Guide to the Human Genome
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Name: WNT3 Sequence: fasta or formatted (355aa) NCBI GI: 13540477
Description:

wingless-type MMTV integration site family, member 3

Referenced in:

Wnt Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         22           1
 C cysteine            6.8         24           2
 D aspartate           5.1         18           2
 E glutamate           6.5         23           1
 F phenylalanine       3.7         13           1
 G glycine             9.3         33           2
 H histidine           4.2         15           2
 I isoleucine          4.2         15           1
 K lysine              5.1         18           1
 L leucine             8.2         29           3
 M methionine          1.4          5           1
 N asparagine          3.1         11           2
 P proline             4.5         16           2
 Q glutamine           2.5          9           2
 R arginine            6.8         24           2
 S serine              6.8         24           1
 T threonine           5.6         20           2
 V valine              5.1         18           2
 W tryptophan          2.5          9           2
 Y tyrosine            2.5          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   wingless-type MMTV integration site family, member 3... 
WNT3A                 0.852   wingless-type MMTV integration site family, member 3...
WNT4                  0.438   wingless-type MMTV integration site family, member 4...
WNT5B                 0.409   wingless-type MMTV integration site family, member 5...
WNT5B                 0.409   wingless-type MMTV integration site family, member 5...
WNT2                  0.409   wingless-type MMTV integration site family member 2 p...
WNT1                  0.403   wingless-type MMTV integration site family, member 1 ...
WNT7B                 0.403   wingless-type MMTV integration site family, member 7...
WNT2B                 0.401   wingless-type MMTV integration site family, member 2...
WNT5A                 0.399   wingless-type MMTV integration site family, member 5...
WNT2B                 0.399   wingless-type MMTV integration site family, member 2...
WNT7A                 0.398   wingless-type MMTV integration site family, member 7...
WNT16                 0.351   wingless-type MMTV integration site family, member 1...
WNT16                 0.349   wingless-type MMTV integration site family, member 1...
WNT10A                0.345   wingless-type MMTV integration site family, member 1...
WNT6                  0.337   wingless-type MMTV integration site family, member 6...
WNT11                 0.325   wingless-type MMTV integration site family, member 1...
WNT10B                0.324   wingless-type MMTV integration site family, member 1...
WNT8A                 0.286   wingless-type MMTV integration site family, member 8...
WNT8B                 0.282   wingless-type MMTV integration site family, member ...
WNT9B                 0.238   wingless-type MMTV integration site family, member 9...
WNT9A                 0.234   wingless-type MMTV integration site family, member 9...
LOC100289775          0.180   PREDICTED: hypothetical protein XP_002348164 
ZFP106                0.011   zinc finger protein 106 homolog 
ACSS2                 0.008   acyl-CoA synthetase short-chain family member 2 iso...
ACSS2                 0.008   acyl-CoA synthetase short-chain family member 2 isofo...
ADAM12                0.008   ADAM metallopeptidase domain 12 isoform 2 preproprot...
ADAM12                0.008   ADAM metallopeptidase domain 12 isoform 1 preproprot...
MRC2                  0.007   mannose receptor, C type 2 
C1orf9                0.007   chromosome 1 open reading frame 9 protein isoform 2...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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