Guide to the Human Genome
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Name: WNT10B Sequence: fasta or formatted (389aa) NCBI GI: 16936522
Description:

wingless-type MMTV integration site family, member 10B precursor

Referenced in:

Adipose Tissue
Wnt Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         27           2
 C cysteine            6.4         25           2
 D aspartate           3.6         14           1
 E glutamate           5.1         20           2
 F phenylalanine       3.9         15           1
 G glycine             9.8         38           3
 H histidine           3.6         14           2
 I isoleucine          1.8          7           1
 K lysine              4.1         16           1
 L leucine            11.3         44           2
 M methionine          1.5          6           1
 N asparagine          3.3         13           2
 P proline             6.2         24           3
 Q glutamine           3.6         14           1
 R arginine           10.3         40           2
 S serine              8.0         31           2
 T threonine           3.9         15           1
 V valine              4.4         17           2
 W tryptophan          1.8          7           1
 Y tyrosine            0.5          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   wingless-type MMTV integration site family, member 1... 
WNT10A                0.613   wingless-type MMTV integration site family, member 1...
WNT6                  0.313   wingless-type MMTV integration site family, member 6...
WNT7A                 0.312   wingless-type MMTV integration site family, member 7...
WNT7B                 0.310   wingless-type MMTV integration site family, member 7...
WNT4                  0.308   wingless-type MMTV integration site family, member 4...
WNT3A                 0.308   wingless-type MMTV integration site family, member 3...
WNT3                  0.300   wingless-type MMTV integration site family, member 3...
WNT1                  0.298   wingless-type MMTV integration site family, member 1 ...
WNT2B                 0.296   wingless-type MMTV integration site family, member 2...
WNT2B                 0.294   wingless-type MMTV integration site family, member 2...
WNT2                  0.286   wingless-type MMTV integration site family member 2 p...
WNT5A                 0.272   wingless-type MMTV integration site family, member 5...
WNT5B                 0.269   wingless-type MMTV integration site family, member 5...
WNT5B                 0.269   wingless-type MMTV integration site family, member 5...
WNT11                 0.262   wingless-type MMTV integration site family, member 1...
WNT9B                 0.257   wingless-type MMTV integration site family, member 9...
WNT16                 0.253   wingless-type MMTV integration site family, member 1...
WNT16                 0.253   wingless-type MMTV integration site family, member 1...
WNT9A                 0.238   wingless-type MMTV integration site family, member 9...
WNT8B                 0.214   wingless-type MMTV integration site family, member ...
WNT8A                 0.204   wingless-type MMTV integration site family, member 8...
LOC100289775          0.123   PREDICTED: hypothetical protein XP_002348164 
LOC100293688          0.017   PREDICTED: similar to hCG2042405 
LOC100290987          0.017   PREDICTED: hypothetical protein XP_002347812 
LOC100288061          0.017   PREDICTED: hypothetical protein XP_002343602 
DVL1                  0.012   dishevelled 1 
STARD9                0.010   PREDICTED: StAR-related lipid transfer (START) doma...
CMA1                  0.009   chymase 1, mast cell preproprotein 
LRP1B                 0.009   low density lipoprotein-related protein 1B precursor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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