Guide to the Human Genome
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Name: KRTAP4-11 Sequence: fasta or formatted (195aa) NCBI GI: 225690544
Description:

keratin associated protein 4-11

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.5          1           1
 C cysteine           35.4         69           3
 D aspartate           0.5          1           1
 E glutamate           1.5          3           1
 F phenylalanine       0.0          0           0
 G glycine             2.1          4           1
 H histidine           1.5          3           1
 I isoleucine          2.1          4           1
 K lysine              0.5          1           1
 L leucine             1.5          3           1
 M methionine          1.0          2           1
 N asparagine          0.5          1           1
 P proline             9.7         19           1
 Q glutamine           5.6         11           1
 R arginine            9.2         18           1
 S serine             16.4         32           2
 T threonine           5.6         11           2
 V valine              5.1         10           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.0          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 4-11 
KRTAP4-8              0.918   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.905   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.905   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.897   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-9              0.894   keratin associated protein 4-9 
KRTAP4-8              0.892   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.892   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.877   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.877   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.875   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-12             0.847   keratin associated protein 4-12 
KRTAP4-8              0.834   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.834   keratin associated protein 4.8 
KRTAP4-5              0.754   keratin associated protein 4-5 
KRTAP4-3              0.657   keratin associated protein 4-3 
KRTAP4-4              0.610   keratin associated protein 4.4 
KRTAP4-7              0.573   keratin associated protein 4-7 
KRTAP4-7              0.573   PREDICTED: keratin associated protein 4-7 
KRTAP4-2              0.481   keratin associated protein 4-2 
LOC728318             0.418   PREDICTED: hypothetical protein 
LOC728318             0.418   PREDICTED: hypothetical protein 
LOC728318             0.418   PREDICTED: hypothetical protein 
KRTAP4-1              0.409   keratin associated protein 4-1 
KRTAP10-11            0.390   keratin associated protein 10-11 
KRTAP10-5             0.381   keratin associated protein 10-5 
LOC728341             0.379   PREDICTED: keratin-associated protein 9-2-like 1-li...
KRTAP10-7             0.375   keratin associated protein 10-7 
KRTAP9-2              0.373   keratin associated protein 9.2 
KRTAP10-6             0.369   keratin associated protein 10-6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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