type MMTV integration site family, member 4...
WNT5A                 0.108   wingless-type MMTV integration site family, member 5...
WNT2                  0.106   wingless-type MMTV integration site family member 2 p...
WNT3                  0.099   wingless-type MMTV integration site family, member 3...
WNT3A                 0.098   wingless-type MMTV integration site family, member 3...
WNT16                 0.092   wingless-type MMTV integration site family, member 1...
WNT16                 0.091   wingless-type MMTV integration site family, member 1...
WNT6                  0.090   wingless-type MMTV integration site family, member 6...
WNT10A                0.083   wingless-type MMTV integration site family, member 1...
WNT8B                 0.080   wingless-type MMTV integration site family, member ...
WNT1                  0.079   wingless-type MMTV integration site family, member 1 ...
WNT8A                 0.075   wingless-type MMTV integration site family, member 8...
WNT10B                0.073   wingless-type MMTV integration site family, member 1...
WNT9A                 0.062   wingless-type MMTV integration site family, member 9...
WNT11                 0.061   wingless-type MMTV integration site family, member 1...
WNT9B                 0.059   wingless-type MMTV integration site family, member 9...
FLJ22184              0.014   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.014   PREDICTED: hypothetical protein LOC80164 
MLL2                  0.014   myeloid/lymphoid or mixed-lineage leukemia 2 
CRTC1                 0.013   mucoepidermoid carcinoma translocated 1 isoform 3 [...
CRTC1                 0.013   mucoepidermoid carcinoma translocated 1 isoform 1 [...
FLJ22184              0.013   PREDICTED: hypothetical protein FLJ22184 
WIPF1                 0.013   WAS/WASL interacting protein family, member 1 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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