Guide to the Human Genome
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Name: WNT11 Sequence: fasta or formatted (354aa) NCBI GI: 17017974
Description:

wingless-type MMTV integration site family, member 11 precursor

Referenced in:

Wnt Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         31           3
 C cysteine            7.3         26           2
 D aspartate           4.2         15           1
 E glutamate           4.5         16           1
 F phenylalanine       1.4          5           1
 G glycine             7.1         25           2
 H histidine           3.1         11           1
 I isoleucine          1.7          6           1
 K lysine              6.2         22           2
 L leucine             9.9         35           2
 M methionine          3.1         11           1
 N asparagine          3.4         12           1
 P proline             4.2         15           2
 Q glutamine           4.0         14           1
 R arginine            7.6         27           2
 S serine              7.6         27           2
 T threonine           4.5         16           1
 V valine              6.8         24           2
 W tryptophan          1.4          5           1
 Y tyrosine            3.1         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   wingless-type MMTV integration site family, member 1... 
WNT4                  0.401   wingless-type MMTV integration site family, member 4...
WNT5B                 0.343   wingless-type MMTV integration site family, member 5...
WNT5B                 0.343   wingless-type MMTV integration site family, member 5...
WNT5A                 0.342   wingless-type MMTV integration site family, member 5...
WNT3                  0.336   wingless-type MMTV integration site family, member 3...
WNT3A                 0.329   wingless-type MMTV integration site family, member 3...
WNT2B                 0.326   wingless-type MMTV integration site family, member 2...
WNT2B                 0.326   wingless-type MMTV integration site family, member 2...
WNT16                 0.325   wingless-type MMTV integration site family, member 1...
WNT16                 0.325   wingless-type MMTV integration site family, member 1...
WNT7B                 0.324   wingless-type MMTV integration site family, member 7...
WNT7A                 0.318   wingless-type MMTV integration site family, member 7...
WNT1                  0.317   wingless-type MMTV integration site family, member 1 ...
WNT2                  0.312   wingless-type MMTV integration site family member 2 p...
WNT6                  0.297   wingless-type MMTV integration site family, member 6...
WNT10B                0.292   wingless-type MMTV integration site family, member 1...
WNT10A                0.279   wingless-type MMTV integration site family, member 1...
WNT8A                 0.253   wingless-type MMTV integration site family, member 8...
WNT8B                 0.251   wingless-type MMTV integration site family, member ...
WNT9B                 0.250   wingless-type MMTV integration site family, member 9...
WNT9A                 0.249   wingless-type MMTV integration site family, member 9...
LOC100289775          0.114   PREDICTED: hypothetical protein XP_002348164 
LRRC3                 0.014   leucine-rich repeat-containing 3 precursor 
CNN2                  0.010   calponin 2 isoform b 
CNN2                  0.010   calponin 2 isoform a 
ZNF643                0.007   zinc finger protein 643 
ADAM12                0.007   ADAM metallopeptidase domain 12 isoform 2 preproprot...
ADAM12                0.007   ADAM metallopeptidase domain 12 isoform 1 preproprot...
CELSR3                0.007   cadherin EGF LAG seven-pass G-type receptor 3 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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