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Search of human proteins with 60498978
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|60498978 elastin microfibril interfacer 2 [Homo sapiens]
(1053 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|60498978 elastin microfibril interfacer 2 [Homo sapiens] 2149 0.0
gi|5901944 elastin microfibril interfacer 1 [Homo sapiens] 279 9e-75
gi|45433501 elastin microfibril interfacer 3 [Homo sapiens] 223 6e-58
gi|118498339 EMI domain containing 2 [Homo sapiens] 88 5e-17
gi|45269141 multimerin 1 [Homo sapiens] 84 9e-16
gi|154937344 complement component 1, q subcomponent-like 2 [Homo... 82 2e-15
gi|50511941 EMI domain containing 1 [Homo sapiens] 81 5e-15
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 78 4e-14
gi|56606142 complement component 1, q subcomponent-like 4 [Homo ... 77 1e-13
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 76 1e-13
gi|13994280 C1q and tumor necrosis factor related protein 7 isof... 75 3e-13
gi|206597454 C1q and tumor necrosis factor related protein 7 iso... 75 3e-13
gi|206597452 C1q and tumor necrosis factor related protein 7 iso... 75 3e-13
gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens] 73 2e-12
gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens] 73 2e-12
gi|18641360 collectin sub-family member 12 [Homo sapiens] 72 2e-12
gi|94818738 C1q and tumor necrosis factor related protein 2 [Hom... 70 1e-11
gi|221316695 multimerin 2 precursor [Homo sapiens] 69 2e-11
gi|5729785 complement component 1, q subcomponent-like 1 [Homo s... 67 9e-11
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 66 2e-10
gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa... 64 7e-10
gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 64 1e-09
gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 64 1e-09
gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho... 64 1e-09
gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s... 64 1e-09
gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo s... 64 1e-09
gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo s... 64 1e-09
gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo s... 64 1e-09
gi|89142730 alpha 3 type IV collagen isoform 1 precursor [Homo s... 64 1e-09
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 63 1e-09
>gi|60498978 elastin microfibril interfacer 2 [Homo sapiens]
Length = 1053
Score = 2149 bits (5568), Expect = 0.0
Identities = 1053/1053 (100%), Positives = 1053/1053 (100%)
Query: 1 MWQPRRPWPRVPWRWALALLALVGAGLCHAGPQPGYPARPSARNKNWCAYIVNKNVSCSV 60
MWQPRRPWPRVPWRWALALLALVGAGLCHAGPQPGYPARPSARNKNWCAYIVNKNVSCSV
Sbjct: 1 MWQPRRPWPRVPWRWALALLALVGAGLCHAGPQPGYPARPSARNKNWCAYIVNKNVSCSV 60
Query: 61 LEGSESFIQAQYNCAWNQMPCPSALVYRVNFRPRYVTRYKTVTQLEWRCCPGFRGGDCQE 120
LEGSESFIQAQYNCAWNQMPCPSALVYRVNFRPRYVTRYKTVTQLEWRCCPGFRGGDCQE
Sbjct: 61 LEGSESFIQAQYNCAWNQMPCPSALVYRVNFRPRYVTRYKTVTQLEWRCCPGFRGGDCQE 120
Query: 121 GPKDPVKTLRPTPARPRNSLKKATDNEPSQFSEPRKTLSPTGTAQPSWGVDPKEGPQELQ 180
GPKDPVKTLRPTPARPRNSLKKATDNEPSQFSEPRKTLSPTGTAQPSWGVDPKEGPQELQ
Sbjct: 121 GPKDPVKTLRPTPARPRNSLKKATDNEPSQFSEPRKTLSPTGTAQPSWGVDPKEGPQELQ 180
Query: 181 EKKIQVLEEKVLRLTRTVLDLQSSLAGVSENLKHATQDDASRTRAPGLSSQHPKPDTTVS 240
EKKIQVLEEKVLRLTRTVLDLQSSLAGVSENLKHATQDDASRTRAPGLSSQHPKPDTTVS
Sbjct: 181 EKKIQVLEEKVLRLTRTVLDLQSSLAGVSENLKHATQDDASRTRAPGLSSQHPKPDTTVS 240
Query: 241 GDTETGQSPGVFNTKESGMKDIKSELAEVKDTLKNKSDKLEELDGKVKGYEGQLRQLQEA 300
GDTETGQSPGVFNTKESGMKDIKSELAEVKDTLKNKSDKLEELDGKVKGYEGQLRQLQEA
Sbjct: 241 GDTETGQSPGVFNTKESGMKDIKSELAEVKDTLKNKSDKLEELDGKVKGYEGQLRQLQEA 300
Query: 301 AQGPTVTMTTNELYQAYVDSKIDALREELMEGMDRKLADLKNSCEYKLTGLQQQCDDYGS 360
AQGPTVTMTTNELYQAYVDSKIDALREELMEGMDRKLADLKNSCEYKLTGLQQQCDDYGS
Sbjct: 301 AQGPTVTMTTNELYQAYVDSKIDALREELMEGMDRKLADLKNSCEYKLTGLQQQCDDYGS 360
Query: 361 SYLGVIELIGEKETSLRKEINNLRARLQEPSAQANCCDSEKNGDIGQQIKTLDQKIERVA 420
SYLGVIELIGEKETSLRKEINNLRARLQEPSAQANCCDSEKNGDIGQQIKTLDQKIERVA
Sbjct: 361 SYLGVIELIGEKETSLRKEINNLRARLQEPSAQANCCDSEKNGDIGQQIKTLDQKIERVA 420
Query: 421 EATRMLNGRLDNEFDRLIVPEPDVDFDAKWNELDARINVTEKNAEEHCFYIEETLRGAIN 480
EATRMLNGRLDNEFDRLIVPEPDVDFDAKWNELDARINVTEKNAEEHCFYIEETLRGAIN
Sbjct: 421 EATRMLNGRLDNEFDRLIVPEPDVDFDAKWNELDARINVTEKNAEEHCFYIEETLRGAIN 480
Query: 481 GEVGDLKQLVDQKIQSLEDRLGSVLLQMTNNTGAELSPPGAAALPGVSGSGDERVMMELN 540
GEVGDLKQLVDQKIQSLEDRLGSVLLQMTNNTGAELSPPGAAALPGVSGSGDERVMMELN
Sbjct: 481 GEVGDLKQLVDQKIQSLEDRLGSVLLQMTNNTGAELSPPGAAALPGVSGSGDERVMMELN 540
Query: 541 HLKDKVQVVEDICLLNIQGKPHGMEGALPNREDRAVRDSLHLLKSLNDTMHRKFQETEQT 600
HLKDKVQVVEDICLLNIQGKPHGMEGALPNREDRAVRDSLHLLKSLNDTMHRKFQETEQT
Sbjct: 541 HLKDKVQVVEDICLLNIQGKPHGMEGALPNREDRAVRDSLHLLKSLNDTMHRKFQETEQT 600
Query: 601 IQKLQQDFSFLYSQLNHTENDVTHLQKEMSNCRAGENAGMGRFTKVGEQERTVDTLPSPQ 660
IQKLQQDFSFLYSQLNHTENDVTHLQKEMSNCRAGENAGMGRFTKVGEQERTVDTLPSPQ
Sbjct: 601 IQKLQQDFSFLYSQLNHTENDVTHLQKEMSNCRAGENAGMGRFTKVGEQERTVDTLPSPQ 660
Query: 661 HPVAHCCSQLEERWQRLQSQVISELDACKECTQGVQREVSMVEGRVSHMEKTCSKLDSIS 720
HPVAHCCSQLEERWQRLQSQVISELDACKECTQGVQREVSMVEGRVSHMEKTCSKLDSIS
Sbjct: 661 HPVAHCCSQLEERWQRLQSQVISELDACKECTQGVQREVSMVEGRVSHMEKTCSKLDSIS 720
Query: 721 GNLQRIKEGLNKHVSSLWNCVRQMNGTLRSHSRDISGLKNSVQQFYSHVFQISTDLQDLV 780
GNLQRIKEGLNKHVSSLWNCVRQMNGTLRSHSRDISGLKNSVQQFYSHVFQISTDLQDLV
Sbjct: 721 GNLQRIKEGLNKHVSSLWNCVRQMNGTLRSHSRDISGLKNSVQQFYSHVFQISTDLQDLV 780
Query: 781 KFQPSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPG 840
KFQPSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPG
Sbjct: 781 KFQPSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPG 840
Query: 841 STGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGA 900
STGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGA
Sbjct: 841 STGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGA 900
Query: 901 PVPSLVSFSAGLTQKPFPSDGGVVLFNKVLVNDGDVYNPSTGVFTAPYDGRYLITATLTP 960
PVPSLVSFSAGLTQKPFPSDGGVVLFNKVLVNDGDVYNPSTGVFTAPYDGRYLITATLTP
Sbjct: 901 PVPSLVSFSAGLTQKPFPSDGGVVLFNKVLVNDGDVYNPSTGVFTAPYDGRYLITATLTP 960
Query: 961 ERDAYVEAVLSVSNASVAQLHTAGYRREFLEYHRPPGALHTCGGPGAFHLIVHLKAGDAV 1020
ERDAYVEAVLSVSNASVAQLHTAGYRREFLEYHRPPGALHTCGGPGAFHLIVHLKAGDAV
Sbjct: 961 ERDAYVEAVLSVSNASVAQLHTAGYRREFLEYHRPPGALHTCGGPGAFHLIVHLKAGDAV 1020
Query: 1021 NVVVTGGKLAHTDFDEMYSTFSGVFLYPFLSHL 1053
NVVVTGGKLAHTDFDEMYSTFSGVFLYPFLSHL
Sbjct: 1021 NVVVTGGKLAHTDFDEMYSTFSGVFLYPFLSHL 1053
>gi|5901944 elastin microfibril interfacer 1 [Homo sapiens]
Length = 1016
Score = 279 bits (714), Expect = 9e-75
Identities = 310/1158 (26%), Positives = 471/1158 (40%), Gaps = 259/1158 (22%)
Query: 9 PRVPWRWALALLALVGAG------------------LCHAGPQPGYPARPSARNKNWCAY 50
PR W L L AG L GPQ RP++R++NWCAY
Sbjct: 3 PRTLWSCYLCCLLTAAAGAASYPPRGFSLYTGSSGALSPGGPQAQIAPRPASRHRNWCAY 62
Query: 51 IVNKNVSCSVLEGSESFIQAQYNCAWNQMPCPSALVYRVNFRPRYVTRYKTVTQLEWRCC 110
+V + VSC + +G E++++ Q CAW Q CP +++YR RPRY YKTVT +EWRCC
Sbjct: 63 VVTRTVSCVLEDGVETYVKYQ-PCAWGQPQCPQSIMYRRFLRPRYRVAYKTVTDMEWRCC 121
Query: 111 PGFRGGDCQEGPKDPVKTLRPTPARPRNSLKKATDNEPSQFSEPRKTLSPTGTAQPSWGV 170
G+ G DC E P L P + PR + A R LS + P G+
Sbjct: 122 QGYGGDDCAE---SPAPALGPASSTPRPLARPA-----------RPNLSGSSAGSPLSGL 167
Query: 171 DPKEGPQELQEKKIQVLEEKVLRLTRTVLDLQSSLAGVSENLKHATQDDASRTRAPGLSS 230
EGP E +K+Q LEE+V LT+ + L+ L G+S L +D R +
Sbjct: 168 G-GEGPGE--SEKVQQLEEQVQSLTKELQGLRGVLQGLSGRL----AEDVQRAVETAFNG 220
Query: 231 QHPKPDTTVSGDTETGQSPGVFNTKESGMKDIKSELAEVKDTLKNKSDKLEELDGKVKGY 290
+ D PG V +TL +L+ LD +V +
Sbjct: 221 RQQPADAAA--------RPG------------------VHETLNEIQHQLQLLDTRVSTH 254
Query: 291 EGQLRQLQEAAQGPTVTMTTNELYQAYVDSKIDALREELMEGMDRKLADLKNSCEYKLTG 350
+ +L L G + + + A S EEL+ ++++L + + C L G
Sbjct: 255 DQELGHLNNHHGGSSSSGGSRAPAPA---SAPPGPSEELLRQLEQRLQESCSVCLAGLDG 311
Query: 351 LQQQCDDYGSSYLGVIELIGEKETSLRKEINNLRARLQEPSAQANCCDSEKNGDIGQQIK 410
++Q + + +L+ E ++ + L + P CC E +G+++
Sbjct: 312 FRRQQQEDRERLRAMEKLLASVE-ERQRHLAGLAVGRRPPQ---ECCSPE----LGRRLA 363
Query: 411 TLDQKIERVAEATRMLNGRLDNEFDRLI----VPEPDVDFDAKWNELDARINVTEKNAEE 466
L+++++ VA + +L+GR E P ++ + L+ R N T +EE
Sbjct: 364 ELERRLDVVAGSVTVLSGRRGTELGGAAGQGGHPPGYTSLASRLSRLEDRFNSTLGPSEE 423
Query: 467 HCFYIEETLRGAING-------EVGDLKQLVDQKIQSLEDRLGSVLLQMTNNTGAELSPP 519
EE+ GA G G L+QL + ++ LG L + +
Sbjct: 424 Q----EESWPGAPGGLSHWLPAARGRLEQL-GGLLANVSGELGGRLDLLEEQVAGAMQAC 478
Query: 520 GAAALPGVSGSGDERVMMELNHLKDKVQVVEDICLLNIQGKPHGMEGALPNREDRAVRDS 579
G G G D +V L+ L+ +V E L G H +E A A + +
Sbjct: 479 GQLC-SGAPGEQDSQVSEILSALERRVLDSEGQLRLVGSGL-HTVEAA-----GEARQAT 531
Query: 580 LHLLKSLNDTMHRKFQETEQTIQKLQQDFSFLYSQLNHTENDVT-----------HLQKE 628
L L+ + + + ++T + + ++L E + +Q+E
Sbjct: 532 LEGLQEVVGRLQDRVDAQDETAAEFTLRLNLTAARLGQLEGLLQAHGDEGCGACGGVQEE 591
Query: 629 MSNCRAGEN---------AGMGRFTKVGEQER---------------TVDTLPSPQHPVA 664
+ R G G G VG R + L V
Sbjct: 592 LGRLRDGVERCSCPLLPPRGPGAGPGVGGPSRGPLDGFSVFGGSSGSALQALQGELSEVI 651
Query: 665 HCCSQLEERWQRLQSQV-----------------ISEL-----DACKECTQGVQREVSMV 702
S L + LQ+ V ISE+ +A + T+ +R +
Sbjct: 652 LSFSSLNDSLNELQTTVEGQGADLADLGATKDRIISEINRLQQEATEHATESEERFRGLE 711
Query: 703 EG------------RVSHMEKTCSKLDSISGNLQRIKEGLNKHVSSLWNCVRQMNGTLRS 750
EG R+ +E C +LD+++G LQ ++EGL++HV+ LW +R+ N T +
Sbjct: 712 EGQAQAGQCPSLEGRLGRLEGVCERLDTVAGGLQGLREGLSRHVAGLWAGLRETNTTSQM 771
Query: 751 HS--------------RDISGLKNSVQQFYSHVFQISTDLQDLVKFQPSAKAPSPPPPAE 796
+ R + L +S+Q + Q+S L+DL P+ +A P PP
Sbjct: 772 QAALLEKLVGGQAGLGRRLGALNSSLQLLEDRLHQLS--LKDLT--GPAGEAGPPGPPG- 826
Query: 797 APKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAG 856
LQ PP P+G PPGS G + G GPP
Sbjct: 827 -----LQ---GPPGPAG------------------------PPGSPGKDGQEGPIGPPGP 854
Query: 857 AGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVPSLVSFSAGLTQKP 916
G +GV+G +P APVP V+FSA L+
Sbjct: 855 QG------EQGVEG--------------------------APAAPVPQ-VAFSAALSLP- 880
Query: 917 FPSDGGVVLFNKVLVNDGDVYNPSTGVFTAPYDGRYLITATLTPERDAYVEAVLSVSNAS 976
S+ G V F++VL+NDG Y+P TGVFTAP GRYL++A LT R VEAVLS SN
Sbjct: 881 -RSEPGTVPFDRVLLNDGGYYDPETGVFTAPLAGRYLLSAVLTGHRHEKVEAVLSRSNQG 939
Query: 977 VAQLHTAGYRREFLEYHRPPGALHTCGGPGAFHLIVHLKAGDAVNVVVTGGKLAHTDFDE 1036
VA++ + GY E LE + + G G F LI+ L+AGD V V + G+LAH+ +E
Sbjct: 940 VARVDSGGYEPEGLENKPVAESQPSPGTLGVFSLILPLQAGDTVCVDLVMGQLAHS--EE 997
Query: 1037 MYSTFSGVFLY--PFLSH 1052
+ FSG LY P L H
Sbjct: 998 PLTIFSGALLYGDPELEH 1015
>gi|45433501 elastin microfibril interfacer 3 [Homo sapiens]
Length = 766
Score = 223 bits (569), Expect = 6e-58
Identities = 206/794 (25%), Positives = 361/794 (45%), Gaps = 99/794 (12%)
Query: 15 WALALLALVGAGLCHAGPQPGYPARPSAR-----------------NKNWCAYIVNKNVS 57
W A+ AL+ P PA P A +K CAY+V++NV+
Sbjct: 9 WLCAVAALLSGAQARGTPLLARPAPPGASRYSLYTTGWRPRLRPGPHKALCAYVVHRNVT 68
Query: 58 CSVLEGSESFIQAQYN-CAWNQMPCPSALVYRVNFRPRYVTRYKTVTQLEWRCCPGFRGG 116
C + EG+ES+++A+Y C W CP + YR RP+Y YKTVT L WRCCPGF G
Sbjct: 69 CILQEGAESYVKAEYRQCRWGPK-CPGTVTYRTVLRPKYKVGYKTVTDLAWRCCPGFTGK 127
Query: 117 DCQEGPKD---PVKTLRPTPARPRNSLKKATDNEPSQFSEPRKTLSPTGTAQPSWGVDPK 173
C E D L P P P L D P S R SP G +
Sbjct: 128 RCPEHLTDHGAASPQLEPEPQIPSGQL----DPGPRPPSYSRAAPSPHG----------R 173
Query: 174 EGPQELQEKKIQVLEEKVLRLTRTVLDLQSSLAGVSENLKHATQDDASR----TRAPGLS 229
+GP L ++++ LE V RL +T +L+G+ A+ +D +R RAP +
Sbjct: 174 KGP-GLFGERLERLEGDVQRLAQT----YGTLSGLV-----ASHEDPNRMTGGPRAPAVP 223
Query: 230 SQHPKPDTTVSGDTETGQSPGVFNTKESGMKDIKSELAEVKDTLKNKSDKLEELDGKVKG 289
+ G + + P + +I S++ EV +TL+ K L+++ G G
Sbjct: 224 VGFGVIPEGLVGPGDRARGP-----LTPPLDEILSKVTEVSNTLQTKVQLLDKVHGLALG 278
Query: 290 YEGQLRQLQEAAQGPTVTMTTNELYQAYVDSKIDALREELMEGMDRKLADLKNSCEYKLT 349
+E L++L+EA P +T+ L + YVD ++ L L++G ++KL +++ C+ ++
Sbjct: 279 HEAHLQRLREAPPSP---LTSLALLEEYVDRRLHRLWGSLLDGFEQKLQGVQSECDLRVQ 335
Query: 350 GLQQQCDDYGSSYLGVIELIGEKETSLRKEINNLRARLQ--EPSAQANCCDSEKNGDIGQ 407
+++QC++ ++ + + + +E +LR+E++ L ++LQ S + +CC + I
Sbjct: 336 EVRRQCEEGQAASRRLHQSLDGRELALRQELSQLGSQLQGLSVSGRGSCCG--QLALINA 393
Query: 408 QIKTLDQKIERVAEATRMLNGRLDNEFDRLIVPEPDVDFDAKWNELDARINVTEKNAEEH 467
++ L++ ++ V E R +E RL + D L+ +N TE A
Sbjct: 394 RMDGLERALQAVTETQRGPGAPAGDELTRLSAAMLEGGVDGLLEGLET-LNGTEGGARGC 452
Query: 468 CFYIEETLRGAINGEVGDLKQLVDQKIQSLEDRLGSVLLQMTNNTGAELSPPGAAALPGV 527
C ++ G VG ++++++QSLE+RL ++ ++++++ + PG +A P V
Sbjct: 453 CLRLDMGGWG-----VGGFGTMLEERVQSLEERLATLAGELSHDSAS----PGRSARPLV 503
Query: 528 SGS----GDERVMMELNHLKDKVQVVEDICLLNIQGKPHGMEGALPNREDRAVRDSLHLL 583
V +E + + D + ++ E L R V LL
Sbjct: 504 QTELAVLEQRLVSLETSCTPSTTSAILDSLVAEVKAWQSRSEALL-----RQVASHAALL 558
Query: 584 KSLNDTMHR-KFQETEQTIQKLQQDFSFLYSQLNHTENDVTHLQKEMSNCRAGENAGMGR 642
+ LN T+ + Q E T LQ + + L LN +T L +S +A +
Sbjct: 559 QQLNGTVAEVQGQLAEGTGSSLQGEITLLKVNLNSVSKSLTGLSDSVSQY---SDAFLAA 615
Query: 643 FTKVGEQERTVDT-LPSPQHPVAHCCSQLE-------------ERWQRLQSQVISELDAC 688
T + E+ER V+ + + Q V+ S+L+ E+ + ++V S L C
Sbjct: 616 NTSLDERERKVEAEVQAIQEQVSSQGSRLQAGHRQVLNLRGELEQLKAGVAKVASGLSRC 675
Query: 689 KECTQGVQREVSMVEGRVSHMEKTCSKLDSISGNLQRIKEGLNKHVSSLWNCVRQMNGTL 748
++ Q +Q V + RV+ +E C +L ++ L + + LW+ V Q+N TL
Sbjct: 676 QDTAQKLQHTVGHFDQRVAQVEGACRRLGLLAAGLDSLPTEPLRPREGLWSHVDQLNRTL 735
Query: 749 RSHSRDISGLKNSV 762
H++DI+ L++ +
Sbjct: 736 AQHTQDIARLRDDL 749
Score = 30.8 bits (68), Expect = 7.0
Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 43/154 (27%)
Query: 668 SQLEERWQRLQSQVIS--------ELDACKECTQGVQREVSMVEGRVSHMEKTCSK---- 715
+ LEER Q L+ ++ + + VQ E++++E R+ +E +C+
Sbjct: 468 TMLEERVQSLEERLATLAGELSHDSASPGRSARPLVQTELAVLEQRLVSLETSCTPSTTS 527
Query: 716 --LDSISGNL---QRIKEGLNKHVSSLWNCVRQMNGT----------------------- 747
LDS+ + Q E L + V+S ++Q+NGT
Sbjct: 528 AILDSLVAEVKAWQSRSEALLRQVASHAALLQQLNGTVAEVQGQLAEGTGSSLQGEITLL 587
Query: 748 ---LRSHSRDISGLKNSVQQFYSHVFQISTDLQD 778
L S S+ ++GL +SV Q+ +T L +
Sbjct: 588 KVNLNSVSKSLTGLSDSVSQYSDAFLAANTSLDE 621
>gi|118498339 EMI domain containing 2 [Homo sapiens]
Length = 439
Score = 87.8 bits (216), Expect = 5e-17
Identities = 53/150 (35%), Positives = 72/150 (48%), Gaps = 14/150 (9%)
Query: 29 HAGPQPGY--PARPSARNKNWCAYIVNKNVSCSVLEGSESFIQAQY-NCAWNQMPCPSAL 85
H P+PG P A ++WC + V + VSC V GSE+ +Q Y +C W P P A
Sbjct: 35 HGYPEPGAGSPGSGYASRRHWCHHTVTRTVSCQVQNGSETVVQRVYQSCRW---PGPCAN 91
Query: 86 VYRVNFRPRYVTRYKTVTQLEWRCCPGFRGGDCQEGPKDPVK----TLRPTPARPRNSLK 141
+ R RP Y Y+TVT LEWRCCPGF G +C E + + + R T + L
Sbjct: 92 LVRTLIRPTYRVSYRTVTVLEWRCCPGFTGSNCDEECMNCTRLSDMSERLTTLEAKVLLL 151
Query: 142 KATDNEPSQFSEPRKTLSPTGTAQPSWGVD 171
+A + S P L + P+W D
Sbjct: 152 EAAERP----SSPDNDLPAPESTPPTWNED 177
Score = 60.1 bits (144), Expect = 1e-08
Identities = 52/156 (33%), Positives = 63/156 (40%), Gaps = 19/156 (12%)
Query: 774 TDLQDLVKFQPSAKAPSPPP---PAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRP 830
T L+ V +A+ PS P PA P E P A RRP P P
Sbjct: 142 TTLEAKVLLLEAAERPSSPDNDLPAPESTPPTWNEDFLPDAIPLAHPVPRQRRPTGPAGP 201
Query: 831 PEERPPQ----PPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGA 886
P + P PPGS G +TG+ GP G+ G PRG+ G+ G PG G AG
Sbjct: 202 PGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAGN 261
Query: 887 PGYPKSPPVASPGAPVPSLVSFSAGLTQKPFPSDGG 922
PG SP +P +L S Q P D G
Sbjct: 262 PG-------PSPNSPQGALYSL-----QPPTDKDNG 285
Score = 51.2 bits (121), Expect = 5e-06
Identities = 38/117 (32%), Positives = 46/117 (39%), Gaps = 13/117 (11%)
Query: 783 QPSAKAPSPPPPAEAPKEPL-----QPEPAPPRPSGPATAEDPGRRPVLPQ------RPP 831
Q K P+ PP P P P PP P GPA +PG P PQ +PP
Sbjct: 222 QTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPPGPAG--NPGPSPNSPQGALYSLQPP 279
Query: 832 EERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPG 888
++ I +T AG P G G P G G G PG++G AG G
Sbjct: 280 TDKDNGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERG 336
Score = 38.1 bits (87), Expect = 0.044
Identities = 34/102 (33%), Positives = 37/102 (36%), Gaps = 35/102 (34%)
Query: 789 PSPPPPAEAPKEPLQPEPAPPRPSG------PATAEDPG-------------------RR 823
P PP PA P P+P P G P T +D G R
Sbjct: 253 PGPPGPAG------NPGPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAGVPGPRG 306
Query: 824 PVLPQRPPEER-PPQP---PGSTGVIAETGQAGPPAGAGVSG 861
P P PP R PP P PGS G+ E G GP GV G
Sbjct: 307 PPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGPSGEPGVKG 348
>gi|45269141 multimerin 1 [Homo sapiens]
Length = 1228
Score = 83.6 bits (205), Expect = 9e-16
Identities = 198/1004 (19%), Positives = 370/1004 (36%), Gaps = 142/1004 (14%)
Query: 41 SARNKNWCAYIVNKNVSCSVLEGSESFIQAQYN-CAWNQMPCPSALVYRVNFRPRYVTRY 99
+ R KNWCAY+ + +L+ +++ C W CP N P Y ++
Sbjct: 204 TTRGKNWCAYVHTRLSPTVILDNQVTYVPGGKGPCGWTGGSCPQRSQKISN--PVYRMQH 261
Query: 100 KTVTQLEWRCCPGFRGGDCQEGPKDPVKTLRPTPARPRNSLKKATDNEPSQFSEPRKTLS 159
K VT L+WRCCPG+ G CQ ++ + A ++ + + Q
Sbjct: 262 KIVTSLDWRCCPGYSGPKCQLRAQEQQSLIHTNQAESHTAVGRGVAEQQQQ--------- 312
Query: 160 PTGTAQPSWGVDPKEGPQ-ELQEKKIQVLEEKVLRLTRTVLDLQSSLAGVSENLKHATQD 218
G P V K Q Q K+ +L++K+ ++ TV D++++ + +L+ +
Sbjct: 313 -QGCGDPE--VMQKMTDQVNYQAMKLTLLQKKIDNISLTVNDVRNTYS----SLEGKVSE 365
Query: 219 DASRTRAPGLSSQHPKPDTTVSGDTETGQSPGVFNTKESGMKDIKSELAEVKDTLKNKSD 278
D SR L K + D Q N + + + ++ + + L++
Sbjct: 366 DKSREFQSLLKGLKSKSINVLIRDIVREQFKIFQNDMQETVAQLFKTVSSLSEDLESTRQ 425
Query: 279 KLEELDGKVKGYEGQLRQLQEAAQGPTVTMTTNELYQAYVDSKIDALREELMEGMDRKLA 338
+++++ V Q + + PT+T + + I +R+E+ ++ +
Sbjct: 426 IIQKVNESVVSIAAQQKFVLVQENRPTLTDIVE------LRNHIVNVRQEMTLTCEKPIK 479
Query: 339 DLKNSCEYKLTGLQQQCDDYGSSYLGVIELIGEKETSLRKEINNLRARLQEPSAQANCCD 398
+L E K T L+ + S + E + K S KE++ ++ S Q N
Sbjct: 480 EL----EVKQTHLEGALEQEHSRSILYYESL-NKTLSKLKEVHEQLLSTEQVSDQKNAPA 534
Query: 399 SEK-NGDIGQQIKTLDQKIERVAEATRMLNGRLDNEFDRLIVPEPDVDFDAKWNELDARI 457
+E + ++ + + TL + I++ ++ ML D + V + + L
Sbjct: 535 AESVSNNVTEYMSTLHENIKK--QSLMMLQMFEDLHIQESKINNLTVSLEMEKESLRGEC 592
Query: 458 -NVTEKNAEEHCFYIEETLRG--AINGEVGDLKQLVDQKIQSLEDRLGSV-----LLQMT 509
++ K + F +++T +N + ++ +D K+ + ++L + +LQ
Sbjct: 593 EDMLSKCRNDFKFQLKDTEENLHVLNQTLAEVLFPMDNKMDKMSEQLNDLTYDMEILQPL 652
Query: 510 NNTGAEL------SPPGAAALPGVSGSGDERVMMELNHLKDKVQVVEDICLLNIQGKPHG 563
GA L P A + + LN + ++ ++ +QG+
Sbjct: 653 LEQGASLRQTMTYEQPKEAIVIRKKIENLTSAVNSLNFIIKELTKRHNLLRNEVQGRDDA 712
Query: 564 MEGALPN-----------------------REDRAVRDSLHLLKSLNDTMHRKFQETEQT 600
+E + +++ A++++L +K N +H K +T
Sbjct: 713 LERRINEYALEMEDGLNKTMTIINNAIDFIQDNYALKETLSTIKD-NSEIHHKCTSDMET 771
Query: 601 IQKLQQDFSFLYSQLNHTEND------VTHLQKEMSNCRAGENAGMGRFTKVGEQ-ERTV 653
I F L + ND V + K ++ E F K+ + T
Sbjct: 772 ILTFIPQFHRLNDSIQTLVNDNQRYNFVLQVAKTLAGIPRDEKLNQSNFQKMYQMFNETT 831
Query: 654 DTLPSPQHPVAHCCSQL----------EERWQRLQSQVISEL-----------DACKECT 692
+ Q ++H +L E R Q ++S+V L E
Sbjct: 832 SQVRKYQQNMSHLEEKLLLTTKISKNFETRLQDIESKVTQTLIPYYISVKKGSVVTNERD 891
Query: 693 QGVQREVSMVEGRVSHMEKTCSKLDSISGNLQRIKEGLNKHVSSLWNC---VRQMNGTLR 749
Q +Q +V + R +E +K +S N + + L++ ++ N V ++N T+
Sbjct: 892 QALQLQV--LNSRFKALE---AKSIHLSINFFSLNKTLHEVLTMCHNASTSVSELNATIP 946
Query: 750 ---SHS-RDISGLKNSVQQFYSHVFQISTDLQDLVKFQPSAKAPSPPPPAEAPKEPLQPE 805
HS DI L+ + +F + QI T L P A K Q +
Sbjct: 947 KWIKHSLPDIQLLQKGLTEFVEPIIQIKTQAA-LSNLTCCIDRSLPGSLANVVKSQKQVK 1005
Query: 806 PAP------PRPSGPATAEDPGRRPVLPQRPPEE--RPPQPPGSTGVIAETGQAGPPAGA 857
P +P+ T GR QR + P + + + G G
Sbjct: 1006 SLPKKINALKKPTVNLTTVLIGR----TQRNTDNIIYPEEYSSCSRHPCQNG------GT 1055
Query: 858 GVSGRGLPRGVDGQTGSG---TVPGAEGFAGAPGYPKSPPVASPGAPVPSLVSFSAGLTQ 914
++GR +G T+ E A AP + K +P V S + G+T
Sbjct: 1056 CINGRTSFTCACRHPFTGDNCTIKLVEENALAPDFSKGSYRYAP--MVAFFASHTYGMTI 1113
Query: 915 KPFPSDGGVVLFNKVLVNDGDVYNPSTGVFTAPYDGRYLITATL 958
G +LFN + VN G Y P TG F PY G Y+ T+
Sbjct: 1114 P------GPILFNNLDVNYGASYTPRTGKFRIPYLGVYVFKYTI 1151
>gi|154937344 complement component 1, q subcomponent-like 2 [Homo
sapiens]
Length = 287
Score = 82.4 bits (202), Expect = 2e-15
Identities = 87/271 (32%), Positives = 113/271 (41%), Gaps = 35/271 (12%)
Query: 784 PSAKAPSPPPPAEAPKEPLQ---PEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPG 840
P AKA PP P+ A E +Q P PP GP DPGR P +P PP PG
Sbjct: 45 PGAKA-QPPGPSTAALEVMQDLSANPPPPFIQGP--KGDPGR----PGKPGPRGPPGEPG 97
Query: 841 STGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAG-APGYPKSPPVASPG 899
G G+ G G+ G L G +G G V G G G + G S A+
Sbjct: 98 PPGPRGPPGEKGDSGRPGLPGLQLTAGT--ASGVGVVGGGAGVGGDSEGEVTSALSATFS 155
Query: 900 APVPSLVSFSAGLTQKPFPSDGGVVL-FNKVLVNDGDVYNPSTGVFTAPYDGRYLIT-AT 957
P ++F GL P +G VL F+ V+ N G+ Y+P+TG F+ G Y T
Sbjct: 156 GP---KIAFYVGLKS---PHEGYEVLKFDDVVTNLGNHYDPTTGKFSCQVRGIYFFTYHI 209
Query: 958 LTPERDAYVEAVLSVSNASVAQLHTAGYRREFLEYHRPPGALHTCGGPGAFHLIVHLKAG 1017
L D N V A + +Y + +++HL +G
Sbjct: 210 LMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDY-------------ASNSVVLHLDSG 256
Query: 1018 DAVNVVVTGGKLAHTDFDEMYSTFSGVFLYP 1048
D V V + GGK AH + YSTFSG LYP
Sbjct: 257 DEVYVKLDGGK-AHGGNNNKYSTFSGFLLYP 286
>gi|50511941 EMI domain containing 1 [Homo sapiens]
Length = 443
Score = 81.3 bits (199), Expect = 5e-15
Identities = 45/110 (40%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 12 PWRWALALLALVGAGLCHAGPQPGYPARPSARNKNWCAYIVNKNVSCSVLEGSESFIQ-A 70
P WAL L L+ G G A P + +NWC+Y+V + +SC V G+ ++Q
Sbjct: 4 PRAWALLCLGLLLPG---GGAAWSIGAAPFSGRRNWCSYVVTRTISCHVQNGT--YLQRV 58
Query: 71 QYNCAWNQMPCPSALVYRVNFRPRYVTRYKTVTQLEWRCCPGFRGGDCQE 120
NC W M CP + YR RP Y YK VT EWRCCPG G C+E
Sbjct: 59 LQNCPW-PMSCPGSS-YRTVVRPTYKVMYKIVTAREWRCCPGHSGVSCEE 106
Score = 57.0 bits (136), Expect = 9e-08
Identities = 45/135 (33%), Positives = 49/135 (36%), Gaps = 28/135 (20%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAE-----DP-------------GRRPV 825
P + P PP P P PP P GP A DP + P
Sbjct: 243 PGERGPPGPPGPPGP-------PGPPAPVGPPHARISQHGDPLLSNTFTETNNHWPQGPT 295
Query: 826 LPQRPPEER-PPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFA 884
P PP PP PPG TGV G GPP G G G G+ G PG +G A
Sbjct: 296 GPPGPPGPMGPPGPPGPTGVPGSPGHIGPPGPTGPKGISGHPGEKGERGLRGEPGPQGSA 355
Query: 885 GAPGYPKSPPVASPG 899
G G P P PG
Sbjct: 356 GQRGEP--GPKGDPG 368
Score = 48.1 bits (113), Expect = 4e-05
Identities = 35/110 (31%), Positives = 43/110 (39%), Gaps = 13/110 (11%)
Query: 809 PRPSGPATAEDPGRRPVLPQRPPEERPPQP-----------PGSTGVIAETGQAGPPAGA 857
P P PAT EDP P+ P + P PG TG + G GP
Sbjct: 165 PVPPTPATPEDPA--PLWGPPPAQGSPGDGGLQDQVGAWGLPGPTGPKGDAGSRGPMGMR 222
Query: 858 GVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVPSLVS 907
G G P G G+ G+ PG G G PG P P +P P + +S
Sbjct: 223 GPPGPQGPPGSPGRAGAVGTPGERGPPGPPGPPGPPGPPAPVGPPHARIS 272
Score = 42.0 bits (97), Expect = 0.003
Identities = 50/169 (29%), Positives = 57/169 (33%), Gaps = 44/169 (26%)
Query: 784 PSAKAP--SPPPPAEAPKEP-LQPE------PAPPRPSGPATAEDPG--RRPVLPQRPP- 831
P AP PPP +P + LQ + P P P G A + P R P PQ PP
Sbjct: 173 PEDPAPLWGPPPAQGSPGDGGLQDQVGAWGLPGPTGPKGDAGSRGPMGMRGPPGPQGPPG 232
Query: 832 ------------EERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLP-------------- 865
E PP PPG G GPP A +S G P
Sbjct: 233 SPGRAGAVGTPGERGPPGPPGPPGPPGPPAPVGPPH-ARISQHGDPLLSNTFTETNNHWP 291
Query: 866 ---RGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVPSLVSFSAG 911
G G G PG G G PG P + PG P +S G
Sbjct: 292 QGPTGPPGPPGPMGPPGPPGPTGVPGSPGH--IGPPGPTGPKGISGHPG 338
Score = 34.3 bits (77), Expect = 0.63
Identities = 26/77 (33%), Positives = 29/77 (37%), Gaps = 7/77 (9%)
Query: 789 PSPPPPAEAPKEPLQPEPAPPRPSGP-ATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAE 847
P PP P P P PP P+GP + PG + R P P GS G E
Sbjct: 307 PGPPGPTGVPGSP--GHIGPPGPTGPKGISGHPGEKGERGLRGE----PGPQGSAGQRGE 360
Query: 848 TGQAGPPAGAGVSGRGL 864
G G P G GL
Sbjct: 361 PGPKGDPGEKSHWGEGL 377
>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
Length = 703
Score = 78.2 bits (191), Expect = 4e-14
Identities = 60/175 (34%), Positives = 76/175 (43%), Gaps = 14/175 (8%)
Query: 783 QPSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGR-RPVLPQRPPEERPPQPPGS 841
QP + PS P + P P+ P+ P P PG R P PP PGS
Sbjct: 455 QPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGS 514
Query: 842 TGVIAETGQAGPPAGAGVSGRGLPRGVDG-QTGSGTVPGAE-GFAGAP--GYPKSPPVAS 897
G+ G GPP G G G+ G +G V GA G G P G + A+
Sbjct: 515 PGITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHAT 574
Query: 898 PGAPVPSLVSFSAGLTQKPFPSDGGVVLFNKVLVNDGDVYNPSTGVFTAPYDGRY 952
P +F+A LT PFP+ G V F++ L N YNP+TG+FT P G Y
Sbjct: 575 P--------AFTAVLTS-PFPASGMPVKFDRTLYNGHSGYNPATGIFTCPVGGVY 620
Score = 56.2 bits (134), Expect = 2e-07
Identities = 58/187 (31%), Positives = 72/187 (38%), Gaps = 28/187 (14%)
Query: 783 QPSAKAPSPPPPAEAPKE------PLQP-----EPAPPRPSGPATAEDPGRRPVLPQRPP 831
QP K P PP E + PL P EP PP GP P P P +P
Sbjct: 45 QPMQKGPVGPPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGP---PGFPGKPG 101
Query: 832 EERP-----PQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGA 886
+P P P G G + G+AGPP G+ G+ P G G G + G +G G
Sbjct: 102 MGKPGLHGQPGPAGPPG-FSRMGKAGPP---GLPGKVGPPGQPGLRGEPGIRGDQGLRGP 157
Query: 887 PGYPKSP---PVASPGAPVPSLVSFSAGLTQKPFPSDGGVVLFNKVLVNDGDVYNPSTGV 943
PG P P + PG P V G +P P ++ L D V P G+
Sbjct: 158 PGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQP--GL 215
Query: 944 FTAPYDG 950
AP G
Sbjct: 216 PGAPGQG 222
Score = 54.3 bits (129), Expect = 6e-07
Identities = 35/100 (35%), Positives = 42/100 (42%), Gaps = 14/100 (14%)
Query: 802 LQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSG 861
L+ P PP GP+ PG+ P + P PPG G G+ GPP G+ G
Sbjct: 154 LRGPPGPPGLPGPSGITIPGK-------PGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKG 206
Query: 862 RGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP 901
D G +PGA G GAPG P P A G P
Sbjct: 207 -------DNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGKP 239
Score = 53.9 bits (128), Expect = 8e-07
Identities = 36/100 (36%), Positives = 40/100 (40%), Gaps = 3/100 (3%)
Query: 806 PAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLP 865
P PP GPA PG LP P ++ PPG G E G GP GV G G+P
Sbjct: 225 PGPPGLPGPAGLGKPGLDG-LPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVP 283
Query: 866 --RGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVP 903
G+ G G G G G PG PG P P
Sbjct: 284 GAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGP 323
Score = 50.8 bits (120), Expect = 7e-06
Identities = 43/131 (32%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 783 QPSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGST 842
+P A+ PP + P Q EP PP G G+ P LP P + P PPG
Sbjct: 174 KPGAQGVPGPPGFQGEPGP-QGEPGPPGDRGLKGDNGVGQ-PGLPGAPGQGGAPGPPGLP 231
Query: 843 GV--IAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGA 900
G + + G G P G G P GV G G PGA G G PG + G
Sbjct: 232 GPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGE---PGAVGPKGPPGVDGVGVPGAAGL 288
Query: 901 PVPSLVSFSAG 911
P P S + G
Sbjct: 289 PGPQGPSGAKG 299
Score = 47.8 bits (112), Expect = 6e-05
Identities = 47/154 (30%), Positives = 56/154 (36%), Gaps = 25/154 (16%)
Query: 785 SAKAPSPPPPAEAPKEPLQPEP---------APPRPSGPATAEDPGRRPVL--------P 827
+A P P P+ A EP P P GP P P L
Sbjct: 285 AAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGE 344
Query: 828 QRPPEERPPQ----PPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGF 883
P E+ PQ PPG G G+ GPP G +G G P GV G G G G
Sbjct: 345 DGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGD---QGPSGL 401
Query: 884 AGAPGYPKSPPV-ASPGAPVPSLVSFSAGLTQKP 916
AG PG P + + G P P+ G T +P
Sbjct: 402 AGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRP 435
>gi|56606142 complement component 1, q subcomponent-like 4 [Homo
sapiens]
Length = 238
Score = 76.6 bits (187), Expect = 1e-13
Identities = 73/233 (31%), Positives = 97/233 (41%), Gaps = 31/233 (13%)
Query: 819 DP-GRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTV 877
DP G R P P PP PPG+ G + G+AG G G PRG G+
Sbjct: 33 DPHGPRGPGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPG---PRGPPGE------ 83
Query: 878 PGAEGFAGAPGYPKSPPVASPGAPVPSLVSFSAGLTQKPFPSDGGVVL-FNKVLVNDGDV 936
PG G G PG P +P A ++F AGL + P +G VL F+ V+ N G+
Sbjct: 84 PGRPGPPGPPG--PGPGGVAPAAGYVPRIAFYAGLRR---PHEGYEVLRFDDVVTNVGNA 138
Query: 937 YNPSTGVFTAPYDGRYLIT-ATLTPERDAYVEAVLSVSNASVAQLHTAGYRREFLEYHRP 995
Y ++G FT P G Y L D + N V A + +Y
Sbjct: 139 YEAASGKFTCPMPGVYFFAYHVLMRGGDGTSMWADLMKNGQVRASAIAQDADQNYDY--- 195
Query: 996 PGALHTCGGPGAFHLIVHLKAGDAVNVVVTGGKLAHTDFDEMYSTFSGVFLYP 1048
+ +I+HL GD V + + GGK+ H YSTFSG +YP
Sbjct: 196 ----------ASNSVILHLDVGDEVFIKLDGGKV-HGGNTNKYSTFSGFIIYP 237
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 76.3 bits (186), Expect = 1e-13
Identities = 66/209 (31%), Positives = 86/209 (41%), Gaps = 43/209 (20%)
Query: 783 QPSAKAPSPPPPAEAPK-EP-LQPEPAPPRPSGPATAED---------PGRRPVLPQRPP 831
+P P P PK +P + P P P GPA A+ P P +P
Sbjct: 393 KPGLDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAPGIPGTRG 452
Query: 832 EERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPK 891
PP PG G + G GPP AG++ +GL +G TG PG G +G PG P
Sbjct: 453 PIGPPGIPGFPGSKGDPGSPGPPGPAGIATKGL----NGPTGPPGPPGPRGHSGEPGLPG 508
Query: 892 SP-PVASPGAPV-----------PSL-----VSFSAGLTQKP-----------FPSDGGV 923
P P PG V PSL VS + G+T P +P+ G
Sbjct: 509 PPGPPGPPGQAVMPEGFIKAGQRPSLSGTPLVSANQGVTGMPVSAFTVILSKAYPAIGTP 568
Query: 924 VLFNKVLVNDGDVYNPSTGVFTAPYDGRY 952
+ F+K+L N Y+P TG+FT G Y
Sbjct: 569 IPFDKILYNRQQHYDPRTGIFTCQIPGIY 597
Score = 61.6 bits (148), Expect = 4e-09
Identities = 46/133 (34%), Positives = 52/133 (39%), Gaps = 19/133 (14%)
Query: 789 PSPPPPAEAPKEP-LQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAE 847
PS PP P LQ EP P P GP+ PG P LP +P E P P G G
Sbjct: 76 PSGPPGKPGYGSPGLQGEPGLPGPPGPSAVGKPGV-PGLPGKPGERGPYGPKGDVGPAGL 134
Query: 848 TGQAGPPAGAGVSG-RGL----------------PRGVDGQTGSGTVPGAEGFAGAPGYP 890
G GPP G+ G G+ PRG G+ G+ VPG G G GY
Sbjct: 135 PGPRGPPGPPGIPGPAGISVPGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYG 194
Query: 891 KSPPVASPGAPVP 903
G P P
Sbjct: 195 APGRPGERGLPGP 207
Score = 53.9 bits (128), Expect = 8e-07
Identities = 45/130 (34%), Positives = 53/130 (40%), Gaps = 19/130 (14%)
Query: 806 PAPPRPSGPATAEDPGRRPV--LPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRG 863
P P P+GP+ G+R +P +P + PG G I G GPP G G G
Sbjct: 205 PGPQGPTGPSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGIG 264
Query: 864 LP--RGVDGQTG-SGT--VPGAEGFAGAPGYP------------KSPPVASPGAPVPSLV 906
P G GQ G GT +PGA G AG PG P + P PG P
Sbjct: 265 KPGAAGAPGQPGIPGTKGLPGAPGIAGPPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGE 324
Query: 907 SFSAGLTQKP 916
AGL KP
Sbjct: 325 QGPAGLPGKP 334
Score = 52.4 bits (124), Expect = 2e-06
Identities = 35/101 (34%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
Query: 803 QPEPAPPRPSGPATAEDPGRRPVLPQ--RPPEERPPQPPGSTGVIAETGQAGPPAGAGVS 860
Q P PP P+GP P P P P + P PG G A G+ G P G
Sbjct: 59 QGTPGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGPSA-VGKPGVPGLPGKP 117
Query: 861 GRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP 901
G P G G G +PG G G PG P ++ PG P
Sbjct: 118 GERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISVPGKP 158
Score = 50.8 bits (120), Expect = 7e-06
Identities = 41/123 (33%), Positives = 48/123 (39%), Gaps = 4/123 (3%)
Query: 784 PSAKAPSPPPPAEAPKEP-LQPEPAPPR-PSGPATAEDPGRRPVLPQRPPEERPPQPPGS 841
P P PP P P L+ E P P GP + G LP +P PP G
Sbjct: 287 PGIAGPPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAG-LPGKPGLTGPPGNMGP 345
Query: 842 TGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP-KSPPVASPGA 900
G G G P G +G P G G G PG++G G PG P P +PG
Sbjct: 346 QGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGL 405
Query: 901 PVP 903
P P
Sbjct: 406 PGP 408
Score = 45.1 bits (105), Expect = 4e-04
Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 844 VIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP 901
V E G GPP AG G P G G+ G G+ PG +G G PG P V PG P
Sbjct: 55 VRGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGS-PGLQGEPGLPGPPGPSAVGKPGVP 111
Score = 42.4 bits (98), Expect = 0.002
Identities = 28/72 (38%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query: 832 EERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPG--AEGFAGAPGY 889
E+ P PPG G G +GPP G G G P G+ G+ G PG A G G PG
Sbjct: 58 EQGTPGPPGPAGPRGHPGPSGPP---GKPGYGSP-GLQGEPGLPGPPGPSAVGKPGVPGL 113
Query: 890 PKSPPVASPGAP 901
P P P P
Sbjct: 114 PGKPGERGPYGP 125
Score = 40.8 bits (94), Expect = 0.007
Identities = 42/162 (25%), Positives = 51/162 (31%), Gaps = 45/162 (27%)
Query: 784 PSAKAPSPPPPAEAPKEPLQP-EPAPPRPSG-PATAEDPGRRPV---------------- 825
P + P PP P P +P P+G P PG +
Sbjct: 135 PGPRGPPGPPGIPGPAGISVPGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYG 194
Query: 826 LPQRPPEERPPQPPGSTGV--------IAET------------------GQAGPPAGAGV 859
P RP E P P G TG E G GPP G
Sbjct: 195 APGRPGERGLPGPQGPTGPSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGP 254
Query: 860 SGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP 901
G P G+ G+ G+ PG G G G P +P +A P P
Sbjct: 255 PGERGPEGI-GKPGAAGAPGQPGIPGTKGLPGAPGIAGPPGP 295
Score = 37.0 bits (84), Expect = 0.098
Identities = 31/98 (31%), Positives = 40/98 (40%), Gaps = 9/98 (9%)
Query: 806 PAPPRPSGPA-TAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGL 864
P P +GPA A PG + P + P PG G+ G G P G G G
Sbjct: 358 PGPKGETGPAGPAGYPGAKGERGS-PGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGG 416
Query: 865 PRGVDGQTGSGTVPGAEGFAGAPGY-PKSPPVASPGAP 901
P G+ G G G G PG+ ++ P +PG P
Sbjct: 417 PPGLPGPVGPA------GAKGMPGHNGEAGPRGAPGIP 448
>gi|13994280 C1q and tumor necrosis factor related protein 7 isoform
b [Homo sapiens]
Length = 289
Score = 75.1 bits (183), Expect = 3e-13
Identities = 58/190 (30%), Positives = 82/190 (43%), Gaps = 21/190 (11%)
Query: 806 PAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSG---- 861
P PP P G + P R LP R + G G G+ GP AG G
Sbjct: 40 PGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGE 99
Query: 862 ---RGL--PRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVPSLVSFSAGLTQKP 916
+G P G G+ G PG +G G G P P V G+ V +FS G+T
Sbjct: 100 TGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKS-AFSVGITTS- 157
Query: 917 FPSDGGVVLFNKVLVNDGDVYNPSTGVFTAPYDGRYLITATLTPERDAYVEAVLSVSNAS 976
+P + ++FNKVL N+G+ YNP+TG F + G Y + +T L+ + +
Sbjct: 158 YPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDIT----------LANKHLA 207
Query: 977 VAQLHTAGYR 986
+ +H YR
Sbjct: 208 IGLVHNGQYR 217
>gi|206597454 C1q and tumor necrosis factor related protein 7
isoform b [Homo sapiens]
Length = 289
Score = 75.1 bits (183), Expect = 3e-13
Identities = 58/190 (30%), Positives = 82/190 (43%), Gaps = 21/190 (11%)
Query: 806 PAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSG---- 861
P PP P G + P R LP R + G G G+ GP AG G
Sbjct: 40 PGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGE 99
Query: 862 ---RGL--PRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVPSLVSFSAGLTQKP 916
+G P G G+ G PG +G G G P P V G+ V +FS G+T
Sbjct: 100 TGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKS-AFSVGITTS- 157
Query: 917 FPSDGGVVLFNKVLVNDGDVYNPSTGVFTAPYDGRYLITATLTPERDAYVEAVLSVSNAS 976
+P + ++FNKVL N+G+ YNP+TG F + G Y + +T L+ + +
Sbjct: 158 YPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDIT----------LANKHLA 207
Query: 977 VAQLHTAGYR 986
+ +H YR
Sbjct: 208 IGLVHNGQYR 217
>gi|206597452 C1q and tumor necrosis factor related protein 7
isoform a [Homo sapiens]
Length = 296
Score = 75.1 bits (183), Expect = 3e-13
Identities = 58/190 (30%), Positives = 82/190 (43%), Gaps = 21/190 (11%)
Query: 806 PAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSG---- 861
P PP P G + P R LP R + G G G+ GP AG G
Sbjct: 47 PGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGE 106
Query: 862 ---RGL--PRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVPSLVSFSAGLTQKP 916
+G P G G+ G PG +G G G P P V G+ V +FS G+T
Sbjct: 107 TGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKS-AFSVGITTS- 164
Query: 917 FPSDGGVVLFNKVLVNDGDVYNPSTGVFTAPYDGRYLITATLTPERDAYVEAVLSVSNAS 976
+P + ++FNKVL N+G+ YNP+TG F + G Y + +T L+ + +
Sbjct: 165 YPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDIT----------LANKHLA 214
Query: 977 VAQLHTAGYR 986
+ +H YR
Sbjct: 215 IGLVHNGQYR 224
>gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 72.8 bits (177), Expect = 2e-12
Identities = 83/300 (27%), Positives = 112/300 (37%), Gaps = 60/300 (20%)
Query: 793 PPAEAPKEPLQPEPAPPR---PSG-PATAEDPGRR--PVLPQRPPEERPPQPPGSTGVIA 846
P EA ++ + P P P G P D G + P +P P PPG G
Sbjct: 460 PKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKG 519
Query: 847 ETGQAGPPAGAGVSGRGL-----PRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASP--- 898
E G GPP G+ G+ P G G G PG G G PG P P V P
Sbjct: 520 EPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPP 579
Query: 899 -----------------------------GAPVPSLVSFSAGLTQKPFPSDGGVVLFNKV 929
G P + +F+A LT PFP G V FNK+
Sbjct: 580 PQGEYLPDMGLGIDGVKPPHAYGAKKGKNGGPAYEMPAFTAELTA-PFPPVGAPVKFNKL 638
Query: 930 LVNDGDVYNPSTGVFTAPYDGRYLITATLTPERDAYVEAVLSVSNASVAQLHTAGYRREF 989
L N YNP TG+FT G Y A + V L +N V + Y++ F
Sbjct: 639 LYNGRQNYNPQTGIFTCEVPGVYYF-AYHVHCKGGNVWVALFKNNEPVMYTYDE-YKKGF 696
Query: 990 LEYHRPPGALHTCGGPGAFHLIVHLKAGDAVNVVVTGGKLAHTDFDE-MYSTFSGVFLYP 1048
L+ + ++ L+ GD V + + + A + ++S+FSG LYP
Sbjct: 697 LD-------------QASGSAVLLLRPGDRVFLQMPSEQAAGLYAGQYVHSSFSGYLLYP 743
Score = 54.3 bits (129), Expect = 6e-07
Identities = 48/151 (31%), Positives = 57/151 (37%), Gaps = 26/151 (17%)
Query: 789 PSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQP--PGSTGVIA 846
P P P P P EP P P G + P P + + + P QP PG G
Sbjct: 280 PGPQGPLGKPGAP--GEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQG 337
Query: 847 ETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGA------------EGFAGAPGYPKSPP 894
G GPP G+ G P G G G G VPGA G G PG P P
Sbjct: 338 LPGLPGPPGLPGIGKPGFP-GPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPG 396
Query: 895 VASPGAPVPSLVSFSAGLTQKPFP-SDGGVV 924
+ P P P + F P P +GG+V
Sbjct: 397 IPGPMGP-PGAIGF-------PGPKGEGGIV 419
Score = 51.2 bits (121), Expect = 5e-06
Identities = 36/100 (36%), Positives = 42/100 (42%), Gaps = 7/100 (7%)
Query: 808 PPRPSGPATAEDPGRRPVLPQRPPEERPPQP--PGSTGVIAETGQAGPPAGAGVSGRGLP 865
PP P G PG + P +P P PG G I G GPP G+ G G P
Sbjct: 262 PPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPP---GIPGIGKP 318
Query: 866 R--GVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVP 903
G+ GQ G G +G G PG P P + PG P P
Sbjct: 319 GQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGP 358
Score = 44.7 bits (104), Expect = 5e-04
Identities = 44/156 (28%), Positives = 55/156 (35%), Gaps = 31/156 (19%)
Query: 783 QPSAKAPSPPP-------PAEAPKEPLQPEPA------PPRPSGPATAEDPGRRPVLPQR 829
+P + P PP P K Q P P P P PG + + Q+
Sbjct: 125 EPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQK 184
Query: 830 --------PPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTG-------- 873
P + PP P G G I + G G P G G P+G+ G G
Sbjct: 185 GEIGPMGIPGPQGPPGPHGLPG-IGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDK 243
Query: 874 SGTVPGAEGFAGAPGYPKSP-PVASPGAPVPSLVSF 908
+PGA G G PG P PV PG P + F
Sbjct: 244 GFGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGF 279
Score = 43.9 bits (102), Expect = 8e-04
Identities = 31/91 (34%), Positives = 36/91 (39%), Gaps = 9/91 (9%)
Query: 809 PRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGV 868
P P GP P LP P P PG G + G GPP G+ G P G
Sbjct: 455 PGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPG---DQGLQGPPGIPGIGGPSGPIGP 511
Query: 869 DGQTGSGTVPGAEGFAGAPGYPKSPPVASPG 899
G +PG +G G PG P P + PG
Sbjct: 512 PG------IPGPKGEPGLPGPPGFPGIGKPG 536
Score = 43.1 bits (100), Expect = 0.001
Identities = 36/119 (30%), Positives = 49/119 (41%), Gaps = 10/119 (8%)
Query: 789 PSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRR----PVLPQRPPEERP-PQPPGSTG 843
P PP PK + P +P PG R P+ P+ ++ P PG G
Sbjct: 421 PQGPP---GPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPG 477
Query: 844 VIAETGQAGPPAGAGVSGR-GLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP 901
++ G+ G P G+ G G+P G+ G +G PG G G PG P P G P
Sbjct: 478 LLGPKGEPGIPGDQGLQGPPGIP-GIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKP 535
Score = 42.7 bits (99), Expect = 0.002
Identities = 40/140 (28%), Positives = 50/140 (35%), Gaps = 10/140 (7%)
Query: 766 YSHVFQISTDLQDLVKFQPSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPV 825
Y H+ Q ++Q + K P E P L+ E P GP P P
Sbjct: 83 YPHLPQYMKEIQPAPRM---GKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGP---PG 136
Query: 826 LPQR--PPEERPPQPPGSTGV--IAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAE 881
LP P + P P G GV G G P G+ G G G+ G +PG +
Sbjct: 137 LPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQ 196
Query: 882 GFAGAPGYPKSPPVASPGAP 901
G G G P PG P
Sbjct: 197 GPPGPHGLPGIGKPGGPGLP 216
Score = 42.4 bits (98), Expect = 0.002
Identities = 41/139 (29%), Positives = 47/139 (33%), Gaps = 29/139 (20%)
Query: 792 PPPAEAPKEPLQPEPAPP--RPSGPATAEDPG----RRPVLPQRPPEERPPQP------P 839
P P+ P P P +P GP PG R P P R P+ P
Sbjct: 189 PMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMP 248
Query: 840 GSTGVIAETGQAGPPAGAGVSGRGLPR-----------------GVDGQTGSGTVPGAEG 882
G+ GV G GPP G+ G G P G G G VPG +G
Sbjct: 249 GAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQG 308
Query: 883 FAGAPGYPKSPPVASPGAP 901
G PG K PG P
Sbjct: 309 PPGIPGIGKPGQDGIPGQP 327
Score = 41.6 bits (96), Expect = 0.004
Identities = 29/93 (31%), Positives = 34/93 (36%)
Query: 809 PRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGV 868
P GP + P P + P E P PG G G GP G+ G P G
Sbjct: 368 PGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGP 427
Query: 869 DGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP 901
G+ G PG GF G G P + P P
Sbjct: 428 KGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGP 460
Score = 41.2 bits (95), Expect = 0.005
Identities = 41/135 (30%), Positives = 50/135 (37%), Gaps = 21/135 (15%)
Query: 787 KAPSPPPPAEAPKEPLQPE-PAPPRPSGPATAED-PGRRP----VLPQRPPEERP----- 835
K P P P P +P P P P GP A PG + V PQ PP +
Sbjct: 377 KGPIGAPGIGGP--PGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQ 434
Query: 836 --PQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAP------ 887
P PG G + G G P G G +GV G G + G +G G P
Sbjct: 435 GFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQ 494
Query: 888 GYPKSPPVASPGAPV 902
G P P + P P+
Sbjct: 495 GPPGIPGIGGPSGPI 509
>gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 72.8 bits (177), Expect = 2e-12
Identities = 83/300 (27%), Positives = 112/300 (37%), Gaps = 60/300 (20%)
Query: 793 PPAEAPKEPLQPEPAPPR---PSG-PATAEDPGRR--PVLPQRPPEERPPQPPGSTGVIA 846
P EA ++ + P P P G P D G + P +P P PPG G
Sbjct: 460 PKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKG 519
Query: 847 ETGQAGPPAGAGVSGRGL-----PRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASP--- 898
E G GPP G+ G+ P G G G PG G G PG P P V P
Sbjct: 520 EPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPP 579
Query: 899 -----------------------------GAPVPSLVSFSAGLTQKPFPSDGGVVLFNKV 929
G P + +F+A LT PFP G V FNK+
Sbjct: 580 PQGEYLPDMGLGIDGVKPPHAYGAKKGKNGGPAYEMPAFTAELTA-PFPPVGAPVKFNKL 638
Query: 930 LVNDGDVYNPSTGVFTAPYDGRYLITATLTPERDAYVEAVLSVSNASVAQLHTAGYRREF 989
L N YNP TG+FT G Y A + V L +N V + Y++ F
Sbjct: 639 LYNGRQNYNPQTGIFTCEVPGVYYF-AYHVHCKGGNVWVALFKNNEPVMYTYDE-YKKGF 696
Query: 990 LEYHRPPGALHTCGGPGAFHLIVHLKAGDAVNVVVTGGKLAHTDFDE-MYSTFSGVFLYP 1048
L+ + ++ L+ GD V + + + A + ++S+FSG LYP
Sbjct: 697 LD-------------QASGSAVLLLRPGDRVFLQMPSEQAAGLYAGQYVHSSFSGYLLYP 743
Score = 54.3 bits (129), Expect = 6e-07
Identities = 48/151 (31%), Positives = 57/151 (37%), Gaps = 26/151 (17%)
Query: 789 PSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQP--PGSTGVIA 846
P P P P P EP P P G + P P + + + P QP PG G
Sbjct: 280 PGPQGPLGKPGAP--GEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQG 337
Query: 847 ETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGA------------EGFAGAPGYPKSPP 894
G GPP G+ G P G G G G VPGA G G PG P P
Sbjct: 338 LPGLPGPPGLPGIGKPGFP-GPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPG 396
Query: 895 VASPGAPVPSLVSFSAGLTQKPFP-SDGGVV 924
+ P P P + F P P +GG+V
Sbjct: 397 IPGPMGP-PGAIGF-------PGPKGEGGIV 419
Score = 51.2 bits (121), Expect = 5e-06
Identities = 36/100 (36%), Positives = 42/100 (42%), Gaps = 7/100 (7%)
Query: 808 PPRPSGPATAEDPGRRPVLPQRPPEERPPQP--PGSTGVIAETGQAGPPAGAGVSGRGLP 865
PP P G PG + P +P P PG G I G GPP G+ G G P
Sbjct: 262 PPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPP---GIPGIGKP 318
Query: 866 R--GVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVP 903
G+ GQ G G +G G PG P P + PG P P
Sbjct: 319 GQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGP 358
Score = 44.7 bits (104), Expect = 5e-04
Identities = 44/156 (28%), Positives = 55/156 (35%), Gaps = 31/156 (19%)
Query: 783 QPSAKAPSPPP-------PAEAPKEPLQPEPA------PPRPSGPATAEDPGRRPVLPQR 829
+P + P PP P K Q P P P P PG + + Q+
Sbjct: 125 EPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQK 184
Query: 830 --------PPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTG-------- 873
P + PP P G G I + G G P G G P+G+ G G
Sbjct: 185 GEIGPMGIPGPQGPPGPHGLPG-IGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDK 243
Query: 874 SGTVPGAEGFAGAPGYPKSP-PVASPGAPVPSLVSF 908
+PGA G G PG P PV PG P + F
Sbjct: 244 GFGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGF 279
Score = 43.9 bits (102), Expect = 8e-04
Identities = 31/91 (34%), Positives = 36/91 (39%), Gaps = 9/91 (9%)
Query: 809 PRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGV 868
P P GP P LP P P PG G + G GPP G+ G P G
Sbjct: 455 PGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPG---DQGLQGPPGIPGIGGPSGPIGP 511
Query: 869 DGQTGSGTVPGAEGFAGAPGYPKSPPVASPG 899
G +PG +G G PG P P + PG
Sbjct: 512 PG------IPGPKGEPGLPGPPGFPGIGKPG 536
Score = 43.1 bits (100), Expect = 0.001
Identities = 36/119 (30%), Positives = 49/119 (41%), Gaps = 10/119 (8%)
Query: 789 PSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRR----PVLPQRPPEERP-PQPPGSTG 843
P PP PK + P +P PG R P+ P+ ++ P PG G
Sbjct: 421 PQGPP---GPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPG 477
Query: 844 VIAETGQAGPPAGAGVSGR-GLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP 901
++ G+ G P G+ G G+P G+ G +G PG G G PG P P G P
Sbjct: 478 LLGPKGEPGIPGDQGLQGPPGIP-GIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKP 535
Score = 42.7 bits (99), Expect = 0.002
Identities = 40/140 (28%), Positives = 50/140 (35%), Gaps = 10/140 (7%)
Query: 766 YSHVFQISTDLQDLVKFQPSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPV 825
Y H+ Q ++Q + K P E P L+ E P GP P P
Sbjct: 83 YPHLPQYMKEIQPAPRM---GKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGP---PG 136
Query: 826 LPQR--PPEERPPQPPGSTGV--IAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAE 881
LP P + P P G GV G G P G+ G G G+ G +PG +
Sbjct: 137 LPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQ 196
Query: 882 GFAGAPGYPKSPPVASPGAP 901
G G G P PG P
Sbjct: 197 GPPGPHGLPGIGKPGGPGLP 216
Score = 42.4 bits (98), Expect = 0.002
Identities = 41/139 (29%), Positives = 47/139 (33%), Gaps = 29/139 (20%)
Query: 792 PPPAEAPKEPLQPEPAPP--RPSGPATAEDPG----RRPVLPQRPPEERPPQP------P 839
P P+ P P P +P GP PG R P P R P+ P
Sbjct: 189 PMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMP 248
Query: 840 GSTGVIAETGQAGPPAGAGVSGRGLPR-----------------GVDGQTGSGTVPGAEG 882
G+ GV G GPP G+ G G P G G G VPG +G
Sbjct: 249 GAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQG 308
Query: 883 FAGAPGYPKSPPVASPGAP 901
G PG K PG P
Sbjct: 309 PPGIPGIGKPGQDGIPGQP 327
Score = 41.6 bits (96), Expect = 0.004
Identities = 29/93 (31%), Positives = 34/93 (36%)
Query: 809 PRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGV 868
P GP + P P + P E P PG G G GP G+ G P G
Sbjct: 368 PGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGP 427
Query: 869 DGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP 901
G+ G PG GF G G P + P P
Sbjct: 428 KGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGP 460
Score = 41.2 bits (95), Expect = 0.005
Identities = 41/135 (30%), Positives = 50/135 (37%), Gaps = 21/135 (15%)
Query: 787 KAPSPPPPAEAPKEPLQPE-PAPPRPSGPATAED-PGRRP----VLPQRPPEERP----- 835
K P P P P +P P P P GP A PG + V PQ PP +
Sbjct: 377 KGPIGAPGIGGP--PGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQ 434
Query: 836 --PQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAP------ 887
P PG G + G G P G G +GV G G + G +G G P
Sbjct: 435 GFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQ 494
Query: 888 GYPKSPPVASPGAPV 902
G P P + P P+
Sbjct: 495 GPPGIPGIGGPSGPI 509
>gi|18641360 collectin sub-family member 12 [Homo sapiens]
Length = 742
Score = 72.4 bits (176), Expect = 2e-12
Identities = 90/401 (22%), Positives = 145/401 (36%), Gaps = 81/401 (20%)
Query: 584 KSLNDTMHRKFQETEQTIQKLQQDFSFLYSQLNHTENDVTHLQKEMSNCR--AGENAGMG 641
++L + R +T Q IQ+++ DF L + D L++++ + + A N+ +
Sbjct: 217 RNLITNLQRSVDDTSQAIQRIKNDFQNLQQVFLQAKKDTDWLKEKVQSLQTLAANNSALA 276
Query: 642 RFTKVGEQERTVDTLPSPQHPVAHCCSQLEE--RWQRLQSQVISEL-DACKECTQGVQRE 698
+ DTL + Q+E + Q + +L D K+ +
Sbjct: 277 KANN--------DTLEDMNSQLNSFTGQMENITTISQANEQNLKDLQDLHKDAENRTAIK 328
Query: 699 VSMVEGR-----------VSHMEKTCSKLDSISGNLQRIK----EGLNKHVSSLWNCVRQ 743
+ +E R +S++ T L +++ NL ++ + L KH L +
Sbjct: 329 FNQLEERFQLFETDIVNIISNISYTAHHLRTLTSNLNEVRTTCTDTLTKHTDDLTS---- 384
Query: 744 MNGTLRSHSRDISGLKNSVQQFYSH----VFQISTDLQDL----------------VKFQ 783
+N TL + D L+ S V +S ++++ ++
Sbjct: 385 LNNTLANIRLDSVSLRMQQDLMRSRLDTEVANLSVIMEEMKLVDSKHGQLIKNFTILQGP 444
Query: 784 PSAKAP-----SPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEER---- 834
P + P S PP + + E P P GPA R P+ P PP ER
Sbjct: 445 PGPRGPRGDRGSQGPPGPTGNKGQKGEKGEPGPPGPAGE----RGPIGPAGPPGERGGKG 500
Query: 835 ------------PPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEG 882
P PG G + G GPP G+ G P G G G+ PG G
Sbjct: 501 SKGSQGPKGSRGSPGKPGPQGPSGDPGPPGPPGKEGLPGPQGPPGFQGLQGTVGEPGVPG 560
Query: 883 FAGAPGYPKSP----PVASPGAPVPSLVSFSAGLTQKPFPS 919
G PG P P P PG P PS L +P P+
Sbjct: 561 PRGLPGLPGVPGMPGPKGPPGPPGPSGAVVPLALQNEPTPA 601
>gi|94818738 C1q and tumor necrosis factor related protein 2 [Homo
sapiens]
Length = 330
Score = 69.7 bits (169), Expect = 1e-11
Identities = 74/274 (27%), Positives = 108/274 (39%), Gaps = 36/274 (13%)
Query: 779 LVKFQPSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQP 838
LV P + P PP A P + P + D G + P
Sbjct: 79 LVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRG----------DSGEEGP 128
Query: 839 PGSTGVIAETGQAGPPAGAGVSGRGLPRG---VDGQTGSGTVPGAEGFAGAPGYPKSPPV 895
PG TG G+ GP AG GR PRG V+G G PG +G G G P P
Sbjct: 129 PGRTG---NRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGP 185
Query: 896 ASPGAPVPSLVSFSAGLTQKPFPSDGGVVLFNKVLVNDGDVYNPSTGVFTAPYDGRYLIT 955
S G+ + +FS +T K +P + + F+K+L+N+G YN S+G F G Y T
Sbjct: 186 CSCGSG-HTKSAFSVAVT-KSYPRERLPIKFDKILMNEGGHYNASSGKFVCGVPGIYYFT 243
Query: 956 ATLTPERDAYVEAVLSVSNASVAQLHTAGYRREFLEYHRPPGALHTCGGPGAFHLIVHLK 1015
+T L+ + ++ +H YR + G G I+ LK
Sbjct: 244 YDIT----------LANKHLAIGLVHNGQYR--IRTFDANTGNHDVASG----STILALK 287
Query: 1016 AGDAVNVVVTGGKLAHTDFDEMY--STFSGVFLY 1047
GD V + + + +D + S F+G +Y
Sbjct: 288 QGDEVWLQIFYSEQNGLFYDPYWTDSLFTGFLIY 321
>gi|221316695 multimerin 2 precursor [Homo sapiens]
Length = 949
Score = 68.9 bits (167), Expect = 2e-11
Identities = 92/416 (22%), Positives = 171/416 (41%), Gaps = 51/416 (12%)
Query: 45 KNWCAYIVNKNVSCSVLEGSESF-IQAQYNCAWNQMPCPSALV-YRVNFRPRYVTRYKTV 102
+NWC Y ++K V+ L +E F I +Q C C V YR+ +P Y + K +
Sbjct: 55 RNWCPYPMSKLVTLLALCKTEKFLIHSQQPCPQGAPDCQKVKVMYRMAHKPVYQVKQKVL 114
Query: 103 TQLEWRCCPGFRGGDCQEGPKDPVKTLRPTPARPRNSLKKATDNEPSQFSEPRKTLSPTG 162
T L WRCCPG+ G +C+ + P PA P +S ++ D S P
Sbjct: 115 TSLAWRCCPGYTGPNCEHHDSMAI----PEPADPGDSHQEPQDGPVS--------FKPGH 162
Query: 163 TAQPSWGVDPKEGPQELQEKKIQVLEEKVLRLTRTVLDLQSSLAGVSENLKHATQDDASR 222
A ++ E QE QE + L+ V R+ ++ L +L G NL A +A++
Sbjct: 163 LAAV---INEVEVQQEQQEHLLGDLQNDVHRVADSLPGLWKALPG---NLTAAVM-EANQ 215
Query: 223 TRAPGLSSQHPKPDTTVSGDTETGQSPGVFNTKESGMKDIKSELAEVKDTLKNKSDKLEE 282
T H PD ++ E P V + I +L + + +
Sbjct: 216 T-------GHEFPDRSL----EQVLLPHVDTFLQVHFSPI---WRSFNQSLHSLTQAIRN 261
Query: 283 LDGKVKGYEGQLRQLQEAAQGPTVTMTTNELYQAYVD---SKIDALREELME-------G 332
L V+ + ++Q++A ++A V ++ LR+++ +
Sbjct: 262 LSLDVEANRQAISRVQDSAVARADFQELGAKFEAKVQENTQRVGQLRQDVEDRLHAQHFT 321
Query: 333 MDRKLADLKNSCEYKLTGLQQQCDDYGSSYLGVIELIGEKETSLRKEINNLRAR---LQE 389
+ R +++L+ + KL L + + G++ V+ G R E ++L+AR LQ
Sbjct: 322 LHRSISELQADVDTKLKRLHKAQEAPGTNGSLVLATPG---AGARPEPDSLQARLGQLQR 378
Query: 390 PSAQANCCDSEKNGDIGQQIKTLDQKIERVAEATRMLNGRLDNEFDRLIVPEPDVD 445
++ + + + ++ ++ + + R + + L D FD++ E V+
Sbjct: 379 NLSELHMTTARREEELQYTLEDMRATLTRHVDEIKELYSESDETFDQISKVERQVE 434
Score = 36.6 bits (83), Expect = 0.13
Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 16/85 (18%)
Query: 874 SGTVPGAEGFAGAPGYPKSPPVASPGAPVPSLVSFSAGLTQKPFPSDGGVVLFNKVLVND 933
+G VPGA G A + G+PV SFS G V FN +N
Sbjct: 808 TGPVPGALGAA----------LWEAGSPVAFYASFSEGTAALQ------TVKFNTTYINI 851
Query: 934 GDVYNPSTGVFTAPYDGRYLITATL 958
G Y P G F AP G YL ++
Sbjct: 852 GSSYFPEHGYFRAPERGVYLFAVSV 876
>gi|5729785 complement component 1, q subcomponent-like 1 [Homo
sapiens]
Length = 258
Score = 67.0 bits (162), Expect = 9e-11
Identities = 78/264 (29%), Positives = 100/264 (37%), Gaps = 49/264 (18%)
Query: 792 PPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVL-----PQ-RPPEERPPQPPGSTGVI 845
P PA P + + G A +E G P PQ +P P PPG G
Sbjct: 34 PYPARGPGAGARTD------GGDALSEQSGAPPPSTLVQGPQGKPGRTGKPGPPGPPGDP 87
Query: 846 AETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVPSL 905
G GPP G G+ P G+ G GSG + A Y P VA
Sbjct: 88 GPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAISTAT-------YTTVPRVA--------- 131
Query: 906 VSFSAGLTQKPFPSDGGVVL-FNKVLVNDGDVYNPSTGVFTAPYDGRYLIT-ATLTPERD 963
F AGL P +G VL F+ V+ N G+ Y+ ++G FT G Y T L D
Sbjct: 132 --FYAGLKN---PHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFTYHVLMRGGD 186
Query: 964 AYVEAVLSVSNASVAQLHTAGYRREFLEYHRPPGALHTCGGPGAFHLIVHLKAGDAVNVV 1023
N V A + +Y + +I+HL AGD V +
Sbjct: 187 GTSMWADLCKNGQVRASAIAQDADQNYDY-------------ASNSVILHLDAGDEVFIK 233
Query: 1024 VTGGKLAHTDFDEMYSTFSGVFLY 1047
+ GGK AH YSTFSG +Y
Sbjct: 234 LDGGK-AHGGNSNKYSTFSGFIIY 256
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 66.2 bits (160), Expect = 2e-10
Identities = 55/169 (32%), Positives = 68/169 (40%), Gaps = 33/169 (19%)
Query: 781 KFQPSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLP-----QRPPEER- 834
K +P P + P+ P P PP P+G + G P LP + P ER
Sbjct: 743 KGEPGGPGADGVPGKDGPRGPTGPI-GPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERG 801
Query: 835 ---PPQPPGSTGVIAETGQ---------------------AGPPAGAGVSGRGLPRGVDG 870
PP P G G + G+ AGPP G+G +G P+GV G
Sbjct: 802 ETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKG 861
Query: 871 QTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVPSLVSFSAGLTQKPFPS 919
+ GS PGA GF GA G P P S G P P S S G P P+
Sbjct: 862 ERGSPGGPGAAGFPGARGLPGPP--GSNGNPGPPGPSGSPGKDGPPGPA 908
Score = 57.0 bits (136), Expect = 9e-08
Identities = 45/138 (32%), Positives = 57/138 (41%), Gaps = 8/138 (5%)
Query: 783 QPSAKAPSPPPPAEAPKEP-LQPEPAPPRPSGPA--TAEDPGRRPVLPQRPP----EERP 835
Q + P PP P+ +P + P P G E G PQ PP E P
Sbjct: 557 QGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGP 616
Query: 836 PQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP-P 894
PPG TG + G GPP G+ G G G+ G PG +G AGAPG P
Sbjct: 617 QGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGD 676
Query: 895 VASPGAPVPSLVSFSAGL 912
+PG P ++ + GL
Sbjct: 677 AGAPGERGPPGLAGAPGL 694
Score = 56.6 bits (135), Expect = 1e-07
Identities = 44/131 (33%), Positives = 48/131 (36%), Gaps = 25/131 (19%)
Query: 792 PPPAEAPKEPLQPEPAPPR---PSGPATAEDPGRR--------------PVLPQRPPEER 834
PP P P P+ P GP A PG R P P ++
Sbjct: 844 PPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDG 903
Query: 835 PPQP------PGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPG 888
PP P PGS GV G AG P G G P G G G + GA G AG PG
Sbjct: 904 PPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPPG 963
Query: 889 YPKSPPVASPG 899
P P SPG
Sbjct: 964 MP--GPRGSPG 972
Score = 56.2 bits (134), Expect = 2e-07
Identities = 35/96 (36%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 806 PAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLP 865
P P P GP P P P + PP PG G +G GPP G SG P
Sbjct: 173 PGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQAG---PSGPPGPPGAIGPSG---P 226
Query: 866 RGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP 901
G DG++G PG G G PG P PG P
Sbjct: 227 AGKDGESGRPGRPGERGLPGPPGI--KGPAGIPGFP 260
Score = 56.2 bits (134), Expect = 2e-07
Identities = 46/124 (37%), Positives = 53/124 (42%), Gaps = 11/124 (8%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSGP-ATAEDPGRRPVLPQRPPEERPPQPPGST 842
P + P+ P K P E P P+GP A +PGR V P P P PG
Sbjct: 488 PGFRGPAGPNGIPGEKGPAG-ERGAPGPAGPRGAAGEPGRDGV-PGGPGMRGMPGSPGGP 545
Query: 843 GVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTV---PGAEGFAGAPGYPKSPPVASPG 899
G G+ GPP G SGR P G G G V PG +G GAPG K+ PG
Sbjct: 546 G---SDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPG--KNGERGGPG 600
Query: 900 APVP 903
P P
Sbjct: 601 GPGP 604
Score = 56.2 bits (134), Expect = 2e-07
Identities = 44/122 (36%), Positives = 54/122 (44%), Gaps = 20/122 (16%)
Query: 789 PSPPPPAEAPKEPLQPEPA-------PPRPSGP-ATAEDPGRRPVLPQRPPEERPPQPPG 840
P PP P+ +P + P PA P SGP A PG + P + PP PG
Sbjct: 890 PGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKG----SPGAQGPPGAPG 945
Query: 841 STGVIAETGQ---AGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVAS 897
G+ TG AGPP G G P+GV G++G PGA G +G G P P
Sbjct: 946 PLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGK---PGANGLSGERGPP--GPQGL 1000
Query: 898 PG 899
PG
Sbjct: 1001 PG 1002
Score = 55.5 bits (132), Expect = 3e-07
Identities = 45/137 (32%), Positives = 53/137 (38%), Gaps = 29/137 (21%)
Query: 788 APSPPPPAEAPKEPLQP-------------------EPAPPRPSGPATAEDPGRRPVLPQ 828
AP P P AP E +P +P PP P P TA PG P
Sbjct: 295 APGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGP--PGTAGFPGS----PG 348
Query: 829 RPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPG 888
E P PGS G + G+ GP AG G P G++G G G G GAPG
Sbjct: 349 AKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPG 408
Query: 889 Y--PKSP--PVASPGAP 901
+ P P + GAP
Sbjct: 409 LMGARGPPGPAGANGAP 425
Score = 53.9 bits (128), Expect = 8e-07
Identities = 43/128 (33%), Positives = 50/128 (39%), Gaps = 14/128 (10%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSG-PATAEDPGRRPVLPQRPP--EERPPQPPG 840
P + + PP E K P P PP +G P PG R L P ++ P PG
Sbjct: 692 PGLRGGAGPPGPEGGKGAAGP-PGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPG 750
Query: 841 STGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP-------KSP 893
+ GV + G GP G G P G G G G PG G AG G P
Sbjct: 751 ADGVPGKDGPRGPTGPIGPPG---PAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPG 807
Query: 894 PVASPGAP 901
P PGAP
Sbjct: 808 PAGFPGAP 815
Score = 53.9 bits (128), Expect = 8e-07
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 16/108 (14%)
Query: 808 PPRPSGPATAEDPGRR--PVLPQRPPEERPPQPPGSTGVIAETGQAGP--PAGA------ 857
P R P D G P P P PP P G G + G++GP PAGA
Sbjct: 1022 PGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAPGPAGS 1081
Query: 858 -GVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVPS 904
G G PRG G+TG G +G G PG P +PG+P P+
Sbjct: 1082 RGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNP-----GAPGSPGPA 1124
Score = 53.5 bits (127), Expect = 1e-06
Identities = 30/72 (41%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 830 PPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGY 889
P E P P G G E G+ G P AG G RG DGQ G PG GF G+PG
Sbjct: 290 PGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGA 349
Query: 890 P-KSPPVASPGA 900
+ P SPG+
Sbjct: 350 KGEVGPAGSPGS 361
Score = 52.8 bits (125), Expect = 2e-06
Identities = 41/116 (35%), Positives = 47/116 (40%), Gaps = 11/116 (9%)
Query: 793 PPAEAPKEPLQPEP-----APPRPSGPATAEDPGRR--PVLPQRPPEERPPQPPGSTGVI 845
PP E K P +P P AP P G A PG R P L P PPG G
Sbjct: 649 PPGENGK-PGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGK 707
Query: 846 AETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP 901
G GPP AG G +G+ G+ G PG +G G PG P + V P
Sbjct: 708 GAAGPPGPPGAAGTPGL---QGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGP 760
Score = 52.0 bits (123), Expect = 3e-06
Identities = 51/169 (30%), Positives = 67/169 (39%), Gaps = 32/169 (18%)
Query: 756 SGLKNSVQQFYSHVFQISTDLQDLVKFQPSAKAPSPP-PPAEA--------------PKE 800
+G +N Q+ S+ + + L + A P PP PP + P E
Sbjct: 146 TGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGE 205
Query: 801 PLQPEPAPPR-------PSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGP 853
P Q P+ P PSGPA + RP RP E P PPG G AG
Sbjct: 206 PGQAGPSGPPGPPGAIGPSGPAGKDGESGRP---GRPGERGLPGPPGI------KGPAGI 256
Query: 854 PAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP-PVASPGAP 901
P G+ G G +G+ G PG +G G PG +P P+ GAP
Sbjct: 257 PGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAP 305
Score = 51.2 bits (121), Expect = 5e-06
Identities = 46/143 (32%), Positives = 52/143 (36%), Gaps = 35/143 (24%)
Query: 791 PPPPAEAPKEPLQP----------------EPAPPRPSGPATAEDPGRRPVLPQRPPEER 834
PP PA P P Q E PP +GP P
Sbjct: 805 PPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGP---------------PGGSG 849
Query: 835 PPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP- 893
P PPG GV E G G P AG G RG+ G GS PG G +G+PG P
Sbjct: 850 PAGPPGPQGVKGERGSPGGPGAAGFPG---ARGLPGPPGSNGNPGPPGPSGSPGKDGPPG 906
Query: 894 PVASPGAPVPSLVSFSAGLTQKP 916
P + GAP VS G +P
Sbjct: 907 PAGNTGAPGSPGVSGPKGDAGQP 929
Score = 50.8 bits (120), Expect = 7e-06
Identities = 36/102 (35%), Positives = 41/102 (40%), Gaps = 4/102 (3%)
Query: 803 QPEPAPPRPSGPATAED---PGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGV 859
Q P PP +G + P P P PP P G+ G G AG P G
Sbjct: 380 QGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGA 439
Query: 860 SGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPV-ASPGA 900
G PRG G+ G VPGA+G G G P P PGA
Sbjct: 440 KGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGA 481
Score = 50.1 bits (118), Expect = 1e-05
Identities = 37/101 (36%), Positives = 42/101 (41%), Gaps = 9/101 (8%)
Query: 838 PPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVAS 897
P G G+ E G AG G +G PRG G+ G VPG G G PG P P S
Sbjct: 493 PAGPNGIPGEKGPAGERGAPGPAG---PRGAAGEPGRDGVPGGPGMRGMPGSPGGP--GS 547
Query: 898 PGAPVPSLVSFSAGLTQKPFPS----DGGVVLFNKVLVNDG 934
G P P +G P PS GV+ F NDG
Sbjct: 548 DGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDG 588
Score = 48.9 bits (115), Expect = 2e-05
Identities = 39/118 (33%), Positives = 45/118 (38%), Gaps = 7/118 (5%)
Query: 806 PAPPRPSGPATAEDPGRRPVLPQRPPEERPPQP---PGSTGVIAETGQAGPPAGAGVSGR 862
P P GP + +P E PP P PG G E G+ G P G+ GR
Sbjct: 965 PGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGR 1024
Query: 863 GLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP-PVASPGAPVPSLVSFSAGLTQKPFPS 919
G G G PGA G APG+P P PV G S AG P P+
Sbjct: 1025 DGSPGGKGDRGENGSPGAPG---APGHPGPPGPVGPAGKSGDRGESGPAGPAGAPGPA 1079
Score = 48.9 bits (115), Expect = 2e-05
Identities = 45/130 (34%), Positives = 47/130 (36%), Gaps = 20/130 (15%)
Query: 791 PPPPAEAPKEPLQ---PEPAPPRPSGPATAED-----PGRRPVLPQRPPEERPPQPPGST 842
P PA AP P P PR T E G R P P P P G
Sbjct: 1069 PAGPAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRG-FPGNPGAPGSPGPAGQQ 1127
Query: 843 GVIAETGQAGP---------PAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP 893
G I G AGP P G SG P G G G+ G+EG G PG P P
Sbjct: 1128 GAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPP 1187
Query: 894 PVASPGAPVP 903
PGAP P
Sbjct: 1188 --GPPGAPGP 1195
Score = 48.5 bits (114), Expect = 3e-05
Identities = 36/118 (30%), Positives = 36/118 (30%), Gaps = 1/118 (0%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTG 843
P P PP P P P P P G P L P PP G G
Sbjct: 599 PGGPGPQGPPGKNGETGPQGP-PGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPG 657
Query: 844 VIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP 901
G AG P G G G G G PG G AG PG A P P
Sbjct: 658 EPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGP 715
Score = 48.5 bits (114), Expect = 3e-05
Identities = 39/115 (33%), Positives = 43/115 (37%), Gaps = 9/115 (7%)
Query: 793 PPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAG 852
PP A L+ PP P G A P P P + P G G G G
Sbjct: 685 PPGLAGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKG 744
Query: 853 PPAGAGVSG-------RGLPRGVDGQTGSGTVPGAEGFAGAPGYPK-SPPVASPG 899
P G G G RG P G G G PG +G GAPG P + P SPG
Sbjct: 745 EPGGPGADGVPGKDGPRG-PTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPG 798
Score = 48.1 bits (113), Expect = 4e-05
Identities = 53/176 (30%), Positives = 64/176 (36%), Gaps = 40/176 (22%)
Query: 778 DLVKFQPSAKAPSPPPP-AEAPKEPLQPEPAPPRP----------SGPATAEDPGRR--P 824
D++ P+P P E QP AP RP P PGR P
Sbjct: 64 DIICDDQELDCPNPEIPFGECCAVCPQPPTAPTRPPNGQGPQGPKGDPGPPGIPGRNGDP 123
Query: 825 VLPQRPPEERPPQPPG-----STGV---------------IAETGQAGPPAGAGVSGRGL 864
+P +P P PPG TG +A G AG P AG G
Sbjct: 124 GIPGQPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPG 183
Query: 865 PRGVDGQTGSGTVPGAEGFAGAPGYP----KSPPVASPGAPVPSLVSFSAGLTQKP 916
P G G GS PG+ G+ G PG P S P PGA PS + G + +P
Sbjct: 184 PPGTSGHPGS---PGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRP 236
Score = 47.8 bits (112), Expect = 6e-05
Identities = 37/104 (35%), Positives = 42/104 (40%), Gaps = 13/104 (12%)
Query: 802 LQPEPAPPRPSG----PATAEDPGR-----RPVLPQR---PPEERPPQPPGSTGVIAETG 849
L E PP P G TA +PGR LP R P + GS G G
Sbjct: 988 LSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPG 1047
Query: 850 QAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP 893
GPP G +G+ RG G G PG G GAPG P+ P
Sbjct: 1048 HPGPPGPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPG-PQGP 1090
Score = 47.4 bits (111), Expect = 7e-05
Identities = 37/109 (33%), Positives = 43/109 (39%), Gaps = 13/109 (11%)
Query: 794 PAEAPKEP-LQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAG 852
PA P P L PP P+G A PG R + PG G E G G
Sbjct: 400 PAGIPGAPGLMGARGPPGPAGANGA--PGLRGGAGE----------PGKNGAKGEPGPRG 447
Query: 853 PPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP 901
AG+ G +G DG+ GS PGA G GA G +P P P
Sbjct: 448 ERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGP 496
Score = 45.8 bits (107), Expect = 2e-04
Identities = 47/130 (36%), Positives = 54/130 (41%), Gaps = 17/130 (13%)
Query: 797 APKEPLQP-EPAPPRPSGPA-TAEDPGRR-PVLPQRPP----EERPPQPPGSTGVIAETG 849
+P P P P PP P GPA + D G P P P P P G G ETG
Sbjct: 1039 SPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRGDKGETG 1098
Query: 850 QAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPV-PSLVSF 908
+ G AG+ G RG G G+ PG+ G AG G SP A P PV PS
Sbjct: 1099 ERG---AAGIKGH---RGFPGNPGA---PGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPG 1149
Query: 909 SAGLTQKPFP 918
G + P P
Sbjct: 1150 KDGTSGHPGP 1159
Score = 43.9 bits (102), Expect = 8e-04
Identities = 34/111 (30%), Positives = 41/111 (36%), Gaps = 7/111 (6%)
Query: 802 LQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSG 861
L E P P GP A RP LP G+ G GQ GPP G +G
Sbjct: 289 LPGENGAPGPMGPRGAPGERGRPGLPGAAGAR------GNDGARGSDGQPGPPGPPGTAG 342
Query: 862 RGLPRGVDGQTGSGTVPGAEGFAGAPGYP-KSPPVASPGAPVPSLVSFSAG 911
G G+ G PG+ G G G P + G P P ++ S G
Sbjct: 343 FPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPG 393
Score = 43.5 bits (101), Expect = 0.001
Identities = 31/104 (29%), Positives = 36/104 (34%), Gaps = 27/104 (25%)
Query: 790 SPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETG 849
+P P A ++ P P P GP P PPG G G
Sbjct: 1117 APGSPGPAGQQGAIGSPGPAGPRGPV------------------GPSGPPGKDGTSGHPG 1158
Query: 850 QAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP 893
GPP PRG G+ GS PG G G PG P +P
Sbjct: 1159 PIGPPG---------PRGNRGERGSEGSPGHPGQPGPPGPPGAP 1193
Score = 40.0 bits (92), Expect = 0.012
Identities = 36/111 (32%), Positives = 38/111 (34%), Gaps = 15/111 (13%)
Query: 782 FQPSAKAPSPPPPAEAPKEPLQPEPAPPR----PSGPATAEDPGRRPVLPQRPPEERPPQ 837
F + AP P PA P PA PR PSGP + P P
Sbjct: 1111 FPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHP---------GPIG 1161
Query: 838 PPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPG 888
PPG G E G G P G G P G G G GA AG G
Sbjct: 1162 PPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGGV--GAAAIAGIGG 1210
>gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo
sapiens]
Length = 1685
Score = 63.9 bits (154), Expect = 7e-10
Identities = 46/126 (36%), Positives = 54/126 (42%), Gaps = 11/126 (8%)
Query: 791 PPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQ 850
PP P +P L+ P P GP PGR P P E PP PG+ G+ E G
Sbjct: 1236 PPGPPGSPGPALEGPKGNPGPQGP-----PGR----PGLPGPEGPPGLPGNGGIKGEKGN 1286
Query: 851 AGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVPSLVSFSA 910
G P G+ G +G G G+ PG G G PG P P PG PS V SA
Sbjct: 1287 PGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVP--GFPGMKGPSGVPGSA 1344
Query: 911 GLTQKP 916
G +P
Sbjct: 1345 GPEGEP 1350
Score = 57.0 bits (136), Expect = 9e-08
Identities = 44/139 (31%), Positives = 50/139 (35%), Gaps = 24/139 (17%)
Query: 791 PPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPE----ERPPQP-------- 838
P P + L P P P GP P P LP P P QP
Sbjct: 1109 PGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGK 1168
Query: 839 PGSTGVIAETGQAGPPAGAGVSGRGLP--RGVDGQTGSGTVPGAEGFAGAPGYPKSP--- 893
PG G+ GQ G P G G P G+ GQ G G +PG G G PG P
Sbjct: 1169 PGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFH 1228
Query: 894 -------PVASPGAPVPSL 905
P PG+P P+L
Sbjct: 1229 GFPGVQGPPGPPGSPGPAL 1247
Score = 54.7 bits (130), Expect = 5e-07
Identities = 41/119 (34%), Positives = 49/119 (41%), Gaps = 12/119 (10%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTG 843
P P PP + L P P GP P P LP + PP PPG G
Sbjct: 773 PKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLP-GIGVQGPPGPPGIPG 831
Query: 844 VIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP-PVASPGAP 901
I + G G P G G P G+D VPG G G+PG P +P P+ PG+P
Sbjct: 832 PIGQPGLHGIPGEKGDPG---PPGLD-------VPGPPGERGSPGIPGAPGPIGPPGSP 880
Score = 54.3 bits (129), Expect = 6e-07
Identities = 43/133 (32%), Positives = 53/133 (39%), Gaps = 26/133 (19%)
Query: 792 PPPAEAPKEPLQP---EPAPPRPSGPATAEDPGRRPVLPQRP----PE-----------E 833
P PA EP QP P PP G + + G P +P P P+ +
Sbjct: 1175 PGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQ 1234
Query: 834 RPPQPPGSTGVIAE-----TGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPG 888
PP PPGS G E G GPP G+ G P G G G+G + G +G G PG
Sbjct: 1235 GPPGPPGSPGPALEGPKGNPGPQGPPGRPGLPG---PEGPPGLPGNGGIKGEKGNPGQPG 1291
Query: 889 YPKSPPVASPGAP 901
P P + P
Sbjct: 1292 LPGLPGLKGDQGP 1304
Score = 52.8 bits (125), Expect = 2e-06
Identities = 43/143 (30%), Positives = 57/143 (39%), Gaps = 10/143 (6%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTG 843
P K PP + P P + +P P P PG P P + PG+ G
Sbjct: 842 PGEKGDPGPPGLDVPGPPGE-RGSPGIPGAPGPIGPPGS----PGLPGKAGASGFPGTKG 896
Query: 844 VIAETGQAGPPAGAGVSGR-GLP--RGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGA 900
+ G GPP G+ GR G+P +G DG G +PG G G+ G P P PG
Sbjct: 897 EMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLP--GPPGP 954
Query: 901 PVPSLVSFSAGLTQKPFPSDGGV 923
P+L+ + P GV
Sbjct: 955 MDPNLLGSKGEKGEPGLPGIPGV 977
Score = 52.4 bits (124), Expect = 2e-06
Identities = 38/130 (29%), Positives = 50/130 (38%), Gaps = 13/130 (10%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTG 843
P + P PP E ++ Q EP G + +P +P P + P PG G
Sbjct: 272 PGIRGPPGPPGGEKGEKGEQGEPGK---RGKPGKDGENGQPGIPGLPGDPGYPGEPGRDG 328
Query: 844 VIAETGQAGPPAGAGV----SGRGLPRGVDGQTGSGTVPGAE------GFAGAPGYPKSP 893
+ G GPP G+ G G+ G G G +PG + G G PG P P
Sbjct: 329 EKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGERGFPGIQGPPGLPGPP 388
Query: 894 PVASPGAPVP 903
A G P P
Sbjct: 389 GAAVMGPPGP 398
Score = 52.0 bits (123), Expect = 3e-06
Identities = 45/123 (36%), Positives = 48/123 (39%), Gaps = 16/123 (13%)
Query: 789 PSPPPPAEAPKEP----LQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGV 844
P P P AP P L+ P PP GP +PG LP P PP PG G
Sbjct: 718 PGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKG--EPGF--ALPGPPG---PPGLPGFKGA 770
Query: 845 IAETGQAGPPAGAGVSGR----GLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGA 900
+ G G P G GR GLP G G G PG G G PG P PG
Sbjct: 771 LGPKGDRGFPGPPGPPGRTGLDGLP-GPKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGI 829
Query: 901 PVP 903
P P
Sbjct: 830 PGP 832
Score = 52.0 bits (123), Expect = 3e-06
Identities = 44/128 (34%), Positives = 56/128 (43%), Gaps = 15/128 (11%)
Query: 784 PSAKAPSPPPPAEAPK-EP-LQPEPAPPRPSGPA--------TAEDPG--RRPVLPQRPP 831
P K PS P + P+ EP L P PP GP+ A PG +P L P
Sbjct: 1332 PGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPG 1391
Query: 832 EERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTV---PGAEGFAGAPG 888
+ P PG TG + G+ G P G GR G+ GQ G+ + PG +G G PG
Sbjct: 1392 PQGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPG 1451
Query: 889 YPKSPPVA 896
P + VA
Sbjct: 1452 PPGTSSVA 1459
Score = 51.6 bits (122), Expect = 4e-06
Identities = 47/158 (29%), Positives = 54/158 (34%), Gaps = 51/158 (32%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPE---------PAPP----RPSGPATAEDPGRRPVLPQRP 830
P A PP P P E Q P PP +P P PG P P P
Sbjct: 388 PGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPG--PAGPHIP 445
Query: 831 PEER-----PPQPPGS-------------------------TGVIAETGQAG------PP 854
P + PP PPGS TG+ GQ G PP
Sbjct: 446 PSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPP 505
Query: 855 AGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKS 892
G G+ +G G TG +PG G GAPG+P S
Sbjct: 506 GSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGS 543
Score = 51.6 bits (122), Expect = 4e-06
Identities = 46/137 (33%), Positives = 56/137 (40%), Gaps = 26/137 (18%)
Query: 789 PSPPPPAE-----APKEPLQPE-PAPPRPSGPATAE----DPGRRPVLPQRPPEERPPQP 838
P PP P + + E +P P P SGP + DPG+ P L +P PP P
Sbjct: 949 PGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQ-PGLSGQPGLPGPPGP 1007
Query: 839 PGSTGVIAETGQAGPPA------------GAGVSGRGLPRGVDGQTGSGTVPGAEGFAGA 886
G+ G+ + G GPP GV G P GV GQ GS PG G G
Sbjct: 1008 KGNPGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGS---PGLPGQKGD 1064
Query: 887 PGYPKSPPVASPGAPVP 903
G P + PG P P
Sbjct: 1065 KGDPGISSIGLPGLPGP 1081
Score = 51.2 bits (121), Expect = 5e-06
Identities = 47/149 (31%), Positives = 54/149 (36%), Gaps = 16/149 (10%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSG----PATAEDPGRRPVLPQRPPEERPPQP- 838
P P PP K P PP P G P PG P LP P + P P
Sbjct: 62 PGFPGPEGPPGPRGQKGD-DGIPGPPGPKGIRGPPGLPGFPGT-PGLPGMPGHDGAPGPQ 119
Query: 839 --PGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGS------GTVPGAEGFAGAPGYP 890
PG G E G G P G+ G P G+ G G ++PG +G G PG P
Sbjct: 120 GIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPP 179
Query: 891 KSPPVASP-GAPVPSLVSFSAGLTQKPFP 918
+ P G P P GL P P
Sbjct: 180 GIQGLPGPTGIPGPIGPPGPPGLMGPPGP 208
Score = 50.4 bits (119), Expect = 9e-06
Identities = 39/119 (32%), Positives = 50/119 (42%), Gaps = 12/119 (10%)
Query: 791 PPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPV-LPQRP-PEERPPQP--PGSTGVIA 846
PP P+ P +P +P P DPG + LP P P+ P P PG+ G+
Sbjct: 1043 PPGPSGVPGQP----GSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKG 1098
Query: 847 ETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP----PVASPGAP 901
G G P G G G+ G G+ PG +G +G PG P P PV G P
Sbjct: 1099 SVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHP 1157
Score = 50.4 bits (119), Expect = 9e-06
Identities = 34/97 (35%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
Query: 808 PPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETG---QAGPPAGAGVSGRGL 864
P P P T G+ P LP P PP P G +G G + GP G G G+
Sbjct: 1103 PGLPGLPGTPGAKGQ-PGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPG 1161
Query: 865 PRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP 901
P G G+ G +PG G G PG P PG P
Sbjct: 1162 PPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLP 1198
Score = 50.4 bits (119), Expect = 9e-06
Identities = 44/132 (33%), Positives = 50/132 (37%), Gaps = 13/132 (9%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQP----- 838
P SP P E PK P+ P RP P PG + + P QP
Sbjct: 1236 PPGPPGSPGPALEGPKGNPGPQGPPGRPGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGL 1295
Query: 839 PGSTGVIAETGQAGPPAGAGVSGR----GLP--RGVDGQTGSGTVPGAEGFAGAPGYPKS 892
PG G G G P G++G GLP G G G VPG+ G G PG
Sbjct: 1296 PGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGL--I 1353
Query: 893 PPVASPGAPVPS 904
P PG P PS
Sbjct: 1354 GPPGPPGLPGPS 1365
Score = 49.3 bits (116), Expect = 2e-05
Identities = 43/130 (33%), Positives = 47/130 (36%), Gaps = 4/130 (3%)
Query: 789 PSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGV--IA 846
P P P P + + P P P D G P P P + P PGS G I
Sbjct: 646 PGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGL-PGDPGLPGQPGLPGIPGSKGEPGIP 704
Query: 847 ETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP-VPSL 905
G GPP G G P G G G + G G G PG P A PG P P L
Sbjct: 705 GIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPGPPGPPGL 764
Query: 906 VSFSAGLTQK 915
F L K
Sbjct: 765 PGFKGALGPK 774
Score = 47.0 bits (110), Expect = 9e-05
Identities = 35/97 (36%), Positives = 39/97 (40%), Gaps = 22/97 (22%)
Query: 824 PVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSG-RGLP-----------RGVDGQ 871
P LP P E PP P G G + G GPP G+ G GLP G DG
Sbjct: 59 PGLPGFPGPEGPPGPRGQKG---DDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGA 115
Query: 872 TGSGTVPGAEGFAGAPGYPKSP-------PVASPGAP 901
G +PG G G G+P SP P PG P
Sbjct: 116 PGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIP 152
Score = 47.0 bits (110), Expect = 9e-05
Identities = 44/143 (30%), Positives = 50/143 (34%), Gaps = 24/143 (16%)
Query: 783 QPSAKA-PSPPPPAEAPKEPLQP--EPAPPRPSG-PATAEDPGRRPVLPQRPPE------ 832
QP A P PP PA P EP PP P G P G + V +
Sbjct: 427 QPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIG 486
Query: 833 ---ERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGY 889
PP PG G+ G G P G G+ G G G PGA GF G+ G
Sbjct: 487 TGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGE 546
Query: 890 P-----------KSPPVASPGAP 901
P + SPGAP
Sbjct: 547 PGDILTFPGMKGDKGELGSPGAP 569
Score = 46.6 bits (109), Expect = 1e-04
Identities = 36/112 (32%), Positives = 45/112 (40%), Gaps = 23/112 (20%)
Query: 793 PPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQ-------RPPEERPPQPPGSTGVI 845
P E ++ LQ P PP G + + +RP+ + P + PP PPG G
Sbjct: 225 PKGEKGEQGLQGPPGPP---GQISEQ---KRPIDVEFQKGDQGLPGDRGPPGPPGIRG-- 276
Query: 846 AETGQAGPPAGA----GVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP 893
GPP G G G RG G+ G PG G G PGYP P
Sbjct: 277 ----PPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEP 324
Score = 46.6 bits (109), Expect = 1e-04
Identities = 42/132 (31%), Positives = 46/132 (34%), Gaps = 23/132 (17%)
Query: 791 PPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQ 850
P P E + E PP P PG + P PP PP P G G+ G
Sbjct: 587 PGPKGEPGGITFKGERGPP--GNPGLPGLPGN--IGPMGPPGFGPPGPVGEKGIQGVAGN 642
Query: 851 AGPPAGAGVSGR-----------GLPR--GVDGQTGSGTVPGAEGFAGAPGYPKS----- 892
G P G G GLP G DG G PG G G PG P S
Sbjct: 643 PGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPG 702
Query: 893 -PPVASPGAPVP 903
P + PG P P
Sbjct: 703 IPGIGLPGPPGP 714
Score = 46.6 bits (109), Expect = 1e-04
Identities = 44/153 (28%), Positives = 56/153 (36%), Gaps = 15/153 (9%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPA-----PPRPSGPATAEDPGRRPVLPQRPPEERP--- 835
P K S PP P P +P P P +P P PG+ + + P
Sbjct: 1130 PGPKGISGPPGN--PGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQP 1187
Query: 836 ----PQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPK 891
P PPG G+ + G G P G G P+G G G V G G G+PG
Sbjct: 1188 GFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPAL 1247
Query: 892 SPPVASPGAPVPSLVSFSAGLTQKP-FPSDGGV 923
P +PG P G P P +GG+
Sbjct: 1248 EGPKGNPGPQGPPGRPGLPGPEGPPGLPGNGGI 1280
Score = 45.8 bits (107), Expect = 2e-04
Identities = 38/119 (31%), Positives = 44/119 (36%), Gaps = 14/119 (11%)
Query: 791 PPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRR--PVLPQRPPEERP------PQPPGST 842
P P E + P PP P P G + P LP P P P PG
Sbjct: 934 PGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQP 993
Query: 843 GVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP 901
G+ + G GPP G GLP GQ G PG +G G G+P V P P
Sbjct: 994 GLSGQPGLPGPPGPKG--NPGLP----GQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGP 1046
Score = 43.5 bits (101), Expect = 0.001
Identities = 38/125 (30%), Positives = 47/125 (37%), Gaps = 14/125 (11%)
Query: 791 PPPPAEAPKEPLQPEPAPPRPSG-----PATAEDPGRR-----PVLPQRPPEERPPQPPG 840
P P ++ + + PP P G P T G + P LP E P G
Sbjct: 321 PGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGERGFPGIQG 380
Query: 841 STGVIAETGQA--GPPAGAGVSGRGLPRGVDGQTGSGTV--PGAEGFAGAPGYPKSPPVA 896
G+ G A GPP G G +G +G G PG +G GAPG P P A
Sbjct: 381 PPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPA 440
Query: 897 SPGAP 901
P P
Sbjct: 441 GPHIP 445
Score = 42.0 bits (97), Expect = 0.003
Identities = 38/114 (33%), Positives = 42/114 (36%), Gaps = 16/114 (14%)
Query: 789 PSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAET 848
P P P P P P P + DPG P LP P + P PG G
Sbjct: 1076 PGLPGPKGEPGLP----GYPGNPGIKGSVGDPGL-PGLPGTPGAKGQPGLPGFPGT---- 1126
Query: 849 GQAGPPAGAGVSGR----GLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASP 898
GPP G+SG GLP G G G G PG G G G P + P
Sbjct: 1127 --PGPPGPKGISGPPGNPGLP-GEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGP 1177
Score = 41.2 bits (95), Expect = 0.005
Identities = 32/97 (32%), Positives = 36/97 (37%), Gaps = 15/97 (15%)
Query: 809 PRPSG-PATAEDPGRR--PVLPQRPPEERPPQPPGSTGVIAETGQA------------GP 853
P P G P G R P P P + PP PPG G+ E G G
Sbjct: 116 PGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGY 175
Query: 854 PAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP 890
P G+ G P G+ G G PG G G PG P
Sbjct: 176 PGPPGIQGLPGPTGIPGPIGPPGPPGLMGPPGPPGLP 212
Score = 39.7 bits (91), Expect = 0.015
Identities = 36/147 (24%), Positives = 50/147 (34%), Gaps = 39/147 (26%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTG 843
P + P PP P P E G +PG+R +P ++ PG G
Sbjct: 263 PGDRGPPGPPGIRGPPGPPGGEKGEKGEQG-----EPGKRG----KPGKDGENGQPGIPG 313
Query: 844 VIAETGQAGPPAGAGVSGR-----------------------------GLPRGVDGQTGS 874
+ + G G P G G+ GLP G+ G+ G
Sbjct: 314 LPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLP-GLPGEKGE 372
Query: 875 GTVPGAEGFAGAPGYPKSPPVASPGAP 901
PG +G G PG P + + PG P
Sbjct: 373 RGFPGIQGPPGLPGPPGAAVMGPPGPP 399
Score = 38.9 bits (89), Expect = 0.026
Identities = 39/125 (31%), Positives = 48/125 (38%), Gaps = 12/125 (9%)
Query: 808 PPRPSG-PATAEDPGRRPVLPQRPPEERP--PQPPGSTGVIAETG---QAGPPAGAGVSG 861
PP P G P +PG + P+ P P PPG G+ TG GPP G+ G
Sbjct: 145 PPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPPGLMG 204
Query: 862 RGLPRGVDGQTGSG--TVPGAEGFAGAPGY--PKSPPVASPGAPVPSLVSFSAGLTQKPF 917
P G+ G G+ G +G G G P PP P V F G +
Sbjct: 205 PPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKG--DQGL 262
Query: 918 PSDGG 922
P D G
Sbjct: 263 PGDRG 267
Score = 37.7 bits (86), Expect = 0.057
Identities = 23/62 (37%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Query: 840 GSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPG 899
G G G G P G G PRG G G PG +G G PG P P +PG
Sbjct: 48 GERGFPGLEGHPGLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFP--GTPG 105
Query: 900 AP 901
P
Sbjct: 106 LP 107
Score = 36.6 bits (83), Expect = 0.13
Identities = 34/125 (27%), Positives = 45/125 (36%), Gaps = 10/125 (8%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTG 843
P K A PK AP P P + +PG P ++ PG+ G
Sbjct: 511 PGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPG 570
Query: 844 VIAETGQAGPPAGAGVSG-RGLPRGVD-----GQTGSGTVPGAEGFAGAPGYPKSPPVAS 897
+ G G G+ G +G P G+ G G+ +PG G G P PP
Sbjct: 571 LPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPGNIG----PMGPPGFG 626
Query: 898 PGAPV 902
P PV
Sbjct: 627 PPGPV 631
Score = 35.8 bits (81), Expect = 0.22
Identities = 39/128 (30%), Positives = 47/128 (36%), Gaps = 22/128 (17%)
Query: 791 PPPPAEAPKEPLQPE----PAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVI- 845
PP P P P P G A A P P +P P P G G I
Sbjct: 492 PPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDIL 551
Query: 846 ------AETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEG------FAGAPGYPKSP 893
+ G+ G P G+ G LP G GQ G +PG +G F G G P +P
Sbjct: 552 TFPGMKGDKGELGSPGAPGLPG--LP-GTPGQDGLPGLPGPKGEPGGITFKGERGPPGNP 608
Query: 894 PVASPGAP 901
+ PG P
Sbjct: 609 GL--PGLP 614
Score = 33.9 bits (76), Expect = 0.83
Identities = 27/89 (30%), Positives = 34/89 (38%), Gaps = 5/89 (5%)
Query: 836 PQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPV 895
P G G+ G GPP G G G+ G G + G G G PG P P +
Sbjct: 53 PGLEGHPGLPGFPGPEGPPGPRGQKGDD---GIPGPPGPKGIRGPPGLPGFPGTPGLPGM 109
Query: 896 -ASPGAPVPSLVSFSAGLT-QKPFPSDGG 922
GAP P + G ++ FP G
Sbjct: 110 PGHDGAPGPQGIPGCNGTKGERGFPGSPG 138
Score = 31.6 bits (70), Expect = 4.1
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 10/60 (16%)
Query: 867 GVDGQTGSGTVPGAEGFAGAPGY--PKSPP--------VASPGAPVPSLVSFSAGLTQKP 916
G+ G+ G PG EG G PG+ P+ PP PG P P + GL P
Sbjct: 42 GIKGEKGERGFPGLEGHPGLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFP 101
>gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo
sapiens]
Length = 1818
Score = 63.5 bits (153), Expect = 1e-09
Identities = 36/100 (36%), Positives = 44/100 (44%)
Query: 791 PPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQ 850
P PP + Q P P P GP + P +P L P + PP PG G E G
Sbjct: 699 PGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGA 758
Query: 851 AGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP 890
GPP G G PRGV G G + G++G G G+P
Sbjct: 759 LGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFP 798
Score = 60.5 bits (145), Expect = 8e-09
Identities = 49/138 (35%), Positives = 56/138 (40%), Gaps = 32/138 (23%)
Query: 789 PSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQ----------P 838
P PP P LQ P PP G E+ P+ P PP R PQ P
Sbjct: 1203 PGPPGPIG-----LQGLPGPPGEKG----ENGDVGPMGPPGPPGPRGPQGPNGADGPQGP 1253
Query: 839 PGSTGVIA------ETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP-- 890
PGS G + E G+AG P G +G G P+G G+ G PGA G GA G P
Sbjct: 1254 PGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGD 1313
Query: 891 -----KSPPVASPGAPVP 903
PV PG P P
Sbjct: 1314 DGPKGNPGPVGFPGDPGP 1331
Score = 60.1 bits (144), Expect = 1e-08
Identities = 47/151 (31%), Positives = 64/151 (42%), Gaps = 17/151 (11%)
Query: 784 PSAKAPSPPP--------PAEAPKEPLQPEPAPPRPSGPATAEDP-GRRPVLPQRPPEER 834
P K P PP P + + Q + PP P G + P G + +R
Sbjct: 942 PGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERG-HPG 1000
Query: 835 PPQPPGSTGV---IAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPG--Y 889
PP PPG G+ + G G P G+SG+ P G+ G G +PGA+G G G
Sbjct: 1001 PPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEG 1060
Query: 890 PKSP--PVASPGAPVPSLVSFSAGLTQKPFP 918
P+ P PV SPG + + GL +P P
Sbjct: 1061 PQGPPGPVGSPGERGSAGTAGPIGLPGRPGP 1091
Score = 59.3 bits (142), Expect = 2e-08
Identities = 42/126 (33%), Positives = 50/126 (39%), Gaps = 9/126 (7%)
Query: 784 PSAKAPSPPPPAEAPKEPLQP-----EPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQP 838
P AK P P + PK P +P PP GPA + G P + PP P
Sbjct: 1305 PGAKGP---PGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGP 1361
Query: 839 PGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP-PVAS 897
G G G+ GPP AG GR +G G+ G+ PG G G G P P
Sbjct: 1362 SGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGL 1421
Query: 898 PGAPVP 903
G P P
Sbjct: 1422 RGIPGP 1427
Score = 58.9 bits (141), Expect = 2e-08
Identities = 53/155 (34%), Positives = 58/155 (37%), Gaps = 37/155 (23%)
Query: 791 PPPPAEAPKE----PLQPE--PAPPRPSGPATAEDPGRRPVL---------PQRPPEERP 835
P PP E + P+ P P P P GP A+ P P P E
Sbjct: 1215 PGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGN 1274
Query: 836 PQPPGSTGV------IAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGY 889
P PPG GV E G+AGPP AG G P G DG G+ PG GF G PG
Sbjct: 1275 PGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGN---PGPVGFPGDPGP 1331
Query: 890 PKSPPVA-------------SPGAPVPSLVSFSAG 911
P P A PG P P S AG
Sbjct: 1332 PGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAG 1366
Score = 58.5 bits (140), Expect = 3e-08
Identities = 42/119 (35%), Positives = 53/119 (44%), Gaps = 17/119 (14%)
Query: 787 KAPSPPPPAEA----PKEPL--QPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPG 840
+A +P PP EA PK + E PP +GP A+ P P ++ P PG
Sbjct: 1271 EAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGP---------PGDDGPKGNPG 1321
Query: 841 STGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP--KSPPVAS 897
G + G G P AG G G +G DG G PG G AG PG P + PP A+
Sbjct: 1322 PVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAA 1380
Score = 52.0 bits (123), Expect = 3e-06
Identities = 44/145 (30%), Positives = 53/145 (36%), Gaps = 17/145 (11%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTG 843
P A+ E P+ P P +P TA G LP RP + PP P G G
Sbjct: 1047 PGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIG----LPGRPGPQGPPGPAGEKG 1102
Query: 844 VIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP----------KSP 893
E G GP GV G P G+ G G PG +G G G P ++
Sbjct: 1103 APGEKGPQGPAGRDGVQG---PVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENG 1159
Query: 894 PVASPGAPVPSLVSFSAGLTQKPFP 918
P PG P AG +P P
Sbjct: 1160 PPGPPGLQGPVGAPGIAGGDGEPGP 1184
Score = 51.6 bits (122), Expect = 4e-06
Identities = 43/126 (34%), Positives = 52/126 (41%), Gaps = 19/126 (15%)
Query: 791 PPPPAEAPKEPLQPEPAPPR--PSGPATAEDPG--RRPVLP-------QRPPEERPPQPP 839
PP P P + +P R P P D G P LP +R P+ PP PP
Sbjct: 581 PPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQG-PPGPP 639
Query: 840 GSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP----KSPPV 895
G G+ E G+ GP G+ G PRG+ G G+ PG G AG G P P
Sbjct: 640 GDDGMRGEDGEIGP---RGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQ 696
Query: 896 ASPGAP 901
PG P
Sbjct: 697 GEPGPP 702
Score = 49.7 bits (117), Expect = 1e-05
Identities = 42/133 (31%), Positives = 53/133 (39%), Gaps = 26/133 (19%)
Query: 781 KFQPSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAE----------DPGRRPVLPQRP 830
K P K P P A ++ +Q P P+GPA + +PG++ +
Sbjct: 1101 KGAPGEKGPQGP----AGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKG 1156
Query: 831 PEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP 890
E PP PPG G + G P AG G PRG G G GA GF G PG
Sbjct: 1157 -ENGPPGPPGLQGPV------GAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPG-- 1207
Query: 891 KSPPVASPGAPVP 903
P+ G P P
Sbjct: 1208 ---PIGLQGLPGP 1217
Score = 49.7 bits (117), Expect = 1e-05
Identities = 42/113 (37%), Positives = 49/113 (43%), Gaps = 13/113 (11%)
Query: 784 PSAKA--PSPP----PPAEAPKEPLQPEPAPPRPSGPATAEDPGRR--PVLPQRPPEERP 835
PS +A P PP PP A E Q E G A AE P + PV PQ P +
Sbjct: 1361 PSGEAGPPGPPGKRGPPGAAGAEGRQGEKGA---KGEAGAEGPPGKTGPVGPQGPAGK-- 1415
Query: 836 PQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPG 888
P P G G+ G+ G P AG G P G G G PG++G G PG
Sbjct: 1416 PGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPG 1468
Score = 48.5 bits (114), Expect = 3e-05
Identities = 38/112 (33%), Positives = 43/112 (38%), Gaps = 7/112 (6%)
Query: 796 EAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERP------PQPPGSTGVIAETG 849
E PK P P PSG A + P LP P + P P PG+ G G
Sbjct: 825 EGPKGRAGPT-GDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARG 883
Query: 850 QAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP 901
AG P G G PRG G G PG +G +G G P P P P
Sbjct: 884 VAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGP 935
Score = 47.4 bits (111), Expect = 7e-05
Identities = 40/132 (30%), Positives = 48/132 (36%), Gaps = 7/132 (5%)
Query: 791 PPPPAEAPKEPLQPEPAP---PRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAE 847
P PP + E P P +GP P P P +P PPG G +
Sbjct: 636 PGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGP 695
Query: 848 TGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPV-ASPGAPVPSLV 906
G+ GPP G G P+G+ G G PG +G G PG P PG P
Sbjct: 696 QGEPGPPGQQGNPG---PQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQ 752
Query: 907 SFSAGLTQKPFP 918
S G P P
Sbjct: 753 SGEKGALGPPGP 764
Score = 46.2 bits (108), Expect = 2e-04
Identities = 45/141 (31%), Positives = 55/141 (39%), Gaps = 23/141 (16%)
Query: 789 PSPPPPAEAPKEPLQPE--PAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIA 846
P PP P+ P P P P P GP PG+ LP P + G TG
Sbjct: 923 PPGPPGERGPQGPQGPVGFPGPKGPPGP-----PGKDG-LPGHPGQRGETGFQGKTGPPG 976
Query: 847 ETGQAGPPAGAGVSG----RGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPV 902
G GP G +G RG P G G G +PGA G GA G P ++ P
Sbjct: 977 PGGVVGPQGPTGETGPIGERGHP-GPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGP- 1034
Query: 903 PSLVSFSAGLTQKPFPSDGGV 923
AGL + FP + G+
Sbjct: 1035 -------AGL--RGFPGERGL 1046
Score = 43.9 bits (102), Expect = 8e-04
Identities = 40/138 (28%), Positives = 54/138 (39%), Gaps = 12/138 (8%)
Query: 785 SAKAPSPPPPAEAPKEP-LQPEPAPPRPSGP----ATAEDPGRRPVLPQR--PPEERPPQ 837
+A PP P P P L+ +P G PG + R P + P
Sbjct: 1436 AAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPG 1495
Query: 838 PPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVAS 897
G G+ G GPP G+ G P+G G GS G +G +G PG P SP
Sbjct: 1496 AKGDGGIPGPAGPLGPPGPPGLPG---PQGPKGNKGSTGPAGQKGDSGLPGPPGSP--GP 1550
Query: 898 PGAPVPSLVSFSAGLTQK 915
PG + L S+ T++
Sbjct: 1551 PGEVIQPLPILSSKKTRR 1568
Score = 43.5 bits (101), Expect = 0.001
Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 835 PPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP 890
P PGS+G E+G GP GV G P G G+ G PGA+G G PG P
Sbjct: 554 PVGGPGSSGAKGESGDPGPQGPRGVQG---PPGPTGKPGKRGRPGADGGRGMPGEP 606
Score = 43.5 bits (101), Expect = 0.001
Identities = 31/94 (32%), Positives = 33/94 (35%), Gaps = 3/94 (3%)
Query: 808 PPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRG 867
P P G A P +P + PP PPG G G G P G G P G
Sbjct: 896 PTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPG---PPG 952
Query: 868 VDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP 901
DG G G GF G G P V P P
Sbjct: 953 KDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGP 986
Score = 43.1 bits (100), Expect = 0.001
Identities = 35/110 (31%), Positives = 41/110 (37%), Gaps = 9/110 (8%)
Query: 794 PAEAPKEPLQPEPA----PPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETG 849
P P P QP A PP P G + P P + P P G G E G
Sbjct: 668 PRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKG 727
Query: 850 QAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPG 899
G P AG+ G P G G+ G G +G G PG P+ PG
Sbjct: 728 PQGKPGLAGLPGADGPPGHPGKEGQS---GEKGALGPPG--PQGPIGYPG 772
Score = 42.0 bits (97), Expect = 0.003
Identities = 46/139 (33%), Positives = 55/139 (39%), Gaps = 29/139 (20%)
Query: 789 PSPP-PPAE------APKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGS 841
P PP PP E A KE + +P P SG + P L P E P G+
Sbjct: 999 PGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGK---DGPAG---LRGFPGERGLPGAQGA 1052
Query: 842 TGVIAETGQAGPPAGAGVSG-RGL-----PRGVDGQTGSGTVPGAEGFAGAPGY--PKSP 893
G+ G GPP G G RG P G+ G+ G PG G GAPG P+ P
Sbjct: 1053 PGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGP 1112
Query: 894 --------PVASPGAPVPS 904
PV PG P+
Sbjct: 1113 AGRDGVQGPVGLPGPAGPA 1131
Score = 41.6 bits (96), Expect = 0.004
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 10/115 (8%)
Query: 778 DLVKFQPSAKAPSPPPPAE-APKEPLQPEPAPPRPSGPATAEDPGRR---PVLPQRPPEE 833
D +++ P+ PP E P P + + +G + G++ V+ E
Sbjct: 394 DFYEYKEYEDKPTSPPNEEFGPGVPAETDITETSINGHGAYGEKGQKGEPAVVEPGMLVE 453
Query: 834 RPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPG 888
PP P G G++ G GP G G RG G+ G +PGA+G G PG
Sbjct: 454 GPPGPAGPAGIMGPPGLQGPTGPPGDPG---DRGPPGRPG---LPGADGLPGPPG 502
Score = 40.8 bits (94), Expect = 0.007
Identities = 30/98 (30%), Positives = 35/98 (35%), Gaps = 4/98 (4%)
Query: 808 PPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRG 867
PP P G P P E P P G GV G G P G G RG
Sbjct: 542 PPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRG 601
Query: 868 VDGQTGSGTVPGAEGFAGAPG----YPKSPPVASPGAP 901
+ G+ G+ G +G G PG + P PG P
Sbjct: 602 MPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPP 639
Score = 40.4 bits (93), Expect = 0.009
Identities = 41/148 (27%), Positives = 51/148 (34%), Gaps = 22/148 (14%)
Query: 793 PPAEAPKEPLQPEPA---PPRPSGPATAEDP-------GRRPVLPQRPPEERPPQP---- 838
PP KE E PP P GP P G R + + + P
Sbjct: 743 PPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKG 802
Query: 839 ----PGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP-KSP 893
G G + + G G G GR P G G +G G G G PGYP +
Sbjct: 803 DMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQG 862
Query: 894 PVAS---PGAPVPSLVSFSAGLTQKPFP 918
P S PG P + + G+ KP P
Sbjct: 863 PKGSTGFPGFPGANGEKGARGVAGKPGP 890
Score = 38.5 bits (88), Expect = 0.034
Identities = 44/149 (29%), Positives = 57/149 (38%), Gaps = 38/149 (25%)
Query: 783 QPSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRR--PVLPQRPPEERPPQPPG 840
+P PP PA P + P P P+GP DPG R P P P + P PPG
Sbjct: 447 EPGMLVEGPPGPA-GPAGIMGP-PGLQGPTGPPG--DPGDRGPPGRPGLPGADGLPGPPG 502
Query: 841 STGVI---------------AETGQA------------GPPAGAGVSGRGLPRGVDGQTG 873
+ ++ A+ QA GPP G++GR P G G +G
Sbjct: 503 TMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSG 562
Query: 874 S---GTVPGAEGFAGAPGYPKSPPVASPG 899
+ PG +G G G P P PG
Sbjct: 563 AKGESGDPGPQGPRGVQGPP--GPTGKPG 589
>gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo
sapiens]
Length = 1767
Score = 63.5 bits (153), Expect = 1e-09
Identities = 36/100 (36%), Positives = 44/100 (44%)
Query: 791 PPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQ 850
P PP + Q P P P GP + P +P L P + PP PG G E G
Sbjct: 648 PGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGA 707
Query: 851 AGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP 890
GPP G G PRGV G G + G++G G G+P
Sbjct: 708 LGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFP 747
Score = 60.5 bits (145), Expect = 8e-09
Identities = 49/138 (35%), Positives = 56/138 (40%), Gaps = 32/138 (23%)
Query: 789 PSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQ----------P 838
P PP P LQ P PP G E+ P+ P PP R PQ P
Sbjct: 1152 PGPPGPIG-----LQGLPGPPGEKG----ENGDVGPMGPPGPPGPRGPQGPNGADGPQGP 1202
Query: 839 PGSTGVIA------ETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP-- 890
PGS G + E G+AG P G +G G P+G G+ G PGA G GA G P
Sbjct: 1203 PGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGD 1262
Query: 891 -----KSPPVASPGAPVP 903
PV PG P P
Sbjct: 1263 DGPKGNPGPVGFPGDPGP 1280
Score = 60.1 bits (144), Expect = 1e-08
Identities = 47/151 (31%), Positives = 64/151 (42%), Gaps = 17/151 (11%)
Query: 784 PSAKAPSPPP--------PAEAPKEPLQPEPAPPRPSGPATAEDP-GRRPVLPQRPPEER 834
P K P PP P + + Q + PP P G + P G + +R
Sbjct: 891 PGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERG-HPG 949
Query: 835 PPQPPGSTGV---IAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPG--Y 889
PP PPG G+ + G G P G+SG+ P G+ G G +PGA+G G G
Sbjct: 950 PPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEG 1009
Query: 890 PKSP--PVASPGAPVPSLVSFSAGLTQKPFP 918
P+ P PV SPG + + GL +P P
Sbjct: 1010 PQGPPGPVGSPGERGSAGTAGPIGLPGRPGP 1040
Score = 59.3 bits (142), Expect = 2e-08
Identities = 42/126 (33%), Positives = 50/126 (39%), Gaps = 9/126 (7%)
Query: 784 PSAKAPSPPPPAEAPKEPLQP-----EPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQP 838
P AK P P + PK P +P PP GPA + G P + PP P
Sbjct: 1254 PGAKGP---PGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGP 1310
Query: 839 PGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP-PVAS 897
G G G+ GPP AG GR +G G+ G+ PG G G G P P
Sbjct: 1311 SGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGL 1370
Query: 898 PGAPVP 903
G P P
Sbjct: 1371 RGIPGP 1376
Score = 58.9 bits (141), Expect = 2e-08
Identities = 53/155 (34%), Positives = 58/155 (37%), Gaps = 37/155 (23%)
Query: 791 PPPPAEAPKE----PLQPE--PAPPRPSGPATAEDPGRRPVL---------PQRPPEERP 835
P PP E + P+ P P P P GP A+ P P P E
Sbjct: 1164 PGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGN 1223
Query: 836 PQPPGSTGV------IAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGY 889
P PPG GV E G+AGPP AG G P G DG G+ PG GF G PG
Sbjct: 1224 PGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGN---PGPVGFPGDPGP 1280
Query: 890 PKSPPVA-------------SPGAPVPSLVSFSAG 911
P P A PG P P S AG
Sbjct: 1281 PGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAG 1315
Score = 58.5 bits (140), Expect = 3e-08
Identities = 42/119 (35%), Positives = 53/119 (44%), Gaps = 17/119 (14%)
Query: 787 KAPSPPPPAEA----PKEPL--QPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPG 840
+A +P PP EA PK + E PP +GP A+ P P ++ P PG
Sbjct: 1220 EAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGP---------PGDDGPKGNPG 1270
Query: 841 STGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP--KSPPVAS 897
G + G G P AG G G +G DG G PG G AG PG P + PP A+
Sbjct: 1271 PVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAA 1329
Score = 52.0 bits (123), Expect = 3e-06
Identities = 44/145 (30%), Positives = 53/145 (36%), Gaps = 17/145 (11%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTG 843
P A+ E P+ P P +P TA G LP RP + PP P G G
Sbjct: 996 PGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIG----LPGRPGPQGPPGPAGEKG 1051
Query: 844 VIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP----------KSP 893
E G GP GV G P G+ G G PG +G G G P ++
Sbjct: 1052 APGEKGPQGPAGRDGVQG---PVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENG 1108
Query: 894 PVASPGAPVPSLVSFSAGLTQKPFP 918
P PG P AG +P P
Sbjct: 1109 PPGPPGLQGPVGAPGIAGGDGEPGP 1133
Score = 51.6 bits (122), Expect = 4e-06
Identities = 43/126 (34%), Positives = 52/126 (41%), Gaps = 19/126 (15%)
Query: 791 PPPPAEAPKEPLQPEPAPPR--PSGPATAEDPG--RRPVLP-------QRPPEERPPQPP 839
PP P P + +P R P P D G P LP +R P+ PP PP
Sbjct: 530 PPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQG-PPGPP 588
Query: 840 GSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP----KSPPV 895
G G+ E G+ GP G+ G PRG+ G G+ PG G AG G P P
Sbjct: 589 GDDGMRGEDGEIGP---RGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQ 645
Query: 896 ASPGAP 901
PG P
Sbjct: 646 GEPGPP 651
Score = 49.7 bits (117), Expect = 1e-05
Identities = 42/133 (31%), Positives = 53/133 (39%), Gaps = 26/133 (19%)
Query: 781 KFQPSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAE----------DPGRRPVLPQRP 830
K P K P P A ++ +Q P P+GPA + +PG++ +
Sbjct: 1050 KGAPGEKGPQGP----AGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKG 1105
Query: 831 PEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP 890
E PP PPG G + G P AG G PRG G G GA GF G PG
Sbjct: 1106 -ENGPPGPPGLQGPV------GAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPG-- 1156
Query: 891 KSPPVASPGAPVP 903
P+ G P P
Sbjct: 1157 ---PIGLQGLPGP 1166
Score = 49.7 bits (117), Expect = 1e-05
Identities = 42/113 (37%), Positives = 49/113 (43%), Gaps = 13/113 (11%)
Query: 784 PSAKA--PSPP----PPAEAPKEPLQPEPAPPRPSGPATAEDPGRR--PVLPQRPPEERP 835
PS +A P PP PP A E Q E G A AE P + PV PQ P +
Sbjct: 1310 PSGEAGPPGPPGKRGPPGAAGAEGRQGEKGA---KGEAGAEGPPGKTGPVGPQGPAGK-- 1364
Query: 836 PQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPG 888
P P G G+ G+ G P AG G P G G G PG++G G PG
Sbjct: 1365 PGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPG 1417
Score = 48.5 bits (114), Expect = 3e-05
Identities = 38/112 (33%), Positives = 43/112 (38%), Gaps = 7/112 (6%)
Query: 796 EAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERP------PQPPGSTGVIAETG 849
E PK P P PSG A + P LP P + P P PG+ G G
Sbjct: 774 EGPKGRAGPT-GDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARG 832
Query: 850 QAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP 901
AG P G G PRG G G PG +G +G G P P P P
Sbjct: 833 VAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGP 884
Score = 47.4 bits (111), Expect = 7e-05
Identities = 40/132 (30%), Positives = 48/132 (36%), Gaps = 7/132 (5%)
Query: 791 PPPPAEAPKEPLQPEPAP---PRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAE 847
P PP + E P P +GP P P P +P PPG G +
Sbjct: 585 PGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGP 644
Query: 848 TGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPV-ASPGAPVPSLV 906
G+ GPP G G P+G+ G G PG +G G PG P PG P
Sbjct: 645 QGEPGPPGQQGNPG---PQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQ 701
Query: 907 SFSAGLTQKPFP 918
S G P P
Sbjct: 702 SGEKGALGPPGP 713
Score = 46.2 bits (108), Expect = 2e-04
Identities = 45/141 (31%), Positives = 55/141 (39%), Gaps = 23/141 (16%)
Query: 789 PSPPPPAEAPKEPLQPE--PAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIA 846
P PP P+ P P P P P GP PG+ LP P + G TG
Sbjct: 872 PPGPPGERGPQGPQGPVGFPGPKGPPGP-----PGKDG-LPGHPGQRGETGFQGKTGPPG 925
Query: 847 ETGQAGPPAGAGVSG----RGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPV 902
G GP G +G RG P G G G +PGA G GA G P ++ P
Sbjct: 926 PGGVVGPQGPTGETGPIGERGHP-GPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGP- 983
Query: 903 PSLVSFSAGLTQKPFPSDGGV 923
AGL + FP + G+
Sbjct: 984 -------AGL--RGFPGERGL 995
Score = 43.9 bits (102), Expect = 8e-04
Identities = 40/138 (28%), Positives = 54/138 (39%), Gaps = 12/138 (8%)
Query: 785 SAKAPSPPPPAEAPKEP-LQPEPAPPRPSGP----ATAEDPGRRPVLPQR--PPEERPPQ 837
+A PP P P P L+ +P G PG + R P + P
Sbjct: 1385 AAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPG 1444
Query: 838 PPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVAS 897
G G+ G GPP G+ G P+G G GS G +G +G PG P SP
Sbjct: 1445 AKGDGGIPGPAGPLGPPGPPGLPG---PQGPKGNKGSTGPAGQKGDSGLPGPPGSP--GP 1499
Query: 898 PGAPVPSLVSFSAGLTQK 915
PG + L S+ T++
Sbjct: 1500 PGEVIQPLPILSSKKTRR 1517
Score = 43.5 bits (101), Expect = 0.001
Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 835 PPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP 890
P PGS+G E+G GP GV G P G G+ G PGA+G G PG P
Sbjct: 503 PVGGPGSSGAKGESGDPGPQGPRGVQG---PPGPTGKPGKRGRPGADGGRGMPGEP 555
Score = 43.5 bits (101), Expect = 0.001
Identities = 31/94 (32%), Positives = 33/94 (35%), Gaps = 3/94 (3%)
Query: 808 PPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRG 867
P P G A P +P + PP PPG G G G P G G P G
Sbjct: 845 PTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPG---PPG 901
Query: 868 VDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP 901
DG G G GF G G P V P P
Sbjct: 902 KDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGP 935
Score = 43.1 bits (100), Expect = 0.001
Identities = 35/110 (31%), Positives = 41/110 (37%), Gaps = 9/110 (8%)
Query: 794 PAEAPKEPLQPEPA----PPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETG 849
P P P QP A PP P G + P P + P P G G E G
Sbjct: 617 PRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKG 676
Query: 850 QAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPG 899
G P AG+ G P G G+ G G +G G PG P+ PG
Sbjct: 677 PQGKPGLAGLPGADGPPGHPGKEGQS---GEKGALGPPG--PQGPIGYPG 721
Score = 42.0 bits (97), Expect = 0.003
Identities = 46/139 (33%), Positives = 55/139 (39%), Gaps = 29/139 (20%)
Query: 789 PSPP-PPAE------APKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGS 841
P PP PP E A KE + +P P SG + P L P E P G+
Sbjct: 948 PGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGK---DGPAG---LRGFPGERGLPGAQGA 1001
Query: 842 TGVIAETGQAGPPAGAGVSG-RGL-----PRGVDGQTGSGTVPGAEGFAGAPGY--PKSP 893
G+ G GPP G G RG P G+ G+ G PG G GAPG P+ P
Sbjct: 1002 PGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGP 1061
Query: 894 --------PVASPGAPVPS 904
PV PG P+
Sbjct: 1062 AGRDGVQGPVGLPGPAGPA 1080
Score = 41.6 bits (96), Expect = 0.004
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 10/115 (8%)
Query: 778 DLVKFQPSAKAPSPPPPAE-APKEPLQPEPAPPRPSGPATAEDPGRR---PVLPQRPPEE 833
D +++ P+ PP E P P + + +G + G++ V+ E
Sbjct: 343 DFYEYKEYEDKPTSPPNEEFGPGVPAETDITETSINGHGAYGEKGQKGEPAVVEPGMLVE 402
Query: 834 RPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPG 888
PP P G G++ G GP G G RG G+ G +PGA+G G PG
Sbjct: 403 GPPGPAGPAGIMGPPGLQGPTGPPGDPG---DRGPPGRPG---LPGADGLPGPPG 451
Score = 40.8 bits (94), Expect = 0.007
Identities = 30/98 (30%), Positives = 35/98 (35%), Gaps = 4/98 (4%)
Query: 808 PPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRG 867
PP P G P P E P P G GV G G P G G RG
Sbjct: 491 PPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRG 550
Query: 868 VDGQTGSGTVPGAEGFAGAPG----YPKSPPVASPGAP 901
+ G+ G+ G +G G PG + P PG P
Sbjct: 551 MPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPP 588
Score = 40.4 bits (93), Expect = 0.009
Identities = 41/148 (27%), Positives = 51/148 (34%), Gaps = 22/148 (14%)
Query: 793 PPAEAPKEPLQPEPA---PPRPSGPATAEDP-------GRRPVLPQRPPEERPPQP---- 838
PP KE E PP P GP P G R + + + P
Sbjct: 692 PPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKG 751
Query: 839 ----PGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP-KSP 893
G G + + G G G GR P G G +G G G G PGYP +
Sbjct: 752 DMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQG 811
Query: 894 PVAS---PGAPVPSLVSFSAGLTQKPFP 918
P S PG P + + G+ KP P
Sbjct: 812 PKGSTGFPGFPGANGEKGARGVAGKPGP 839
Score = 38.5 bits (88), Expect = 0.034
Identities = 44/149 (29%), Positives = 57/149 (38%), Gaps = 38/149 (25%)
Query: 783 QPSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRR--PVLPQRPPEERPPQPPG 840
+P PP PA P + P P P+GP DPG R P P P + P PPG
Sbjct: 396 EPGMLVEGPPGPA-GPAGIMGP-PGLQGPTGPPG--DPGDRGPPGRPGLPGADGLPGPPG 451
Query: 841 STGVI---------------AETGQA------------GPPAGAGVSGRGLPRGVDGQTG 873
+ ++ A+ QA GPP G++GR P G G +G
Sbjct: 452 TMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSG 511
Query: 874 S---GTVPGAEGFAGAPGYPKSPPVASPG 899
+ PG +G G G P P PG
Sbjct: 512 AKGESGDPGPQGPRGVQGPP--GPTGKPG 538
>gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo
sapiens]
Length = 1806
Score = 63.5 bits (153), Expect = 1e-09
Identities = 36/100 (36%), Positives = 44/100 (44%)
Query: 791 PPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQ 850
P PP + Q P P P GP + P +P L P + PP PG G E G
Sbjct: 687 PGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGA 746
Query: 851 AGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP 890
GPP G G PRGV G G + G++G G G+P
Sbjct: 747 LGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFP 786
Score = 60.5 bits (145), Expect = 8e-09
Identities = 49/138 (35%), Positives = 56/138 (40%), Gaps = 32/138 (23%)
Query: 789 PSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQ----------P 838
P PP P LQ P PP G E+ P+ P PP R PQ P
Sbjct: 1191 PGPPGPIG-----LQGLPGPPGEKG----ENGDVGPMGPPGPPGPRGPQGPNGADGPQGP 1241
Query: 839 PGSTGVIA------ETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP-- 890
PGS G + E G+AG P G +G G P+G G+ G PGA G GA G P
Sbjct: 1242 PGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGD 1301
Query: 891 -----KSPPVASPGAPVP 903
PV PG P P
Sbjct: 1302 DGPKGNPGPVGFPGDPGP 1319
Score = 60.1 bits (144), Expect = 1e-08
Identities = 47/151 (31%), Positives = 64/151 (42%), Gaps = 17/151 (11%)
Query: 784 PSAKAPSPPP--------PAEAPKEPLQPEPAPPRPSGPATAEDP-GRRPVLPQRPPEER 834
P K P PP P + + Q + PP P G + P G + +R
Sbjct: 930 PGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERG-HPG 988
Query: 835 PPQPPGSTGV---IAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPG--Y 889
PP PPG G+ + G G P G+SG+ P G+ G G +PGA+G G G
Sbjct: 989 PPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEG 1048
Query: 890 PKSP--PVASPGAPVPSLVSFSAGLTQKPFP 918
P+ P PV SPG + + GL +P P
Sbjct: 1049 PQGPPGPVGSPGERGSAGTAGPIGLPGRPGP 1079
Score = 59.3 bits (142), Expect = 2e-08
Identities = 42/126 (33%), Positives = 50/126 (39%), Gaps = 9/126 (7%)
Query: 784 PSAKAPSPPPPAEAPKEPLQP-----EPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQP 838
P AK P P + PK P +P PP GPA + G P + PP P
Sbjct: 1293 PGAKGP---PGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGP 1349
Query: 839 PGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP-PVAS 897
G G G+ GPP AG GR +G G+ G+ PG G G G P P
Sbjct: 1350 SGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGL 1409
Query: 898 PGAPVP 903
G P P
Sbjct: 1410 RGIPGP 1415
Score = 58.9 bits (141), Expect = 2e-08
Identities = 53/155 (34%), Positives = 58/155 (37%), Gaps = 37/155 (23%)
Query: 791 PPPPAEAPKE----PLQPE--PAPPRPSGPATAEDPGRRPVL---------PQRPPEERP 835
P PP E + P+ P P P P GP A+ P P P E
Sbjct: 1203 PGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGN 1262
Query: 836 PQPPGSTGV------IAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGY 889
P PPG GV E G+AGPP AG G P G DG G+ PG GF G PG
Sbjct: 1263 PGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGN---PGPVGFPGDPGP 1319
Query: 890 PKSPPVA-------------SPGAPVPSLVSFSAG 911
P P A PG P P S AG
Sbjct: 1320 PGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAG 1354
Score = 58.5 bits (140), Expect = 3e-08
Identities = 42/119 (35%), Positives = 53/119 (44%), Gaps = 17/119 (14%)
Query: 787 KAPSPPPPAEA----PKEPL--QPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPG 840
+A +P PP EA PK + E PP +GP A+ P P ++ P PG
Sbjct: 1259 EAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGP---------PGDDGPKGNPG 1309
Query: 841 STGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP--KSPPVAS 897
G + G G P AG G G +G DG G PG G AG PG P + PP A+
Sbjct: 1310 PVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAA 1368
Score = 52.0 bits (123), Expect = 3e-06
Identities = 44/145 (30%), Positives = 53/145 (36%), Gaps = 17/145 (11%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTG 843
P A+ E P+ P P +P TA G LP RP + PP P G G
Sbjct: 1035 PGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIG----LPGRPGPQGPPGPAGEKG 1090
Query: 844 VIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP----------KSP 893
E G GP GV G P G+ G G PG +G G G P ++
Sbjct: 1091 APGEKGPQGPAGRDGVQG---PVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENG 1147
Query: 894 PVASPGAPVPSLVSFSAGLTQKPFP 918
P PG P AG +P P
Sbjct: 1148 PPGPPGLQGPVGAPGIAGGDGEPGP 1172
Score = 51.6 bits (122), Expect = 4e-06
Identities = 43/126 (34%), Positives = 52/126 (41%), Gaps = 19/126 (15%)
Query: 791 PPPPAEAPKEPLQPEPAPPR--PSGPATAEDPG--RRPVLP-------QRPPEERPPQPP 839
PP P P + +P R P P D G P LP +R P+ PP PP
Sbjct: 569 PPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQG-PPGPP 627
Query: 840 GSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP----KSPPV 895
G G+ E G+ GP G+ G PRG+ G G+ PG G AG G P P
Sbjct: 628 GDDGMRGEDGEIGP---RGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQ 684
Query: 896 ASPGAP 901
PG P
Sbjct: 685 GEPGPP 690
Score = 49.7 bits (117), Expect = 1e-05
Identities = 42/133 (31%), Positives = 53/133 (39%), Gaps = 26/133 (19%)
Query: 781 KFQPSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAE----------DPGRRPVLPQRP 830
K P K P P A ++ +Q P P+GPA + +PG++ +
Sbjct: 1089 KGAPGEKGPQGP----AGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKG 1144
Query: 831 PEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP 890
E PP PPG G + G P AG G PRG G G GA GF G PG
Sbjct: 1145 -ENGPPGPPGLQGPV------GAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPG-- 1195
Query: 891 KSPPVASPGAPVP 903
P+ G P P
Sbjct: 1196 ---PIGLQGLPGP 1205
Score = 49.7 bits (117), Expect = 1e-05
Identities = 42/113 (37%), Positives = 49/113 (43%), Gaps = 13/113 (11%)
Query: 784 PSAKA--PSPP----PPAEAPKEPLQPEPAPPRPSGPATAEDPGRR--PVLPQRPPEERP 835
PS +A P PP PP A E Q E G A AE P + PV PQ P +
Sbjct: 1349 PSGEAGPPGPPGKRGPPGAAGAEGRQGEKGA---KGEAGAEGPPGKTGPVGPQGPAGK-- 1403
Query: 836 PQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPG 888
P P G G+ G+ G P AG G P G G G PG++G G PG
Sbjct: 1404 PGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPG 1456
Score = 48.5 bits (114), Expect = 3e-05
Identities = 38/112 (33%), Positives = 43/112 (38%), Gaps = 7/112 (6%)
Query: 796 EAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERP------PQPPGSTGVIAETG 849
E PK P P PSG A + P LP P + P P PG+ G G
Sbjct: 813 EGPKGRAGPT-GDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARG 871
Query: 850 QAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP 901
AG P G G PRG G G PG +G +G G P P P P
Sbjct: 872 VAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGP 923
Score = 47.4 bits (111), Expect = 7e-05
Identities = 40/132 (30%), Positives = 48/132 (36%), Gaps = 7/132 (5%)
Query: 791 PPPPAEAPKEPLQPEPAP---PRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAE 847
P PP + E P P +GP P P P +P PPG G +
Sbjct: 624 PGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGP 683
Query: 848 TGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPV-ASPGAPVPSLV 906
G+ GPP G G P+G+ G G PG +G G PG P PG P
Sbjct: 684 QGEPGPPGQQGNPG---PQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQ 740
Query: 907 SFSAGLTQKPFP 918
S G P P
Sbjct: 741 SGEKGALGPPGP 752
Score = 46.2 bits (108), Expect = 2e-04
Identities = 45/141 (31%), Positives = 55/141 (39%), Gaps = 23/141 (16%)
Query: 789 PSPPPPAEAPKEPLQPE--PAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIA 846
P PP P+ P P P P P GP PG+ LP P + G TG
Sbjct: 911 PPGPPGERGPQGPQGPVGFPGPKGPPGP-----PGKDG-LPGHPGQRGETGFQGKTGPPG 964
Query: 847 ETGQAGPPAGAGVSG----RGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPV 902
G GP G +G RG P G G G +PGA G GA G P ++ P
Sbjct: 965 PGGVVGPQGPTGETGPIGERGHP-GPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGP- 1022
Query: 903 PSLVSFSAGLTQKPFPSDGGV 923
AGL + FP + G+
Sbjct: 1023 -------AGL--RGFPGERGL 1034
Score = 43.9 bits (102), Expect = 8e-04
Identities = 40/138 (28%), Positives = 54/138 (39%), Gaps = 12/138 (8%)
Query: 785 SAKAPSPPPPAEAPKEP-LQPEPAPPRPSGP----ATAEDPGRRPVLPQR--PPEERPPQ 837
+A PP P P P L+ +P G PG + R P + P
Sbjct: 1424 AAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPG 1483
Query: 838 PPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVAS 897
G G+ G GPP G+ G P+G G GS G +G +G PG P SP
Sbjct: 1484 AKGDGGIPGPAGPLGPPGPPGLPG---PQGPKGNKGSTGPAGQKGDSGLPGPPGSP--GP 1538
Query: 898 PGAPVPSLVSFSAGLTQK 915
PG + L S+ T++
Sbjct: 1539 PGEVIQPLPILSSKKTRR 1556
Score = 43.5 bits (101), Expect = 0.001
Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 835 PPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP 890
P PGS+G E+G GP GV G P G G+ G PGA+G G PG P
Sbjct: 542 PVGGPGSSGAKGESGDPGPQGPRGVQG---PPGPTGKPGKRGRPGADGGRGMPGEP 594
Score = 43.5 bits (101), Expect = 0.001
Identities = 31/94 (32%), Positives = 33/94 (35%), Gaps = 3/94 (3%)
Query: 808 PPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRG 867
P P G A P +P + PP PPG G G G P G G P G
Sbjct: 884 PTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPG---PPG 940
Query: 868 VDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP 901
DG G G GF G G P V P P
Sbjct: 941 KDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGP 974
Score = 43.1 bits (100), Expect = 0.001
Identities = 35/110 (31%), Positives = 41/110 (37%), Gaps = 9/110 (8%)
Query: 794 PAEAPKEPLQPEPA----PPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETG 849
P P P QP A PP P G + P P + P P G G E G
Sbjct: 656 PRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKG 715
Query: 850 QAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPG 899
G P AG+ G P G G+ G G +G G PG P+ PG
Sbjct: 716 PQGKPGLAGLPGADGPPGHPGKEGQS---GEKGALGPPG--PQGPIGYPG 760
Score = 42.0 bits (97), Expect = 0.003
Identities = 46/139 (33%), Positives = 55/139 (39%), Gaps = 29/139 (20%)
Query: 789 PSPP-PPAE------APKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGS 841
P PP PP E A KE + +P P SG + P L P E P G+
Sbjct: 987 PGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGK---DGPAG---LRGFPGERGLPGAQGA 1040
Query: 842 TGVIAETGQAGPPAGAGVSG-RGL-----PRGVDGQTGSGTVPGAEGFAGAPGY--PKSP 893
G+ G GPP G G RG P G+ G+ G PG G GAPG P+ P
Sbjct: 1041 PGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGP 1100
Query: 894 --------PVASPGAPVPS 904
PV PG P+
Sbjct: 1101 AGRDGVQGPVGLPGPAGPA 1119
Score = 41.6 bits (96), Expect = 0.004
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 10/115 (8%)
Query: 778 DLVKFQPSAKAPSPPPPAE-APKEPLQPEPAPPRPSGPATAEDPGRR---PVLPQRPPEE 833
D +++ P+ PP E P P + + +G + G++ V+ E
Sbjct: 382 DFYEYKEYEDKPTSPPNEEFGPGVPAETDITETSINGHGAYGEKGQKGEPAVVEPGMLVE 441
Query: 834 RPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPG 888
PP P G G++ G GP G G RG G+ G +PGA+G G PG
Sbjct: 442 GPPGPAGPAGIMGPPGLQGPTGPPGDPG---DRGPPGRPG---LPGADGLPGPPG 490
Score = 40.8 bits (94), Expect = 0.007
Identities = 30/98 (30%), Positives = 35/98 (35%), Gaps = 4/98 (4%)
Query: 808 PPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRG 867
PP P G P P E P P G GV G G P G G RG
Sbjct: 530 PPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRG 589
Query: 868 VDGQTGSGTVPGAEGFAGAPG----YPKSPPVASPGAP 901
+ G+ G+ G +G G PG + P PG P
Sbjct: 590 MPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPP 627
Score = 40.4 bits (93), Expect = 0.009
Identities = 41/148 (27%), Positives = 51/148 (34%), Gaps = 22/148 (14%)
Query: 793 PPAEAPKEPLQPEPA---PPRPSGPATAEDP-------GRRPVLPQRPPEERPPQP---- 838
PP KE E PP P GP P G R + + + P
Sbjct: 731 PPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKG 790
Query: 839 ----PGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP-KSP 893
G G + + G G G GR P G G +G G G G PGYP +
Sbjct: 791 DMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQG 850
Query: 894 PVAS---PGAPVPSLVSFSAGLTQKPFP 918
P S PG P + + G+ KP P
Sbjct: 851 PKGSTGFPGFPGANGEKGARGVAGKPGP 878
Score = 38.5 bits (88), Expect = 0.034
Identities = 44/149 (29%), Positives = 57/149 (38%), Gaps = 38/149 (25%)
Query: 783 QPSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRR--PVLPQRPPEERPPQPPG 840
+P PP PA P + P P P+GP DPG R P P P + P PPG
Sbjct: 435 EPGMLVEGPPGPA-GPAGIMGP-PGLQGPTGPPG--DPGDRGPPGRPGLPGADGLPGPPG 490
Query: 841 STGVI---------------AETGQA------------GPPAGAGVSGRGLPRGVDGQTG 873
+ ++ A+ QA GPP G++GR P G G +G
Sbjct: 491 TMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSG 550
Query: 874 S---GTVPGAEGFAGAPGYPKSPPVASPG 899
+ PG +G G G P P PG
Sbjct: 551 AKGESGDPGPQGPRGVQGPP--GPTGKPG 577
>gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo
sapiens]
Length = 1688
Score = 63.5 bits (153), Expect = 1e-09
Identities = 46/126 (36%), Positives = 54/126 (42%), Gaps = 8/126 (6%)
Query: 791 PPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQ 850
PP P +P L+ P P GP PGR P P E PP PG+ G+ E G
Sbjct: 1236 PPGPPGSPGPALEGPKGNPGPQGP-----PGR-PGFQGLPGPEGPPGLPGNGGIKGEKGN 1289
Query: 851 AGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVPSLVSFSA 910
G P G+ G +G G G+ PG G G PG P P PG PS V SA
Sbjct: 1290 PGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVP--GFPGMKGPSGVPGSA 1347
Query: 911 GLTQKP 916
G +P
Sbjct: 1348 GPEGEP 1353
Score = 57.0 bits (136), Expect = 9e-08
Identities = 44/139 (31%), Positives = 50/139 (35%), Gaps = 24/139 (17%)
Query: 791 PPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPE----ERPPQP-------- 838
P P + L P P P GP P P LP P P QP
Sbjct: 1109 PGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGK 1168
Query: 839 PGSTGVIAETGQAGPPAGAGVSGRGLP--RGVDGQTGSGTVPGAEGFAGAPGYPKSP--- 893
PG G+ GQ G P G G P G+ GQ G G +PG G G PG P
Sbjct: 1169 PGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFH 1228
Query: 894 -------PVASPGAPVPSL 905
P PG+P P+L
Sbjct: 1229 GFPGVQGPPGPPGSPGPAL 1247
Score = 56.2 bits (134), Expect = 2e-07
Identities = 43/133 (32%), Positives = 52/133 (39%), Gaps = 23/133 (17%)
Query: 792 PPPAEAPKEPLQP---EPAPPRPSGPATAEDPGRRPVLPQRP----PE-----------E 833
P PA EP QP P PP G + + G P +P P P+ +
Sbjct: 1175 PGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQ 1234
Query: 834 RPPQPPGSTGVIAE-----TGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPG 888
PP PPGS G E G GPP G G P G G G+G + G +G G PG
Sbjct: 1235 GPPGPPGSPGPALEGPKGNPGPQGPPGRPGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPG 1294
Query: 889 YPKSPPVASPGAP 901
P P + P
Sbjct: 1295 LPGLPGLKGDQGP 1307
Score = 54.7 bits (130), Expect = 5e-07
Identities = 41/119 (34%), Positives = 49/119 (41%), Gaps = 12/119 (10%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTG 843
P P PP + L P P GP P P LP + PP PPG G
Sbjct: 773 PKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLP-GIGVQGPPGPPGIPG 831
Query: 844 VIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP-PVASPGAP 901
I + G G P G G P G+D VPG G G+PG P +P P+ PG+P
Sbjct: 832 PIGQPGLHGIPGEKGDPG---PPGLD-------VPGPPGERGSPGIPGAPGPIGPPGSP 880
Score = 52.8 bits (125), Expect = 2e-06
Identities = 43/143 (30%), Positives = 57/143 (39%), Gaps = 10/143 (6%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTG 843
P K PP + P P + +P P P PG P P + PG+ G
Sbjct: 842 PGEKGDPGPPGLDVPGPPGE-RGSPGIPGAPGPIGPPGS----PGLPGKAGASGFPGTKG 896
Query: 844 VIAETGQAGPPAGAGVSGR-GLP--RGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGA 900
+ G GPP G+ GR G+P +G DG G +PG G G+ G P P PG
Sbjct: 897 EMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLP--GPPGP 954
Query: 901 PVPSLVSFSAGLTQKPFPSDGGV 923
P+L+ + P GV
Sbjct: 955 MDPNLLGSKGEKGEPGLPGIPGV 977
Score = 52.4 bits (124), Expect = 2e-06
Identities = 38/130 (29%), Positives = 50/130 (38%), Gaps = 13/130 (10%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTG 843
P + P PP E ++ Q EP G + +P +P P + P PG G
Sbjct: 272 PGIRGPPGPPGGEKGEKGEQGEPGK---RGKPGKDGENGQPGIPGLPGDPGYPGEPGRDG 328
Query: 844 VIAETGQAGPPAGAGV----SGRGLPRGVDGQTGSGTVPGAE------GFAGAPGYPKSP 893
+ G GPP G+ G G+ G G G +PG + G G PG P P
Sbjct: 329 EKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGERGFPGIQGPPGLPGPP 388
Query: 894 PVASPGAPVP 903
A G P P
Sbjct: 389 GAAVMGPPGP 398
Score = 52.0 bits (123), Expect = 3e-06
Identities = 45/123 (36%), Positives = 48/123 (39%), Gaps = 16/123 (13%)
Query: 789 PSPPPPAEAPKEP----LQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGV 844
P P P AP P L+ P PP GP +PG LP P PP PG G
Sbjct: 718 PGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKG--EPGF--ALPGPPG---PPGLPGFKGA 770
Query: 845 IAETGQAGPPAGAGVSGR----GLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGA 900
+ G G P G GR GLP G G G PG G G PG P PG
Sbjct: 771 LGPKGDRGFPGPPGPPGRTGLDGLP-GPKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGI 829
Query: 901 PVP 903
P P
Sbjct: 830 PGP 832
Score = 52.0 bits (123), Expect = 3e-06
Identities = 44/128 (34%), Positives = 56/128 (43%), Gaps = 15/128 (11%)
Query: 784 PSAKAPSPPPPAEAPK-EP-LQPEPAPPRPSGPA--------TAEDPG--RRPVLPQRPP 831
P K PS P + P+ EP L P PP GP+ A PG +P L P
Sbjct: 1335 PGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPG 1394
Query: 832 EERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTV---PGAEGFAGAPG 888
+ P PG TG + G+ G P G GR G+ GQ G+ + PG +G G PG
Sbjct: 1395 PQGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPG 1454
Query: 889 YPKSPPVA 896
P + VA
Sbjct: 1455 PPGTSSVA 1462
Score = 51.6 bits (122), Expect = 4e-06
Identities = 47/158 (29%), Positives = 54/158 (34%), Gaps = 51/158 (32%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPE---------PAPP----RPSGPATAEDPGRRPVLPQRP 830
P A PP P P E Q P PP +P P PG P P P
Sbjct: 388 PGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPG--PAGPHIP 445
Query: 831 PEER-----PPQPPGS-------------------------TGVIAETGQAG------PP 854
P + PP PPGS TG+ GQ G PP
Sbjct: 446 PSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPP 505
Query: 855 AGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKS 892
G G+ +G G TG +PG G GAPG+P S
Sbjct: 506 GSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGS 543
Score = 51.6 bits (122), Expect = 4e-06
Identities = 46/137 (33%), Positives = 56/137 (40%), Gaps = 26/137 (18%)
Query: 789 PSPPPPAE-----APKEPLQPE-PAPPRPSGPATAE----DPGRRPVLPQRPPEERPPQP 838
P PP P + + E +P P P SGP + DPG+ P L +P PP P
Sbjct: 949 PGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQ-PGLSGQPGLPGPPGP 1007
Query: 839 PGSTGVIAETGQAGPPA------------GAGVSGRGLPRGVDGQTGSGTVPGAEGFAGA 886
G+ G+ + G GPP GV G P GV GQ GS PG G G
Sbjct: 1008 KGNPGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGS---PGLPGQKGD 1064
Query: 887 PGYPKSPPVASPGAPVP 903
G P + PG P P
Sbjct: 1065 KGDPGISSIGLPGLPGP 1081
Score = 51.2 bits (121), Expect = 5e-06
Identities = 47/149 (31%), Positives = 54/149 (36%), Gaps = 16/149 (10%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSG----PATAEDPGRRPVLPQRPPEERPPQP- 838
P P PP K P PP P G P PG P LP P + P P
Sbjct: 62 PGFPGPEGPPGPRGQKGD-DGIPGPPGPKGIRGPPGLPGFPGT-PGLPGMPGHDGAPGPQ 119
Query: 839 --PGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGS------GTVPGAEGFAGAPGYP 890
PG G E G G P G+ G P G+ G G ++PG +G G PG P
Sbjct: 120 GIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPP 179
Query: 891 KSPPVASP-GAPVPSLVSFSAGLTQKPFP 918
+ P G P P GL P P
Sbjct: 180 GIQGLPGPTGIPGPIGPPGPPGLMGPPGP 208
Score = 50.4 bits (119), Expect = 9e-06
Identities = 39/119 (32%), Positives = 50/119 (42%), Gaps = 12/119 (10%)
Query: 791 PPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPV-LPQRP-PEERPPQP--PGSTGVIA 846
PP P+ P +P +P P DPG + LP P P+ P P PG+ G+
Sbjct: 1043 PPGPSGVPGQP----GSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKG 1098
Query: 847 ETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP----PVASPGAP 901
G G P G G G+ G G+ PG +G +G PG P P PV G P
Sbjct: 1099 SVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHP 1157
Score = 50.4 bits (119), Expect = 9e-06
Identities = 34/97 (35%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
Query: 808 PPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETG---QAGPPAGAGVSGRGL 864
P P P T G+ P LP P PP P G +G G + GP G G G+
Sbjct: 1103 PGLPGLPGTPGAKGQ-PGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPG 1161
Query: 865 PRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP 901
P G G+ G +PG G G PG P PG P
Sbjct: 1162 PPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLP 1198
Score = 49.3 bits (116), Expect = 2e-05
Identities = 43/130 (33%), Positives = 47/130 (36%), Gaps = 4/130 (3%)
Query: 789 PSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGV--IA 846
P P P P + + P P P D G P P P + P PGS G I
Sbjct: 646 PGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGL-PGDPGLPGQPGLPGIPGSKGEPGIP 704
Query: 847 ETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP-VPSL 905
G GPP G G P G G G + G G G PG P A PG P P L
Sbjct: 705 GIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPGPPGPPGL 764
Query: 906 VSFSAGLTQK 915
F L K
Sbjct: 765 PGFKGALGPK 774
Score = 47.0 bits (110), Expect = 9e-05
Identities = 35/97 (36%), Positives = 39/97 (40%), Gaps = 22/97 (22%)
Query: 824 PVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSG-RGLP-----------RGVDGQ 871
P LP P E PP P G G + G GPP G+ G GLP G DG
Sbjct: 59 PGLPGFPGPEGPPGPRGQKG---DDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGA 115
Query: 872 TGSGTVPGAEGFAGAPGYPKSP-------PVASPGAP 901
G +PG G G G+P SP P PG P
Sbjct: 116 PGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIP 152
Score = 47.0 bits (110), Expect = 9e-05
Identities = 44/143 (30%), Positives = 50/143 (34%), Gaps = 24/143 (16%)
Query: 783 QPSAKA-PSPPPPAEAPKEPLQP--EPAPPRPSG-PATAEDPGRRPVLPQRPPE------ 832
QP A P PP PA P EP PP P G P G + V +
Sbjct: 427 QPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIG 486
Query: 833 ---ERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGY 889
PP PG G+ G G P G G+ G G G PGA GF G+ G
Sbjct: 487 TGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGE 546
Query: 890 P-----------KSPPVASPGAP 901
P + SPGAP
Sbjct: 547 PGDILTFPGMKGDKGELGSPGAP 569
Score = 46.6 bits (109), Expect = 1e-04
Identities = 36/112 (32%), Positives = 45/112 (40%), Gaps = 23/112 (20%)
Query: 793 PPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQ-------RPPEERPPQPPGSTGVI 845
P E ++ LQ P PP G + + +RP+ + P + PP PPG G
Sbjct: 225 PKGEKGEQGLQGPPGPP---GQISEQ---KRPIDVEFQKGDQGLPGDRGPPGPPGIRG-- 276
Query: 846 AETGQAGPPAGA----GVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP 893
GPP G G G RG G+ G PG G G PGYP P
Sbjct: 277 ----PPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEP 324
Score = 46.6 bits (109), Expect = 1e-04
Identities = 42/132 (31%), Positives = 46/132 (34%), Gaps = 23/132 (17%)
Query: 791 PPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQ 850
P P E + E PP P PG + P PP PP P G G+ G
Sbjct: 587 PGPKGEPGGITFKGERGPP--GNPGLPGLPGN--IGPMGPPGFGPPGPVGEKGIQGVAGN 642
Query: 851 AGPPAGAGVSGR-----------GLPR--GVDGQTGSGTVPGAEGFAGAPGYPKS----- 892
G P G G GLP G DG G PG G G PG P S
Sbjct: 643 PGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPG 702
Query: 893 -PPVASPGAPVP 903
P + PG P P
Sbjct: 703 IPGIGLPGPPGP 714
Score = 45.8 bits (107), Expect = 2e-04
Identities = 38/119 (31%), Positives = 44/119 (36%), Gaps = 14/119 (11%)
Query: 791 PPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRR--PVLPQRPPEERP------PQPPGST 842
P P E + P PP P P G + P LP P P P PG
Sbjct: 934 PGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQP 993
Query: 843 GVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP 901
G+ + G GPP G GLP GQ G PG +G G G+P V P P
Sbjct: 994 GLSGQPGLPGPPGPKG--NPGLP----GQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGP 1046
Score = 45.8 bits (107), Expect = 2e-04
Identities = 39/132 (29%), Positives = 49/132 (37%), Gaps = 14/132 (10%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPA-----PPRPSGPATAEDPGRRPVLPQRPPEERP--- 835
P K S PP P P +P P P +P P PG+ + + P
Sbjct: 1130 PGPKGISGPPGN--PGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQP 1187
Query: 836 ----PQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPK 891
P PPG G+ + G G P G G P+G G G V G G G+PG
Sbjct: 1188 GFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPAL 1247
Query: 892 SPPVASPGAPVP 903
P +PG P
Sbjct: 1248 EGPKGNPGPQGP 1259
Score = 43.5 bits (101), Expect = 0.001
Identities = 38/125 (30%), Positives = 47/125 (37%), Gaps = 14/125 (11%)
Query: 791 PPPPAEAPKEPLQPEPAPPRPSG-----PATAEDPGRR-----PVLPQRPPEERPPQPPG 840
P P ++ + + PP P G P T G + P LP E P G
Sbjct: 321 PGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGERGFPGIQG 380
Query: 841 STGVIAETGQA--GPPAGAGVSGRGLPRGVDGQTGSGTV--PGAEGFAGAPGYPKSPPVA 896
G+ G A GPP G G +G +G G PG +G GAPG P P A
Sbjct: 381 PPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPA 440
Query: 897 SPGAP 901
P P
Sbjct: 441 GPHIP 445
Score = 42.0 bits (97), Expect = 0.003
Identities = 38/114 (33%), Positives = 42/114 (36%), Gaps = 16/114 (14%)
Query: 789 PSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAET 848
P P P P P P P + DPG P LP P + P PG G
Sbjct: 1076 PGLPGPKGEPGLP----GYPGNPGIKGSVGDPGL-PGLPGTPGAKGQPGLPGFPGT---- 1126
Query: 849 GQAGPPAGAGVSGR----GLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASP 898
GPP G+SG GLP G G G G PG G G G P + P
Sbjct: 1127 --PGPPGPKGISGPPGNPGLP-GEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGP 1177
Score = 41.2 bits (95), Expect = 0.005
Identities = 32/97 (32%), Positives = 36/97 (37%), Gaps = 15/97 (15%)
Query: 809 PRPSG-PATAEDPGRR--PVLPQRPPEERPPQPPGSTGVIAETGQA------------GP 853
P P G P G R P P P + PP PPG G+ E G G
Sbjct: 116 PGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGY 175
Query: 854 PAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP 890
P G+ G P G+ G G PG G G PG P
Sbjct: 176 PGPPGIQGLPGPTGIPGPIGPPGPPGLMGPPGPPGLP 212
Score = 39.7 bits (91), Expect = 0.015
Identities = 36/147 (24%), Positives = 50/147 (34%), Gaps = 39/147 (26%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTG 843
P + P PP P P E G +PG+R +P ++ PG G
Sbjct: 263 PGDRGPPGPPGIRGPPGPPGGEKGEKGEQG-----EPGKRG----KPGKDGENGQPGIPG 313
Query: 844 VIAETGQAGPPAGAGVSGR-----------------------------GLPRGVDGQTGS 874
+ + G G P G G+ GLP G+ G+ G
Sbjct: 314 LPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLP-GLPGEKGE 372
Query: 875 GTVPGAEGFAGAPGYPKSPPVASPGAP 901
PG +G G PG P + + PG P
Sbjct: 373 RGFPGIQGPPGLPGPPGAAVMGPPGPP 399
Score = 38.9 bits (89), Expect = 0.026
Identities = 39/125 (31%), Positives = 48/125 (38%), Gaps = 12/125 (9%)
Query: 808 PPRPSG-PATAEDPGRRPVLPQRPPEERP--PQPPGSTGVIAETG---QAGPPAGAGVSG 861
PP P G P +PG + P+ P P PPG G+ TG GPP G+ G
Sbjct: 145 PPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPPGLMG 204
Query: 862 RGLPRGVDGQTGSG--TVPGAEGFAGAPGY--PKSPPVASPGAPVPSLVSFSAGLTQKPF 917
P G+ G G+ G +G G G P PP P V F G +
Sbjct: 205 PPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKG--DQGL 262
Query: 918 PSDGG 922
P D G
Sbjct: 263 PGDRG 267
Score = 37.7 bits (86), Expect = 0.057
Identities = 23/62 (37%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Query: 840 GSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPG 899
G G G G P G G PRG G G PG +G G PG P P +PG
Sbjct: 48 GERGFPGLEGHPGLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFP--GTPG 105
Query: 900 AP 901
P
Sbjct: 106 LP 107
Score = 37.4 bits (85), Expect = 0.075
Identities = 51/177 (28%), Positives = 59/177 (33%), Gaps = 60/177 (33%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPAP--------PRPSGP----------ATAEDPGRR-- 823
P SP P E PK P+ P P P GP +PG+
Sbjct: 1236 PPGPPGSPGPALEGPKGNPGPQGPPGRPGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGL 1295
Query: 824 PVLP-----QRPP--EERPPQP--------PGSTGVIAETGQAGP---PAGAGVSGR--- 862
P LP Q PP + P +P PG GV G GP P AG G
Sbjct: 1296 PGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGL 1355
Query: 863 -------GLPRG------VDGQTGSGTVPGAEGFAGAPGYPKSP-----PVASPGAP 901
GLP + G G +PG G G PG P+ P P PG P
Sbjct: 1356 IGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPG-PQGPQGLPGPTGPPGDP 1411
Score = 36.6 bits (83), Expect = 0.13
Identities = 34/125 (27%), Positives = 45/125 (36%), Gaps = 10/125 (8%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTG 843
P K A PK AP P P + +PG P ++ PG+ G
Sbjct: 511 PGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPG 570
Query: 844 VIAETGQAGPPAGAGVSG-RGLPRGVD-----GQTGSGTVPGAEGFAGAPGYPKSPPVAS 897
+ G G G+ G +G P G+ G G+ +PG G G P PP
Sbjct: 571 LPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPGNIG----PMGPPGFG 626
Query: 898 PGAPV 902
P PV
Sbjct: 627 PPGPV 631
Score = 35.8 bits (81), Expect = 0.22
Identities = 39/128 (30%), Positives = 47/128 (36%), Gaps = 22/128 (17%)
Query: 791 PPPPAEAPKEPLQPE----PAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVI- 845
PP P P P P G A A P P +P P P G G I
Sbjct: 492 PPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDIL 551
Query: 846 ------AETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEG------FAGAPGYPKSP 893
+ G+ G P G+ G LP G GQ G +PG +G F G G P +P
Sbjct: 552 TFPGMKGDKGELGSPGAPGLPG--LP-GTPGQDGLPGLPGPKGEPGGITFKGERGPPGNP 608
Query: 894 PVASPGAP 901
+ PG P
Sbjct: 609 GL--PGLP 614
Score = 33.9 bits (76), Expect = 0.83
Identities = 27/89 (30%), Positives = 34/89 (38%), Gaps = 5/89 (5%)
Query: 836 PQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPV 895
P G G+ G GPP G G G+ G G + G G G PG P P +
Sbjct: 53 PGLEGHPGLPGFPGPEGPPGPRGQKGDD---GIPGPPGPKGIRGPPGLPGFPGTPGLPGM 109
Query: 896 -ASPGAPVPSLVSFSAGLT-QKPFPSDGG 922
GAP P + G ++ FP G
Sbjct: 110 PGHDGAPGPQGIPGCNGTKGERGFPGSPG 138
Score = 31.6 bits (70), Expect = 4.1
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 10/60 (16%)
Query: 867 GVDGQTGSGTVPGAEGFAGAPGY--PKSPP--------VASPGAPVPSLVSFSAGLTQKP 916
G+ G+ G PG EG G PG+ P+ PP PG P P + GL P
Sbjct: 42 GIKGEKGERGFPGLEGHPGLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFP 101
>gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo
sapiens]
Length = 1424
Score = 63.5 bits (153), Expect = 1e-09
Identities = 47/141 (33%), Positives = 56/141 (39%), Gaps = 21/141 (14%)
Query: 790 SPPPPAEA-PKEPLQ---PEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVI 845
+P PP EA P+ L P P PP P GP P P + PP PGS G
Sbjct: 635 APGPPGEAGPRGELSVSTPVPGPPGPPGP------------PGHPGPQGPPGIPGSLGKC 682
Query: 846 AETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVAS----PGAP 901
+ G GP G+ G G P G G G PG +G G PG P + PGA
Sbjct: 683 GDPGLPGPDGEPGIPGIGFP-GPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAK 741
Query: 902 VPSLVSFSAGLTQKPFPSDGG 922
V+ G FP + G
Sbjct: 742 GEPAVAMPGGPGTPGFPGERG 762
Score = 53.9 bits (128), Expect = 8e-07
Identities = 41/124 (33%), Positives = 51/124 (41%), Gaps = 12/124 (9%)
Query: 789 PSPPPPAEAP-------KEPLQPEPAPPRPSGPATAED-PGR--RPVLPQRPPEERPPQP 838
P PP P P K+ +P PP GPA E PG P LP +P
Sbjct: 1064 PGPPGPTGDPGLPGDMGKKGEMGQPGPPGHLGPAGPEGAPGSPGSPGLPGKPGPHGDLGF 1123
Query: 839 PGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP--PVA 896
G G++ G GPP G G P G+ G G +PG G G G ++P P
Sbjct: 1124 KGIKGLLGPPGIRGPPGLPGFPGSPGPMGIRGDQGRDGIPGPAGEKGETGLLRAPPGPRG 1183
Query: 897 SPGA 900
+PGA
Sbjct: 1184 NPGA 1187
Score = 53.5 bits (127), Expect = 1e-06
Identities = 47/159 (29%), Positives = 62/159 (38%), Gaps = 22/159 (13%)
Query: 787 KAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRR--------------PVLPQRPPE 832
K P P + + EPA P GP T PG R P LP P
Sbjct: 725 KMGEPGLPGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTPGN 784
Query: 833 ERPPQPPGSTGVIAETGQAGPPAGAGVSG----RGLP--RGVDGQTGSGTVPGAEGFAGA 886
E P G G G+ GPP G + G +GLP G+ GQ G G +G G
Sbjct: 785 EGLDGPRGDPGQPGPPGEQGPP-GRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGDPGI 843
Query: 887 PGYPKSPPVASPGAP-VPSLVSFSAGLTQKPFPSDGGVV 924
PG +S G+P +P L Q+ +P + G++
Sbjct: 844 PGLDRSGFPGETGSPGIPGHQGEMGPLGQRGYPGNPGIL 882
Score = 52.0 bits (123), Expect = 3e-06
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 806 PAPPRPSGPATAE-DPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSG-RG 863
P P P GP DPG ++ P PP PG G+ E G GPP G G RG
Sbjct: 1333 PGPIGPKGPPGVRGDPGTLKII-SLPGSPGPPGTPGEPGMQGEPGPPGPPGNLGPCGPRG 1391
Query: 864 LPRGVDGQTGSGTVPGAEGFAGAPGYPKS 892
P G DG+ G+ G +G G+ G P+S
Sbjct: 1392 KP-GKDGKPGTPGPAGEKGNKGSKGEPES 1419
Score = 51.2 bits (121), Expect = 5e-06
Identities = 34/95 (35%), Positives = 40/95 (42%), Gaps = 15/95 (15%)
Query: 806 PAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLP 865
P PP P G + P P +P P RP G G P G+ G
Sbjct: 359 PGPPGPRGARGPQGPSGPPGVPGSPGSSRP-------------GLRGAPGWPGLKGSKGE 405
Query: 866 RGVDGQTGSGTVPGAEGFAGAPGYPKSP-PVASPG 899
RG G+ GT PG+ G AG+PG P SP P PG
Sbjct: 406 RGRPGKDAMGT-PGSPGCAGSPGLPGSPGPPGPPG 439
Score = 49.7 bits (117), Expect = 1e-05
Identities = 36/115 (31%), Positives = 46/115 (40%), Gaps = 13/115 (11%)
Query: 806 PAPPRPSG-PATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGL 864
P PP P+G P D G++ + Q P PPG G G G P G+ G+
Sbjct: 1064 PGPPGPTGDPGLPGDMGKKGEMGQ-------PGPPGHLGPAGPEGAPGSPGSPGLPGKPG 1116
Query: 865 PRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVPSLVSFSAGLTQKPFPS 919
P G G G + G G G PG P PG+P P + G P P+
Sbjct: 1117 PHGDLGFKGIKGLLGPPGIRGPPGLP-----GFPGSPGPMGIRGDQGRDGIPGPA 1166
Score = 48.9 bits (115), Expect = 2e-05
Identities = 38/111 (34%), Positives = 42/111 (37%), Gaps = 6/111 (5%)
Query: 798 PKEPLQP-EPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAE----TGQAG 852
P +P P P P P+GP P P L P PPG G E T G
Sbjct: 598 PGDPGSPGSPGPAGPAGPP-GYGPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVPG 656
Query: 853 PPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVP 903
PP G G P+G G GS G G G G P P + PG P P
Sbjct: 657 PPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGP 707
Score = 48.5 bits (114), Expect = 3e-05
Identities = 38/112 (33%), Positives = 44/112 (39%), Gaps = 23/112 (20%)
Query: 800 EPLQPEPAPPRPSGPATAEDPGRRPV--LPQRPPEERPPQPPGSTGVIAETGQAGPPAGA 857
E LQPE P P PGR+ + +P P + P P G + E G GPP
Sbjct: 542 ETLQPEGQVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPP--- 598
Query: 858 GVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGY-PKSPP-----VASPGAPVP 903
G GS PG G AG PGY P+ P PGAP P
Sbjct: 599 ------------GDPGSPGSPGPAGPAGPPGYGPQGEPGLQGTQGVPGAPGP 638
Score = 46.6 bits (109), Expect = 1e-04
Identities = 41/133 (30%), Positives = 48/133 (36%), Gaps = 31/133 (23%)
Query: 793 PPAEAPKEPLQPEPAPPRPSG----------PATAEDPGRRPVLPQRPPEERPPQPPGST 842
PP L P P P G P A + G +L PP P G+
Sbjct: 1132 PPGIRGPPGLPGFPGSPGPMGIRGDQGRDGIPGPAGEKGETGLL------RAPPGPRGNP 1185
Query: 843 GVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP----------KS 892
G G G P G+ GR +G G G G EGF G PG P +
Sbjct: 1186 GAQGAKGDRGAPGFPGLPGR---KGAMGDAGPRGPTGIEGFPGPPGLPGAIIPGQTGNRG 1242
Query: 893 PPVA--SPGAPVP 903
PP + SPGAP P
Sbjct: 1243 PPGSRGSPGAPGP 1255
Score = 46.2 bits (108), Expect = 2e-04
Identities = 44/136 (32%), Positives = 51/136 (37%), Gaps = 23/136 (16%)
Query: 789 PSPPPPAEAPKEPLQPEPAPPRPSG----PATAED---PGR--RPVLPQRP--------P 831
P P P P P P PP P G P T PG+ P LP +P P
Sbjct: 685 PGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEP 744
Query: 832 EERPPQPPGSTGVIAETGQAGPPAGAGVSGR-GLP-----RGVDGQTGSGTVPGAEGFAG 885
P PG+ G E G +G G+ G GLP G+DG G PG G G
Sbjct: 745 AVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTPGNEGLDGPRGDPGQPGPPGEQG 804
Query: 886 APGYPKSPPVASPGAP 901
PG P + G P
Sbjct: 805 PPGRCIEGPRGAQGLP 820
Score = 46.2 bits (108), Expect = 2e-04
Identities = 30/73 (41%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 830 PPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGY 889
P E P PG G + GQ G P G+ G P G DG G PGA G G PG
Sbjct: 852 PGETGSPGIPGHQGEMGPLGQRGYPGNPGILG---PPGEDGVIGMMGFPGAIGPPGPPGN 908
Query: 890 PKSP-PVASPGAP 901
P +P SPG P
Sbjct: 909 PGTPGQRGSPGIP 921
Score = 45.8 bits (107), Expect = 2e-04
Identities = 27/64 (42%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 836 PQPPGSTGVIAETGQAGPPAGAGVSG-RGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPP 894
P PPGS G TG G P G G GLP G+ G G + G GF+G+PG P +P
Sbjct: 54 PGPPGSPGQKGFTGPEGLPGPQGPKGFPGLP-GLTGSKGVRGISGLPGFSGSPGLPGTPG 112
Query: 895 VASP 898
P
Sbjct: 113 NTGP 116
Score = 43.9 bits (102), Expect = 8e-04
Identities = 45/137 (32%), Positives = 52/137 (37%), Gaps = 23/137 (16%)
Query: 785 SAKAPSPPPPAEAPKEPLQPE------PAPPRPSGPATAED---PGR--RPVLPQRPPEE 833
S AP PP P + ++ + P P P P TA D PGR P P P
Sbjct: 1249 SPGAPGPPGPPGSHVIGIKGDKGSMGHPGPKGP--PGTAGDMGPPGRLGAPGTPGLPGPR 1306
Query: 834 RPPQPPGSTGVIAE------TGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAP 887
P G GV E G GPP G G P GV G G+ + G G P
Sbjct: 1307 GDPGFQGFPGVKGEKGNPGFLGSIGPPGPIGPKG---PPGVRGDPGTLKIISLPGSPGPP 1363
Query: 888 GYPKSPPV-ASPGAPVP 903
G P P + PG P P
Sbjct: 1364 GTPGEPGMQGEPGPPGP 1380
Score = 43.9 bits (102), Expect = 8e-04
Identities = 41/135 (30%), Positives = 44/135 (32%), Gaps = 6/135 (4%)
Query: 767 SHVFQISTDLQDLVKFQPSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVL 826
SHV I D K P PP P AP P P DPG +
Sbjct: 1261 SHVIGIKGD-----KGSMGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPGPRGDPGFQG-F 1314
Query: 827 PQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGA 886
P E+ P GS G G GPP G G + G G PG G G
Sbjct: 1315 PGVKGEKGNPGFLGSIGPPGPIGPKGPPGVRGDPGTLKIISLPGSPGPPGTPGEPGMQGE 1374
Query: 887 PGYPKSPPVASPGAP 901
PG P P P P
Sbjct: 1375 PGPPGPPGNLGPCGP 1389
Score = 41.2 bits (95), Expect = 0.005
Identities = 36/126 (28%), Positives = 46/126 (36%), Gaps = 29/126 (23%)
Query: 824 PVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTV-----P 878
P LP P + P PPG G + G GPP G G PRG G G +
Sbjct: 173 PGLPGAPGPQGLPGPPGFPGPV---GPPGPPGFFGFPGAMGPRGPKGHMGERVIGHKGER 229
Query: 879 GAEGFAGAPGYPKSPPV---------------------ASPGAPVPSLVSFSAGLTQKPF 917
G +G G PG P + V PG P PS + + ++K
Sbjct: 230 GVKGLTGPPGPPGTVIVTLTGPDNRTDLKGEKGDKGAMGEPGPPGPSGLPGESYGSEKGA 289
Query: 918 PSDGGV 923
P D G+
Sbjct: 290 PGDPGL 295
Score = 41.2 bits (95), Expect = 0.005
Identities = 37/108 (34%), Positives = 43/108 (39%), Gaps = 22/108 (20%)
Query: 811 PSGPATAEDPGRRPVLPQR--PPEERPPQPPGSTGVIAETGQAGPPAGAGVSG-RGLP-- 865
P P PG V+ P PP PPG+ G GQ G P GV G RG P
Sbjct: 876 PGNPGILGPPGEDGVIGMMGFPGAIGPPGPPGNPGT---PGQRGSPGIPGVKGQRGTPGA 932
Query: 866 ---RGVDGQTGSGTV---------PGAEGFAGAPGYPKSPPVASPGAP 901
+G G G + PG +GFAG PG + V PG P
Sbjct: 933 KGEQGDKGNPGPSEISHVIGDKGEPGLKGFAGNPGEKGNRGV--PGMP 978
Score = 41.2 bits (95), Expect = 0.005
Identities = 34/95 (35%), Positives = 39/95 (41%), Gaps = 5/95 (5%)
Query: 811 PSGPATAEDPGRRPVLPQR--PPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGV 868
P GP E P LP P + PPGS G G GPP G+ V G +G
Sbjct: 1214 PRGPTGIEGFPGPPGLPGAIIPGQTGNRGPPGSRGSPGAPGPPGPP-GSHVIGIKGDKGS 1272
Query: 869 DGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVP 903
G G PG G G PG +P +PG P P
Sbjct: 1273 MGHPGPKGPPGTAGDMGPPGRLGAP--GTPGLPGP 1305
Score = 40.8 bits (94), Expect = 0.007
Identities = 26/82 (31%), Positives = 32/82 (39%), Gaps = 12/82 (14%)
Query: 835 PPQPPGSTGVIAETGQAGPPAGAGVSG----RGLP--------RGVDGQTGSGTVPGAEG 882
P PPG G + TG G P G+ G G+P G G+ G +PG G
Sbjct: 989 PAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGFPGRAGRPGLPGIHG 1048
Query: 883 FAGAPGYPKSPPVASPGAPVPS 904
G G P PG P P+
Sbjct: 1049 LQGDKGEPGYSEGTRPGPPGPT 1070
Score = 40.4 bits (93), Expect = 0.009
Identities = 34/109 (31%), Positives = 40/109 (36%), Gaps = 23/109 (21%)
Query: 805 EPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGL 864
EP PP PSG PG E+ P PG G + G G P GV G
Sbjct: 269 EPGPPGPSGL-----PGE-----SYGSEKGAPGDPGLQGKPGKDGVPGFPGSEGVKGN-- 316
Query: 865 PRGVDGQTGSGTVPGAEGFAGAPG----------YPKSPPVASPGAPVP 903
RG G G + G +G G PG Y + +PG P P
Sbjct: 317 -RGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYDTYQEKGDEGTPGPPGP 364
Score = 40.0 bits (92), Expect = 0.012
Identities = 33/97 (34%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 807 APPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPR 866
APP P G +PG + R P PG G G AGP G+ G P
Sbjct: 1177 APPGPRG-----NPGAQGAKGDRGA----PGFPGLPGRKGAMGDAGPRGPTGIEGFPGPP 1227
Query: 867 GVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVP 903
G+ G +PG G G PG SP +PG P P
Sbjct: 1228 GLPG----AIIPGQTGNRGPPGSRGSP--GAPGPPGP 1258
Score = 39.7 bits (91), Expect = 0.015
Identities = 44/143 (30%), Positives = 52/143 (36%), Gaps = 20/143 (13%)
Query: 778 DLVKFQPSAKAPSPPPPAEAPKEPLQPE--PAPPRPSG----PATAEDPGRRPVLPQRPP 831
D K + K PP + K PE P P P G P G R + P
Sbjct: 42 DGAKGEKGEKGFPGPPGSPGQKGFTGPEGLPGPQGPKGFPGLPGLTGSKGVRGI-SGLPG 100
Query: 832 EERPPQPPGSTGVIAETGQAGPPAGAGVSG-RGLPRGVDGQTGSGTVPGAEGFAGAPGYP 890
P PG+ G G G P +G G +G P G+ G G +PGA G G G P
Sbjct: 101 FSGSPGLPGTPGNTGPYGLVGVPGCSGSKGEQGFP-GLPGTLGYPGIPGAAGLKGQKGAP 159
Query: 891 ----------KSPPVASPGAPVP 903
K P PGAP P
Sbjct: 160 AKEEDIELDAKGDP-GLPGAPGP 181
Score = 37.7 bits (86), Expect = 0.057
Identities = 34/117 (29%), Positives = 44/117 (37%), Gaps = 17/117 (14%)
Query: 790 SPPPPAEAPKEPLQPEPAPPRPSGPATAED--PGRRPVLPQRPPEERPPQPPGSTGVIAE 847
+P P A L P PP P G PG + P P PG G E
Sbjct: 416 TPGSPGCAGSPGLPGSPGPPGPPGDIVFRKGPPGDHGL----PGYLGSPGIPGVDGPKGE 471
Query: 848 TGQA--------GPPAGAGVSGRGLPRGVDGQTGSGTV---PGAEGFAGAPGYPKSP 893
G GPP G+ G +G+ G+ G+ + PG+ G G PG+P P
Sbjct: 472 PGLLCTQCPYIPGPPGLPGLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFP 528
Score = 37.7 bits (86), Expect = 0.057
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Query: 836 PQPPGSTGVIAETGQAGPPAGAG-VSGRGLP-----RGVDGQTGSGTVPGAEGFAGAPGY 889
P PG G+ G AGPP G + G P RG+ G G+ +PG++G G G+
Sbjct: 975 PGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGF 1034
Query: 890 PKSPPVASPGAP 901
P PG P
Sbjct: 1035 PGR--AGRPGLP 1044
Score = 37.7 bits (86), Expect = 0.057
Identities = 38/110 (34%), Positives = 42/110 (38%), Gaps = 22/110 (20%)
Query: 809 PRPSGPATAEDPGRRPVLPQ--RPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGR---- 862
P P+GP PG R L P E PGS G + G G G GR
Sbjct: 987 PGPAGP-----PGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGFPGRAGRP 1041
Query: 863 GLP--RGVDGQTG-----SGTVPGAEGFAGAPGYP----KSPPVASPGAP 901
GLP G+ G G GT PG G G PG P K + PG P
Sbjct: 1042 GLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGPP 1091
Score = 37.0 bits (84), Expect = 0.098
Identities = 35/117 (29%), Positives = 42/117 (35%), Gaps = 20/117 (17%)
Query: 805 EPAPPRPSGPA--TAEDPGRRPVLPQ---------RPPEERPPQPPG-----STGVIAET 848
+P PP GP E P LP R + P PG +G ET
Sbjct: 796 QPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGET 855
Query: 849 GQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKS----PPVASPGAP 901
G G P G G RG G G PG +G G G+P + P +PG P
Sbjct: 856 GSPGIPGHQGEMGPLGQRGYPGNPGILGPPGEDGVIGMMGFPGAIGPPGPPGNPGTP 912
Score = 37.0 bits (84), Expect = 0.098
Identities = 34/107 (31%), Positives = 42/107 (39%), Gaps = 12/107 (11%)
Query: 806 PAPP-RPSGPATAEDPGRRPVLPQRPP--------EERPPQPPGSTGVIAETGQAGPPAG 856
P PP P P PG V QR ++ P P + VI + G+ G
Sbjct: 903 PGPPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGEPGLKGF 962
Query: 857 AGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP--PVASPGAP 901
AG G RGV G G + G G AG PG P+ +PG P
Sbjct: 963 AGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPG-PRGDLGSTGNPGEP 1008
Score = 35.8 bits (81), Expect = 0.22
Identities = 31/84 (36%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 820 PGR--RPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTV 877
PGR RP LP + PG +E + GPP G G G G+ G
Sbjct: 1035 PGRAGRPGLPGIHGLQGDKGEPG----YSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGP 1090
Query: 878 PGAEGFAGAPGYPKSPPVASPGAP 901
PG G AG G P SP SPG P
Sbjct: 1091 PGHLGPAGPEGAPGSP--GSPGLP 1112
Score = 34.3 bits (77), Expect = 0.63
Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 9/68 (13%)
Query: 789 PSPPPPAEAPKEP-LQPEPAPPRPSGPATAEDPGRRPVLPQ-RPPEERPPQPPGSTGVIA 846
P P P P EP +Q EP PP P G P P+ +P ++ P PG G
Sbjct: 1357 PGSPGPPGTPGEPGMQGEPGPPGPPG-------NLGPCGPRGKPGKDGKPGTPGPAGEKG 1409
Query: 847 ETGQAGPP 854
G G P
Sbjct: 1410 NKGSKGEP 1417
Score = 33.1 bits (74), Expect = 1.4
Identities = 32/108 (29%), Positives = 38/108 (35%), Gaps = 12/108 (11%)
Query: 789 PSPP--------PPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPG 840
P PP PP + P P GP +PG + Q P PP PG
Sbjct: 435 PGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKG--EPGL--LCTQCPYIPGPPGLPG 490
Query: 841 STGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPG 888
G+ G G AG+ G G G G PGA+G G G
Sbjct: 491 LPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFPGAQGDPGLKG 538
Score = 30.4 bits (67), Expect = 9.2
Identities = 43/142 (30%), Positives = 48/142 (33%), Gaps = 14/142 (9%)
Query: 793 PPAEAPK-EP-LQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQ 850
P + PK EP L P P P PG V P + GS G TG
Sbjct: 463 PGVDGPKGEPGLLCTQCPYIPGPPGLPGLPGLHGV-KGIPGRQGAAGLKGSPGSPGNTGL 521
Query: 851 AGPPAGAGVSGRGLPRGVDGQT----GSGTVPGAEGFAGAP------GYPKSPPVASPGA 900
G P G G +G G+T G VPG G G P G P +P V
Sbjct: 522 PGFPGFPGAQGDPGLKGEKGETLQPEGQVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPG 581
Query: 901 PVPSLVSFSAGLTQKPFPSDGG 922
P L Q P P D G
Sbjct: 582 PKGELALSGEKGDQGP-PGDPG 602
>gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo
sapiens]
Length = 1494
Score = 63.5 bits (153), Expect = 1e-09
Identities = 47/141 (33%), Positives = 56/141 (39%), Gaps = 21/141 (14%)
Query: 790 SPPPPAEA-PKEPLQ---PEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVI 845
+P PP EA P+ L P P PP P GP P P + PP PGS G
Sbjct: 635 APGPPGEAGPRGELSVSTPVPGPPGPPGP------------PGHPGPQGPPGIPGSLGKC 682
Query: 846 AETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVAS----PGAP 901
+ G GP G+ G G P G G G PG +G G PG P + PGA
Sbjct: 683 GDPGLPGPDGEPGIPGIGFP-GPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAK 741
Query: 902 VPSLVSFSAGLTQKPFPSDGG 922
V+ G FP + G
Sbjct: 742 GEPAVAMPGGPGTPGFPGERG 762
Score = 53.9 bits (128), Expect = 8e-07
Identities = 39/124 (31%), Positives = 50/124 (40%), Gaps = 12/124 (9%)
Query: 789 PSPPPPAEAP-------KEPLQPEPAPPR---PSGPATAEDPGRRPVLPQRPPEERPPQP 838
P PP P P K+ +P PP P+GP A P LP +P
Sbjct: 1064 PGPPGPTGDPGLPGDMGKKGEMGQPGPPGHLGPAGPEGAPGSPGSPGLPGKPGPHGDLGF 1123
Query: 839 PGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP--PVA 896
G G++ G GPP G G P G+ G G +PG G G G ++P P
Sbjct: 1124 KGIKGLLGPPGIRGPPGLPGFPGSPGPMGIRGDQGRDGIPGPAGEKGETGLLRAPPGPRG 1183
Query: 897 SPGA 900
+PGA
Sbjct: 1184 NPGA 1187
Score = 53.9 bits (128), Expect = 8e-07
Identities = 36/98 (36%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Query: 806 PAPPRPSGPATAE-DPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGL 864
P P P GP DPG ++ P PP PG G+ E G GPP G G
Sbjct: 1333 PGPIGPKGPPGVRGDPGTLKII-SLPGSPGPPGTPGEPGMQGEPGPPGPPGNLGPCG--- 1388
Query: 865 PRGVDGQTGSGTVPGAEGFAGAPGYPKSP-PVASPGAP 901
PRG G+ G PG G G G P P S G P
Sbjct: 1389 PRGKPGKDGKPGTPGPAGEKGNKGSKGEPGPAGSDGLP 1426
Score = 53.5 bits (127), Expect = 1e-06
Identities = 47/159 (29%), Positives = 62/159 (38%), Gaps = 22/159 (13%)
Query: 787 KAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRR--------------PVLPQRPPE 832
K P P + + EPA P GP T PG R P LP P
Sbjct: 725 KMGEPGLPGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTPGN 784
Query: 833 ERPPQPPGSTGVIAETGQAGPPAGAGVSG----RGLP--RGVDGQTGSGTVPGAEGFAGA 886
E P G G G+ GPP G + G +GLP G+ GQ G G +G G
Sbjct: 785 EGLDGPRGDPGQPGPPGEQGPP-GRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGDPGI 843
Query: 887 PGYPKSPPVASPGAP-VPSLVSFSAGLTQKPFPSDGGVV 924
PG +S G+P +P L Q+ +P + G++
Sbjct: 844 PGLDRSGFPGETGSPGIPGHQGEMGPLGQRGYPGNPGIL 882
Score = 51.2 bits (121), Expect = 5e-06
Identities = 34/95 (35%), Positives = 40/95 (42%), Gaps = 15/95 (15%)
Query: 806 PAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLP 865
P PP P G + P P +P P RP G G P G+ G
Sbjct: 359 PGPPGPRGARGPQGPSGPPGVPGSPGSSRP-------------GLRGAPGWPGLKGSKGE 405
Query: 866 RGVDGQTGSGTVPGAEGFAGAPGYPKSP-PVASPG 899
RG G+ GT PG+ G AG+PG P SP P PG
Sbjct: 406 RGRPGKDAMGT-PGSPGCAGSPGLPGSPGPPGPPG 439
Score = 49.7 bits (117), Expect = 1e-05
Identities = 36/115 (31%), Positives = 46/115 (40%), Gaps = 13/115 (11%)
Query: 806 PAPPRPSG-PATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGL 864
P PP P+G P D G++ + Q P PPG G G G P G+ G+
Sbjct: 1064 PGPPGPTGDPGLPGDMGKKGEMGQ-------PGPPGHLGPAGPEGAPGSPGSPGLPGKPG 1116
Query: 865 PRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVPSLVSFSAGLTQKPFPS 919
P G G G + G G G PG P PG+P P + G P P+
Sbjct: 1117 PHGDLGFKGIKGLLGPPGIRGPPGLP-----GFPGSPGPMGIRGDQGRDGIPGPA 1166
Score = 48.9 bits (115), Expect = 2e-05
Identities = 38/111 (34%), Positives = 42/111 (37%), Gaps = 6/111 (5%)
Query: 798 PKEPLQP-EPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAE----TGQAG 852
P +P P P P P+GP P P L P PPG G E T G
Sbjct: 598 PGDPGSPGSPGPAGPAGPP-GYGPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVPG 656
Query: 853 PPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVP 903
PP G G P+G G GS G G G G P P + PG P P
Sbjct: 657 PPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGP 707
Score = 48.5 bits (114), Expect = 3e-05
Identities = 38/112 (33%), Positives = 44/112 (39%), Gaps = 23/112 (20%)
Query: 800 EPLQPEPAPPRPSGPATAEDPGRRPV--LPQRPPEERPPQPPGSTGVIAETGQAGPPAGA 857
E LQPE P P PGR+ + +P P + P P G + E G GPP
Sbjct: 542 ETLQPEGQVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPP--- 598
Query: 858 GVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGY-PKSPP-----VASPGAPVP 903
G GS PG G AG PGY P+ P PGAP P
Sbjct: 599 ------------GDPGSPGSPGPAGPAGPPGYGPQGEPGLQGTQGVPGAPGP 638
Score = 48.1 bits (113), Expect = 4e-05
Identities = 33/105 (31%), Positives = 38/105 (36%), Gaps = 10/105 (9%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTG 843
P P PP L+ P P P T +PG + E PP PPG+ G
Sbjct: 1333 PGPIGPKGPPGVRGDPGTLKIISLPGSPGPPGTPGEPGMQG-------EPGPPGPPGNLG 1385
Query: 844 VIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPG 888
G+ G G G P G G GS PG G G PG
Sbjct: 1386 PCGPRGKPGKDGKPGTPG---PAGEKGNKGSKGEPGPAGSDGLPG 1427
Score = 46.6 bits (109), Expect = 1e-04
Identities = 41/133 (30%), Positives = 48/133 (36%), Gaps = 31/133 (23%)
Query: 793 PPAEAPKEPLQPEPAPPRPSG----------PATAEDPGRRPVLPQRPPEERPPQPPGST 842
PP L P P P G P A + G +L PP P G+
Sbjct: 1132 PPGIRGPPGLPGFPGSPGPMGIRGDQGRDGIPGPAGEKGETGLL------RAPPGPRGNP 1185
Query: 843 GVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP----------KS 892
G G G P G+ GR +G G G G EGF G PG P +
Sbjct: 1186 GAQGAKGDRGAPGFPGLPGR---KGAMGDAGPRGPTGIEGFPGPPGLPGAIIPGQTGNRG 1242
Query: 893 PPVA--SPGAPVP 903
PP + SPGAP P
Sbjct: 1243 PPGSRGSPGAPGP 1255
Score = 46.2 bits (108), Expect = 2e-04
Identities = 44/136 (32%), Positives = 51/136 (37%), Gaps = 23/136 (16%)
Query: 789 PSPPPPAEAPKEPLQPEPAPPRPSG----PATAED---PGR--RPVLPQRP--------P 831
P P P P P P PP P G P T PG+ P LP +P P
Sbjct: 685 PGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEP 744
Query: 832 EERPPQPPGSTGVIAETGQAGPPAGAGVSGR-GLP-----RGVDGQTGSGTVPGAEGFAG 885
P PG+ G E G +G G+ G GLP G+DG G PG G G
Sbjct: 745 AVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTPGNEGLDGPRGDPGQPGPPGEQG 804
Query: 886 APGYPKSPPVASPGAP 901
PG P + G P
Sbjct: 805 PPGRCIEGPRGAQGLP 820
Score = 46.2 bits (108), Expect = 2e-04
Identities = 30/73 (41%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 830 PPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGY 889
P E P PG G + GQ G P G+ G P G DG G PGA G G PG
Sbjct: 852 PGETGSPGIPGHQGEMGPLGQRGYPGNPGILG---PPGEDGVIGMMGFPGAIGPPGPPGN 908
Query: 890 PKSP-PVASPGAP 901
P +P SPG P
Sbjct: 909 PGTPGQRGSPGIP 921
Score = 45.8 bits (107), Expect = 2e-04
Identities = 27/64 (42%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 836 PQPPGSTGVIAETGQAGPPAGAGVSG-RGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPP 894
P PPGS G TG G P G G GLP G+ G G + G GF+G+PG P +P
Sbjct: 54 PGPPGSPGQKGFTGPEGLPGPQGPKGFPGLP-GLTGSKGVRGISGLPGFSGSPGLPGTPG 112
Query: 895 VASP 898
P
Sbjct: 113 NTGP 116
Score = 45.8 bits (107), Expect = 2e-04
Identities = 37/123 (30%), Positives = 46/123 (37%), Gaps = 9/123 (7%)
Query: 789 PSPPPPAEAPKEP-LQPEPAPPRPSGPATAEDPGRRPVLPQ-RPPEERPPQPPGSTGVIA 846
P P P P EP +Q EP PP P G P P+ +P ++ P PG G
Sbjct: 1357 PGSPGPPGTPGEPGMQGEPGPPGPPG-------NLGPCGPRGKPGKDGKPGTPGPAGEKG 1409
Query: 847 ETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVPSLV 906
G G P AG G +G G +GS GF + + P VP
Sbjct: 1410 NKGSKGEPGPAGSDGLPGLKGKRGDSGSPATWTTRGFVFTRHSQTTAIPSCPEGTVPLYS 1469
Query: 907 SFS 909
FS
Sbjct: 1470 GFS 1472
Score = 43.9 bits (102), Expect = 8e-04
Identities = 45/137 (32%), Positives = 52/137 (37%), Gaps = 23/137 (16%)
Query: 785 SAKAPSPPPPAEAPKEPLQPE------PAPPRPSGPATAED---PGR--RPVLPQRPPEE 833
S AP PP P + ++ + P P P P TA D PGR P P P
Sbjct: 1249 SPGAPGPPGPPGSHVIGIKGDKGSMGHPGPKGP--PGTAGDMGPPGRLGAPGTPGLPGPR 1306
Query: 834 RPPQPPGSTGVIAE------TGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAP 887
P G GV E G GPP G G P GV G G+ + G G P
Sbjct: 1307 GDPGFQGFPGVKGEKGNPGFLGSIGPPGPIGPKG---PPGVRGDPGTLKIISLPGSPGPP 1363
Query: 888 GYPKSPPV-ASPGAPVP 903
G P P + PG P P
Sbjct: 1364 GTPGEPGMQGEPGPPGP 1380
Score = 43.9 bits (102), Expect = 8e-04
Identities = 41/135 (30%), Positives = 44/135 (32%), Gaps = 6/135 (4%)
Query: 767 SHVFQISTDLQDLVKFQPSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVL 826
SHV I D K P PP P AP P P DPG +
Sbjct: 1261 SHVIGIKGD-----KGSMGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPGPRGDPGFQG-F 1314
Query: 827 PQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGA 886
P E+ P GS G G GPP G G + G G PG G G
Sbjct: 1315 PGVKGEKGNPGFLGSIGPPGPIGPKGPPGVRGDPGTLKIISLPGSPGPPGTPGEPGMQGE 1374
Query: 887 PGYPKSPPVASPGAP 901
PG P P P P
Sbjct: 1375 PGPPGPPGNLGPCGP 1389
Score = 41.2 bits (95), Expect = 0.005
Identities = 36/126 (28%), Positives = 46/126 (36%), Gaps = 29/126 (23%)
Query: 824 PVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTV-----P 878
P LP P + P PPG G + G GPP G G PRG G G +
Sbjct: 173 PGLPGAPGPQGLPGPPGFPGPV---GPPGPPGFFGFPGAMGPRGPKGHMGERVIGHKGER 229
Query: 879 GAEGFAGAPGYPKSPPV---------------------ASPGAPVPSLVSFSAGLTQKPF 917
G +G G PG P + V PG P PS + + ++K
Sbjct: 230 GVKGLTGPPGPPGTVIVTLTGPDNRTDLKGEKGDKGAMGEPGPPGPSGLPGESYGSEKGA 289
Query: 918 PSDGGV 923
P D G+
Sbjct: 290 PGDPGL 295
Score = 41.2 bits (95), Expect = 0.005
Identities = 37/108 (34%), Positives = 43/108 (39%), Gaps = 22/108 (20%)
Query: 811 PSGPATAEDPGRRPVLPQR--PPEERPPQPPGSTGVIAETGQAGPPAGAGVSG-RGLP-- 865
P P PG V+ P PP PPG+ G GQ G P GV G RG P
Sbjct: 876 PGNPGILGPPGEDGVIGMMGFPGAIGPPGPPGNPGT---PGQRGSPGIPGVKGQRGTPGA 932
Query: 866 ---RGVDGQTGSGTV---------PGAEGFAGAPGYPKSPPVASPGAP 901
+G G G + PG +GFAG PG + V PG P
Sbjct: 933 KGEQGDKGNPGPSEISHVIGDKGEPGLKGFAGNPGEKGNRGV--PGMP 978
Score = 41.2 bits (95), Expect = 0.005
Identities = 34/95 (35%), Positives = 39/95 (41%), Gaps = 5/95 (5%)
Query: 811 PSGPATAEDPGRRPVLPQR--PPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGV 868
P GP E P LP P + PPGS G G GPP G+ V G +G
Sbjct: 1214 PRGPTGIEGFPGPPGLPGAIIPGQTGNRGPPGSRGSPGAPGPPGPP-GSHVIGIKGDKGS 1272
Query: 869 DGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVP 903
G G PG G G PG +P +PG P P
Sbjct: 1273 MGHPGPKGPPGTAGDMGPPGRLGAP--GTPGLPGP 1305
Score = 40.8 bits (94), Expect = 0.007
Identities = 26/82 (31%), Positives = 32/82 (39%), Gaps = 12/82 (14%)
Query: 835 PPQPPGSTGVIAETGQAGPPAGAGVSG----RGLP--------RGVDGQTGSGTVPGAEG 882
P PPG G + TG G P G+ G G+P G G+ G +PG G
Sbjct: 989 PAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGFPGRAGRPGLPGIHG 1048
Query: 883 FAGAPGYPKSPPVASPGAPVPS 904
G G P PG P P+
Sbjct: 1049 LQGDKGEPGYSEGTRPGPPGPT 1070
Score = 40.4 bits (93), Expect = 0.009
Identities = 34/109 (31%), Positives = 40/109 (36%), Gaps = 23/109 (21%)
Query: 805 EPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGL 864
EP PP PSG PG E+ P PG G + G G P GV G
Sbjct: 269 EPGPPGPSGL-----PGE-----SYGSEKGAPGDPGLQGKPGKDGVPGFPGSEGVKGN-- 316
Query: 865 PRGVDGQTGSGTVPGAEGFAGAPG----------YPKSPPVASPGAPVP 903
RG G G + G +G G PG Y + +PG P P
Sbjct: 317 -RGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYDTYQEKGDEGTPGPPGP 364
Score = 40.0 bits (92), Expect = 0.012
Identities = 33/97 (34%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 807 APPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPR 866
APP P G +PG + R P PG G G AGP G+ G P
Sbjct: 1177 APPGPRG-----NPGAQGAKGDRGA----PGFPGLPGRKGAMGDAGPRGPTGIEGFPGPP 1227
Query: 867 GVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVP 903
G+ G +PG G G PG SP +PG P P
Sbjct: 1228 GLPG----AIIPGQTGNRGPPGSRGSP--GAPGPPGP 1258
Score = 39.7 bits (91), Expect = 0.015
Identities = 44/143 (30%), Positives = 52/143 (36%), Gaps = 20/143 (13%)
Query: 778 DLVKFQPSAKAPSPPPPAEAPKEPLQPE--PAPPRPSG----PATAEDPGRRPVLPQRPP 831
D K + K PP + K PE P P P G P G R + P
Sbjct: 42 DGAKGEKGEKGFPGPPGSPGQKGFTGPEGLPGPQGPKGFPGLPGLTGSKGVRGI-SGLPG 100
Query: 832 EERPPQPPGSTGVIAETGQAGPPAGAGVSG-RGLPRGVDGQTGSGTVPGAEGFAGAPGYP 890
P PG+ G G G P +G G +G P G+ G G +PGA G G G P
Sbjct: 101 FSGSPGLPGTPGNTGPYGLVGVPGCSGSKGEQGFP-GLPGTLGYPGIPGAAGLKGQKGAP 159
Query: 891 ----------KSPPVASPGAPVP 903
K P PGAP P
Sbjct: 160 AKEEDIELDAKGDP-GLPGAPGP 181
Score = 37.7 bits (86), Expect = 0.057
Identities = 34/117 (29%), Positives = 44/117 (37%), Gaps = 17/117 (14%)
Query: 790 SPPPPAEAPKEPLQPEPAPPRPSGPATAED--PGRRPVLPQRPPEERPPQPPGSTGVIAE 847
+P P A L P PP P G PG + P P PG G E
Sbjct: 416 TPGSPGCAGSPGLPGSPGPPGPPGDIVFRKGPPGDHGL----PGYLGSPGIPGVDGPKGE 471
Query: 848 TGQA--------GPPAGAGVSGRGLPRGVDGQTGSGTV---PGAEGFAGAPGYPKSP 893
G GPP G+ G +G+ G+ G+ + PG+ G G PG+P P
Sbjct: 472 PGLLCTQCPYIPGPPGLPGLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFP 528
Score = 37.7 bits (86), Expect = 0.057
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Query: 836 PQPPGSTGVIAETGQAGPPAGAG-VSGRGLP-----RGVDGQTGSGTVPGAEGFAGAPGY 889
P PG G+ G AGPP G + G P RG+ G G+ +PG++G G G+
Sbjct: 975 PGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGF 1034
Query: 890 PKSPPVASPGAP 901
P PG P
Sbjct: 1035 PGR--AGRPGLP 1044
Score = 37.7 bits (86), Expect = 0.057
Identities = 38/110 (34%), Positives = 42/110 (38%), Gaps = 22/110 (20%)
Query: 809 PRPSGPATAEDPGRRPVLPQ--RPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGR---- 862
P P+GP PG R L P E PGS G + G G G GR
Sbjct: 987 PGPAGP-----PGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGFPGRAGRP 1041
Query: 863 GLP--RGVDGQTG-----SGTVPGAEGFAGAPGYP----KSPPVASPGAP 901
GLP G+ G G GT PG G G PG P K + PG P
Sbjct: 1042 GLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGPP 1091
Score = 37.0 bits (84), Expect = 0.098
Identities = 35/117 (29%), Positives = 42/117 (35%), Gaps = 20/117 (17%)
Query: 805 EPAPPRPSGPA--TAEDPGRRPVLPQ---------RPPEERPPQPPG-----STGVIAET 848
+P PP GP E P LP R + P PG +G ET
Sbjct: 796 QPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGET 855
Query: 849 GQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKS----PPVASPGAP 901
G G P G G RG G G PG +G G G+P + P +PG P
Sbjct: 856 GSPGIPGHQGEMGPLGQRGYPGNPGILGPPGEDGVIGMMGFPGAIGPPGPPGNPGTP 912
Score = 37.0 bits (84), Expect = 0.098
Identities = 34/107 (31%), Positives = 42/107 (39%), Gaps = 12/107 (11%)
Query: 806 PAPP-RPSGPATAEDPGRRPVLPQRPP--------EERPPQPPGSTGVIAETGQAGPPAG 856
P PP P P PG V QR ++ P P + VI + G+ G
Sbjct: 903 PGPPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGEPGLKGF 962
Query: 857 AGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP--PVASPGAP 901
AG G RGV G G + G G AG PG P+ +PG P
Sbjct: 963 AGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPG-PRGDLGSTGNPGEP 1008
Score = 35.8 bits (81), Expect = 0.22
Identities = 31/84 (36%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 820 PGR--RPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTV 877
PGR RP LP + PG +E + GPP G G G G+ G
Sbjct: 1035 PGRAGRPGLPGIHGLQGDKGEPG----YSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGP 1090
Query: 878 PGAEGFAGAPGYPKSPPVASPGAP 901
PG G AG G P SP SPG P
Sbjct: 1091 PGHLGPAGPEGAPGSP--GSPGLP 1112
Score = 33.1 bits (74), Expect = 1.4
Identities = 32/108 (29%), Positives = 38/108 (35%), Gaps = 12/108 (11%)
Query: 789 PSPP--------PPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPG 840
P PP PP + P P GP +PG + Q P PP PG
Sbjct: 435 PGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKG--EPGL--LCTQCPYIPGPPGLPG 490
Query: 841 STGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPG 888
G+ G G AG+ G G G G PGA+G G G
Sbjct: 491 LPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFPGAQGDPGLKG 538
Score = 30.4 bits (67), Expect = 9.2
Identities = 43/142 (30%), Positives = 48/142 (33%), Gaps = 14/142 (9%)
Query: 793 PPAEAPK-EP-LQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQ 850
P + PK EP L P P P PG V P + GS G TG
Sbjct: 463 PGVDGPKGEPGLLCTQCPYIPGPPGLPGLPGLHGV-KGIPGRQGAAGLKGSPGSPGNTGL 521
Query: 851 AGPPAGAGVSGRGLPRGVDGQT----GSGTVPGAEGFAGAP------GYPKSPPVASPGA 900
G P G G +G G+T G VPG G G P G P +P V
Sbjct: 522 PGFPGFPGAQGDPGLKGEKGETLQPEGQVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPG 581
Query: 901 PVPSLVSFSAGLTQKPFPSDGG 922
P L Q P P D G
Sbjct: 582 PKGELALSGEKGDQGP-PGDPG 602
>gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo
sapiens]
Length = 1637
Score = 63.5 bits (153), Expect = 1e-09
Identities = 47/141 (33%), Positives = 56/141 (39%), Gaps = 21/141 (14%)
Query: 790 SPPPPAEA-PKEPLQ---PEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVI 845
+P PP EA P+ L P P PP P GP P P + PP PGS G
Sbjct: 635 APGPPGEAGPRGELSVSTPVPGPPGPPGP------------PGHPGPQGPPGIPGSLGKC 682
Query: 846 AETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVAS----PGAP 901
+ G GP G+ G G P G G G PG +G G PG P + PGA
Sbjct: 683 GDPGLPGPDGEPGIPGIGFP-GPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAK 741
Query: 902 VPSLVSFSAGLTQKPFPSDGG 922
V+ G FP + G
Sbjct: 742 GEPAVAMPGGPGTPGFPGERG 762
Score = 53.9 bits (128), Expect = 8e-07
Identities = 39/124 (31%), Positives = 50/124 (40%), Gaps = 12/124 (9%)
Query: 789 PSPPPPAEAP-------KEPLQPEPAPPR---PSGPATAEDPGRRPVLPQRPPEERPPQP 838
P PP P P K+ +P PP P+GP A P LP +P
Sbjct: 1064 PGPPGPTGDPGLPGDMGKKGEMGQPGPPGHLGPAGPEGAPGSPGSPGLPGKPGPHGDLGF 1123
Query: 839 PGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP--PVA 896
G G++ G GPP G G P G+ G G +PG G G G ++P P
Sbjct: 1124 KGIKGLLGPPGIRGPPGLPGFPGSPGPMGIRGDQGRDGIPGPAGEKGETGLLRAPPGPRG 1183
Query: 897 SPGA 900
+PGA
Sbjct: 1184 NPGA 1187
Score = 53.9 bits (128), Expect = 8e-07
Identities = 36/98 (36%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Query: 806 PAPPRPSGPATAE-DPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGL 864
P P P GP DPG ++ P PP PG G+ E G GPP G G
Sbjct: 1333 PGPIGPKGPPGVRGDPGTLKII-SLPGSPGPPGTPGEPGMQGEPGPPGPPGNLGPCG--- 1388
Query: 865 PRGVDGQTGSGTVPGAEGFAGAPGYPKSP-PVASPGAP 901
PRG G+ G PG G G G P P S G P
Sbjct: 1389 PRGKPGKDGKPGTPGPAGEKGNKGSKGEPGPAGSDGLP 1426
Score = 53.5 bits (127), Expect = 1e-06
Identities = 47/159 (29%), Positives = 62/159 (38%), Gaps = 22/159 (13%)
Query: 787 KAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRR--------------PVLPQRPPE 832
K P P + + EPA P GP T PG R P LP P
Sbjct: 725 KMGEPGLPGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTPGN 784
Query: 833 ERPPQPPGSTGVIAETGQAGPPAGAGVSG----RGLP--RGVDGQTGSGTVPGAEGFAGA 886
E P G G G+ GPP G + G +GLP G+ GQ G G +G G
Sbjct: 785 EGLDGPRGDPGQPGPPGEQGPP-GRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGDPGI 843
Query: 887 PGYPKSPPVASPGAP-VPSLVSFSAGLTQKPFPSDGGVV 924
PG +S G+P +P L Q+ +P + G++
Sbjct: 844 PGLDRSGFPGETGSPGIPGHQGEMGPLGQRGYPGNPGIL 882
Score = 51.2 bits (121), Expect = 5e-06
Identities = 34/95 (35%), Positives = 40/95 (42%), Gaps = 15/95 (15%)
Query: 806 PAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLP 865
P PP P G + P P +P P RP G G P G+ G
Sbjct: 359 PGPPGPRGARGPQGPSGPPGVPGSPGSSRP-------------GLRGAPGWPGLKGSKGE 405
Query: 866 RGVDGQTGSGTVPGAEGFAGAPGYPKSP-PVASPG 899
RG G+ GT PG+ G AG+PG P SP P PG
Sbjct: 406 RGRPGKDAMGT-PGSPGCAGSPGLPGSPGPPGPPG 439
Score = 49.7 bits (117), Expect = 1e-05
Identities = 36/115 (31%), Positives = 46/115 (40%), Gaps = 13/115 (11%)
Query: 806 PAPPRPSG-PATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGL 864
P PP P+G P D G++ + Q P PPG G G G P G+ G+
Sbjct: 1064 PGPPGPTGDPGLPGDMGKKGEMGQ-------PGPPGHLGPAGPEGAPGSPGSPGLPGKPG 1116
Query: 865 PRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVPSLVSFSAGLTQKPFPS 919
P G G G + G G G PG P PG+P P + G P P+
Sbjct: 1117 PHGDLGFKGIKGLLGPPGIRGPPGLP-----GFPGSPGPMGIRGDQGRDGIPGPA 1166
Score = 48.9 bits (115), Expect = 2e-05
Identities = 38/111 (34%), Positives = 42/111 (37%), Gaps = 6/111 (5%)
Query: 798 PKEPLQP-EPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAE----TGQAG 852
P +P P P P P+GP P P L P PPG G E T G
Sbjct: 598 PGDPGSPGSPGPAGPAGPP-GYGPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVPG 656
Query: 853 PPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVP 903
PP G G P+G G GS G G G G P P + PG P P
Sbjct: 657 PPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGP 707
Score = 48.5 bits (114), Expect = 3e-05
Identities = 38/112 (33%), Positives = 44/112 (39%), Gaps = 23/112 (20%)
Query: 800 EPLQPEPAPPRPSGPATAEDPGRRPV--LPQRPPEERPPQPPGSTGVIAETGQAGPPAGA 857
E LQPE P P PGR+ + +P P + P P G + E G GPP
Sbjct: 542 ETLQPEGQVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPP--- 598
Query: 858 GVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGY-PKSPP-----VASPGAPVP 903
G GS PG G AG PGY P+ P PGAP P
Sbjct: 599 ------------GDPGSPGSPGPAGPAGPPGYGPQGEPGLQGTQGVPGAPGP 638
Score = 48.1 bits (113), Expect = 4e-05
Identities = 33/105 (31%), Positives = 38/105 (36%), Gaps = 10/105 (9%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTG 843
P P PP L+ P P P T +PG + E PP PPG+ G
Sbjct: 1333 PGPIGPKGPPGVRGDPGTLKIISLPGSPGPPGTPGEPGMQG-------EPGPPGPPGNLG 1385
Query: 844 VIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPG 888
G+ G G G P G G GS PG G G PG
Sbjct: 1386 PCGPRGKPGKDGKPGTPG---PAGEKGNKGSKGEPGPAGSDGLPG 1427
Score = 46.6 bits (109), Expect = 1e-04
Identities = 41/133 (30%), Positives = 48/133 (36%), Gaps = 31/133 (23%)
Query: 793 PPAEAPKEPLQPEPAPPRPSG----------PATAEDPGRRPVLPQRPPEERPPQPPGST 842
PP L P P P G P A + G +L PP P G+
Sbjct: 1132 PPGIRGPPGLPGFPGSPGPMGIRGDQGRDGIPGPAGEKGETGLL------RAPPGPRGNP 1185
Query: 843 GVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP----------KS 892
G G G P G+ GR +G G G G EGF G PG P +
Sbjct: 1186 GAQGAKGDRGAPGFPGLPGR---KGAMGDAGPRGPTGIEGFPGPPGLPGAIIPGQTGNRG 1242
Query: 893 PPVA--SPGAPVP 903
PP + SPGAP P
Sbjct: 1243 PPGSRGSPGAPGP 1255
Score = 46.2 bits (108), Expect = 2e-04
Identities = 44/136 (32%), Positives = 51/136 (37%), Gaps = 23/136 (16%)
Query: 789 PSPPPPAEAPKEPLQPEPAPPRPSG----PATAED---PGR--RPVLPQRP--------P 831
P P P P P P PP P G P T PG+ P LP +P P
Sbjct: 685 PGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEP 744
Query: 832 EERPPQPPGSTGVIAETGQAGPPAGAGVSGR-GLP-----RGVDGQTGSGTVPGAEGFAG 885
P PG+ G E G +G G+ G GLP G+DG G PG G G
Sbjct: 745 AVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTPGNEGLDGPRGDPGQPGPPGEQG 804
Query: 886 APGYPKSPPVASPGAP 901
PG P + G P
Sbjct: 805 PPGRCIEGPRGAQGLP 820
Score = 46.2 bits (108), Expect = 2e-04
Identities = 30/73 (41%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 830 PPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGY 889
P E P PG G + GQ G P G+ G P G DG G PGA G G PG
Sbjct: 852 PGETGSPGIPGHQGEMGPLGQRGYPGNPGILG---PPGEDGVIGMMGFPGAIGPPGPPGN 908
Query: 890 PKSP-PVASPGAP 901
P +P SPG P
Sbjct: 909 PGTPGQRGSPGIP 921
Score = 45.8 bits (107), Expect = 2e-04
Identities = 27/64 (42%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 836 PQPPGSTGVIAETGQAGPPAGAGVSG-RGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPP 894
P PPGS G TG G P G G GLP G+ G G + G GF+G+PG P +P
Sbjct: 54 PGPPGSPGQKGFTGPEGLPGPQGPKGFPGLP-GLTGSKGVRGISGLPGFSGSPGLPGTPG 112
Query: 895 VASP 898
P
Sbjct: 113 NTGP 116
Score = 45.8 bits (107), Expect = 2e-04
Identities = 37/123 (30%), Positives = 46/123 (37%), Gaps = 9/123 (7%)
Query: 789 PSPPPPAEAPKEP-LQPEPAPPRPSGPATAEDPGRRPVLPQ-RPPEERPPQPPGSTGVIA 846
P P P P EP +Q EP PP P G P P+ +P ++ P PG G
Sbjct: 1357 PGSPGPPGTPGEPGMQGEPGPPGPPG-------NLGPCGPRGKPGKDGKPGTPGPAGEKG 1409
Query: 847 ETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVPSLV 906
G G P AG G +G G +GS GF + + P VP
Sbjct: 1410 NKGSKGEPGPAGSDGLPGLKGKRGDSGSPATWTTRGFVFTRHSQTTAIPSCPEGTVPLYS 1469
Query: 907 SFS 909
FS
Sbjct: 1470 GFS 1472
Score = 43.9 bits (102), Expect = 8e-04
Identities = 45/137 (32%), Positives = 52/137 (37%), Gaps = 23/137 (16%)
Query: 785 SAKAPSPPPPAEAPKEPLQPE------PAPPRPSGPATAED---PGR--RPVLPQRPPEE 833
S AP PP P + ++ + P P P P TA D PGR P P P
Sbjct: 1249 SPGAPGPPGPPGSHVIGIKGDKGSMGHPGPKGP--PGTAGDMGPPGRLGAPGTPGLPGPR 1306
Query: 834 RPPQPPGSTGVIAE------TGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAP 887
P G GV E G GPP G G P GV G G+ + G G P
Sbjct: 1307 GDPGFQGFPGVKGEKGNPGFLGSIGPPGPIGPKG---PPGVRGDPGTLKIISLPGSPGPP 1363
Query: 888 GYPKSPPV-ASPGAPVP 903
G P P + PG P P
Sbjct: 1364 GTPGEPGMQGEPGPPGP 1380
Score = 43.9 bits (102), Expect = 8e-04
Identities = 41/135 (30%), Positives = 44/135 (32%), Gaps = 6/135 (4%)
Query: 767 SHVFQISTDLQDLVKFQPSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVL 826
SHV I D K P PP P AP P P DPG +
Sbjct: 1261 SHVIGIKGD-----KGSMGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPGPRGDPGFQG-F 1314
Query: 827 PQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGA 886
P E+ P GS G G GPP G G + G G PG G G
Sbjct: 1315 PGVKGEKGNPGFLGSIGPPGPIGPKGPPGVRGDPGTLKIISLPGSPGPPGTPGEPGMQGE 1374
Query: 887 PGYPKSPPVASPGAP 901
PG P P P P
Sbjct: 1375 PGPPGPPGNLGPCGP 1389
Score = 41.2 bits (95), Expect = 0.005
Identities = 36/126 (28%), Positives = 46/126 (36%), Gaps = 29/126 (23%)
Query: 824 PVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTV-----P 878
P LP P + P PPG G + G GPP G G PRG G G +
Sbjct: 173 PGLPGAPGPQGLPGPPGFPGPV---GPPGPPGFFGFPGAMGPRGPKGHMGERVIGHKGER 229
Query: 879 GAEGFAGAPGYPKSPPV---------------------ASPGAPVPSLVSFSAGLTQKPF 917
G +G G PG P + V PG P PS + + ++K
Sbjct: 230 GVKGLTGPPGPPGTVIVTLTGPDNRTDLKGEKGDKGAMGEPGPPGPSGLPGESYGSEKGA 289
Query: 918 PSDGGV 923
P D G+
Sbjct: 290 PGDPGL 295
Score = 41.2 bits (95), Expect = 0.005
Identities = 37/108 (34%), Positives = 43/108 (39%), Gaps = 22/108 (20%)
Query: 811 PSGPATAEDPGRRPVLPQR--PPEERPPQPPGSTGVIAETGQAGPPAGAGVSG-RGLP-- 865
P P PG V+ P PP PPG+ G GQ G P GV G RG P
Sbjct: 876 PGNPGILGPPGEDGVIGMMGFPGAIGPPGPPGNPGT---PGQRGSPGIPGVKGQRGTPGA 932
Query: 866 ---RGVDGQTGSGTV---------PGAEGFAGAPGYPKSPPVASPGAP 901
+G G G + PG +GFAG PG + V PG P
Sbjct: 933 KGEQGDKGNPGPSEISHVIGDKGEPGLKGFAGNPGEKGNRGV--PGMP 978
Score = 41.2 bits (95), Expect = 0.005
Identities = 34/95 (35%), Positives = 39/95 (41%), Gaps = 5/95 (5%)
Query: 811 PSGPATAEDPGRRPVLPQR--PPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGV 868
P GP E P LP P + PPGS G G GPP G+ V G +G
Sbjct: 1214 PRGPTGIEGFPGPPGLPGAIIPGQTGNRGPPGSRGSPGAPGPPGPP-GSHVIGIKGDKGS 1272
Query: 869 DGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVP 903
G G PG G G PG +P +PG P P
Sbjct: 1273 MGHPGPKGPPGTAGDMGPPGRLGAP--GTPGLPGP 1305
Score = 40.8 bits (94), Expect = 0.007
Identities = 26/82 (31%), Positives = 32/82 (39%), Gaps = 12/82 (14%)
Query: 835 PPQPPGSTGVIAETGQAGPPAGAGVSG----RGLP--------RGVDGQTGSGTVPGAEG 882
P PPG G + TG G P G+ G G+P G G+ G +PG G
Sbjct: 989 PAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGFPGRAGRPGLPGIHG 1048
Query: 883 FAGAPGYPKSPPVASPGAPVPS 904
G G P PG P P+
Sbjct: 1049 LQGDKGEPGYSEGTRPGPPGPT 1070
Score = 40.4 bits (93), Expect = 0.009
Identities = 34/109 (31%), Positives = 40/109 (36%), Gaps = 23/109 (21%)
Query: 805 EPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGL 864
EP PP PSG PG E+ P PG G + G G P GV G
Sbjct: 269 EPGPPGPSGL-----PGE-----SYGSEKGAPGDPGLQGKPGKDGVPGFPGSEGVKGN-- 316
Query: 865 PRGVDGQTGSGTVPGAEGFAGAPG----------YPKSPPVASPGAPVP 903
RG G G + G +G G PG Y + +PG P P
Sbjct: 317 -RGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYDTYQEKGDEGTPGPPGP 364
Score = 40.0 bits (92), Expect = 0.012
Identities = 33/97 (34%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 807 APPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPR 866
APP P G +PG + R P PG G G AGP G+ G P
Sbjct: 1177 APPGPRG-----NPGAQGAKGDRGA----PGFPGLPGRKGAMGDAGPRGPTGIEGFPGPP 1227
Query: 867 GVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVP 903
G+ G +PG G G PG SP +PG P P
Sbjct: 1228 GLPG----AIIPGQTGNRGPPGSRGSP--GAPGPPGP 1258
Score = 39.7 bits (91), Expect = 0.015
Identities = 44/143 (30%), Positives = 52/143 (36%), Gaps = 20/143 (13%)
Query: 778 DLVKFQPSAKAPSPPPPAEAPKEPLQPE--PAPPRPSG----PATAEDPGRRPVLPQRPP 831
D K + K PP + K PE P P P G P G R + P
Sbjct: 42 DGAKGEKGEKGFPGPPGSPGQKGFTGPEGLPGPQGPKGFPGLPGLTGSKGVRGI-SGLPG 100
Query: 832 EERPPQPPGSTGVIAETGQAGPPAGAGVSG-RGLPRGVDGQTGSGTVPGAEGFAGAPGYP 890
P PG+ G G G P +G G +G P G+ G G +PGA G G G P
Sbjct: 101 FSGSPGLPGTPGNTGPYGLVGVPGCSGSKGEQGFP-GLPGTLGYPGIPGAAGLKGQKGAP 159
Query: 891 ----------KSPPVASPGAPVP 903
K P PGAP P
Sbjct: 160 AKEEDIELDAKGDP-GLPGAPGP 181
Score = 37.7 bits (86), Expect = 0.057
Identities = 34/117 (29%), Positives = 44/117 (37%), Gaps = 17/117 (14%)
Query: 790 SPPPPAEAPKEPLQPEPAPPRPSGPATAED--PGRRPVLPQRPPEERPPQPPGSTGVIAE 847
+P P A L P PP P G PG + P P PG G E
Sbjct: 416 TPGSPGCAGSPGLPGSPGPPGPPGDIVFRKGPPGDHGL----PGYLGSPGIPGVDGPKGE 471
Query: 848 TGQA--------GPPAGAGVSGRGLPRGVDGQTGSGTV---PGAEGFAGAPGYPKSP 893
G GPP G+ G +G+ G+ G+ + PG+ G G PG+P P
Sbjct: 472 PGLLCTQCPYIPGPPGLPGLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFP 528
Score = 37.7 bits (86), Expect = 0.057
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Query: 836 PQPPGSTGVIAETGQAGPPAGAG-VSGRGLP-----RGVDGQTGSGTVPGAEGFAGAPGY 889
P PG G+ G AGPP G + G P RG+ G G+ +PG++G G G+
Sbjct: 975 PGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGF 1034
Query: 890 PKSPPVASPGAP 901
P PG P
Sbjct: 1035 PGR--AGRPGLP 1044
Score = 37.7 bits (86), Expect = 0.057
Identities = 38/110 (34%), Positives = 42/110 (38%), Gaps = 22/110 (20%)
Query: 809 PRPSGPATAEDPGRRPVLPQ--RPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGR---- 862
P P+GP PG R L P E PGS G + G G G GR
Sbjct: 987 PGPAGP-----PGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGFPGRAGRP 1041
Query: 863 GLP--RGVDGQTG-----SGTVPGAEGFAGAPGYP----KSPPVASPGAP 901
GLP G+ G G GT PG G G PG P K + PG P
Sbjct: 1042 GLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGPP 1091
Score = 37.0 bits (84), Expect = 0.098
Identities = 35/117 (29%), Positives = 42/117 (35%), Gaps = 20/117 (17%)
Query: 805 EPAPPRPSGPA--TAEDPGRRPVLPQ---------RPPEERPPQPPG-----STGVIAET 848
+P PP GP E P LP R + P PG +G ET
Sbjct: 796 QPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGET 855
Query: 849 GQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKS----PPVASPGAP 901
G G P G G RG G G PG +G G G+P + P +PG P
Sbjct: 856 GSPGIPGHQGEMGPLGQRGYPGNPGILGPPGEDGVIGMMGFPGAIGPPGPPGNPGTP 912
Score = 37.0 bits (84), Expect = 0.098
Identities = 34/107 (31%), Positives = 42/107 (39%), Gaps = 12/107 (11%)
Query: 806 PAPP-RPSGPATAEDPGRRPVLPQRPP--------EERPPQPPGSTGVIAETGQAGPPAG 856
P PP P P PG V QR ++ P P + VI + G+ G
Sbjct: 903 PGPPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGEPGLKGF 962
Query: 857 AGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP--PVASPGAP 901
AG G RGV G G + G G AG PG P+ +PG P
Sbjct: 963 AGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPG-PRGDLGSTGNPGEP 1008
Score = 35.8 bits (81), Expect = 0.22
Identities = 31/84 (36%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 820 PGR--RPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTV 877
PGR RP LP + PG +E + GPP G G G G+ G
Sbjct: 1035 PGRAGRPGLPGIHGLQGDKGEPG----YSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGP 1090
Query: 878 PGAEGFAGAPGYPKSPPVASPGAP 901
PG G AG G P SP SPG P
Sbjct: 1091 PGHLGPAGPEGAPGSP--GSPGLP 1112
Score = 33.1 bits (74), Expect = 1.4
Identities = 32/108 (29%), Positives = 38/108 (35%), Gaps = 12/108 (11%)
Query: 789 PSPP--------PPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPG 840
P PP PP + P P GP +PG + Q P PP PG
Sbjct: 435 PGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKG--EPGL--LCTQCPYIPGPPGLPG 490
Query: 841 STGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPG 888
G+ G G AG+ G G G G PGA+G G G
Sbjct: 491 LPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFPGAQGDPGLKG 538
Score = 30.4 bits (67), Expect = 9.2
Identities = 43/142 (30%), Positives = 48/142 (33%), Gaps = 14/142 (9%)
Query: 793 PPAEAPK-EP-LQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQ 850
P + PK EP L P P P PG V P + GS G TG
Sbjct: 463 PGVDGPKGEPGLLCTQCPYIPGPPGLPGLPGLHGV-KGIPGRQGAAGLKGSPGSPGNTGL 521
Query: 851 AGPPAGAGVSGRGLPRGVDGQT----GSGTVPGAEGFAGAP------GYPKSPPVASPGA 900
G P G G +G G+T G VPG G G P G P +P V
Sbjct: 522 PGFPGFPGAQGDPGLKGEKGETLQPEGQVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPG 581
Query: 901 PVPSLVSFSAGLTQKPFPSDGG 922
P L Q P P D G
Sbjct: 582 PKGELALSGEKGDQGP-PGDPG 602
>gi|89142730 alpha 3 type IV collagen isoform 1 precursor [Homo
sapiens]
Length = 1670
Score = 63.5 bits (153), Expect = 1e-09
Identities = 47/141 (33%), Positives = 56/141 (39%), Gaps = 21/141 (14%)
Query: 790 SPPPPAEA-PKEPLQ---PEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVI 845
+P PP EA P+ L P P PP P GP P P + PP PGS G
Sbjct: 635 APGPPGEAGPRGELSVSTPVPGPPGPPGP------------PGHPGPQGPPGIPGSLGKC 682
Query: 846 AETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVAS----PGAP 901
+ G GP G+ G G P G G G PG +G G PG P + PGA
Sbjct: 683 GDPGLPGPDGEPGIPGIGFP-GPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAK 741
Query: 902 VPSLVSFSAGLTQKPFPSDGG 922
V+ G FP + G
Sbjct: 742 GEPAVAMPGGPGTPGFPGERG 762
Score = 53.9 bits (128), Expect = 8e-07
Identities = 39/124 (31%), Positives = 50/124 (40%), Gaps = 12/124 (9%)
Query: 789 PSPPPPAEAP-------KEPLQPEPAPPR---PSGPATAEDPGRRPVLPQRPPEERPPQP 838
P PP P P K+ +P PP P+GP A P LP +P
Sbjct: 1064 PGPPGPTGDPGLPGDMGKKGEMGQPGPPGHLGPAGPEGAPGSPGSPGLPGKPGPHGDLGF 1123
Query: 839 PGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP--PVA 896
G G++ G GPP G G P G+ G G +PG G G G ++P P
Sbjct: 1124 KGIKGLLGPPGIRGPPGLPGFPGSPGPMGIRGDQGRDGIPGPAGEKGETGLLRAPPGPRG 1183
Query: 897 SPGA 900
+PGA
Sbjct: 1184 NPGA 1187
Score = 53.9 bits (128), Expect = 8e-07
Identities = 36/98 (36%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Query: 806 PAPPRPSGPATAE-DPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGL 864
P P P GP DPG ++ P PP PG G+ E G GPP G G
Sbjct: 1333 PGPIGPKGPPGVRGDPGTLKII-SLPGSPGPPGTPGEPGMQGEPGPPGPPGNLGPCG--- 1388
Query: 865 PRGVDGQTGSGTVPGAEGFAGAPGYPKSP-PVASPGAP 901
PRG G+ G PG G G G P P S G P
Sbjct: 1389 PRGKPGKDGKPGTPGPAGEKGNKGSKGEPGPAGSDGLP 1426
Score = 53.5 bits (127), Expect = 1e-06
Identities = 47/159 (29%), Positives = 62/159 (38%), Gaps = 22/159 (13%)
Query: 787 KAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRR--------------PVLPQRPPE 832
K P P + + EPA P GP T PG R P LP P
Sbjct: 725 KMGEPGLPGKPGLPGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTPGN 784
Query: 833 ERPPQPPGSTGVIAETGQAGPPAGAGVSG----RGLP--RGVDGQTGSGTVPGAEGFAGA 886
E P G G G+ GPP G + G +GLP G+ GQ G G +G G
Sbjct: 785 EGLDGPRGDPGQPGPPGEQGPP-GRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGDPGI 843
Query: 887 PGYPKSPPVASPGAP-VPSLVSFSAGLTQKPFPSDGGVV 924
PG +S G+P +P L Q+ +P + G++
Sbjct: 844 PGLDRSGFPGETGSPGIPGHQGEMGPLGQRGYPGNPGIL 882
Score = 51.2 bits (121), Expect = 5e-06
Identities = 34/95 (35%), Positives = 40/95 (42%), Gaps = 15/95 (15%)
Query: 806 PAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLP 865
P PP P G + P P +P P RP G G P G+ G
Sbjct: 359 PGPPGPRGARGPQGPSGPPGVPGSPGSSRP-------------GLRGAPGWPGLKGSKGE 405
Query: 866 RGVDGQTGSGTVPGAEGFAGAPGYPKSP-PVASPG 899
RG G+ GT PG+ G AG+PG P SP P PG
Sbjct: 406 RGRPGKDAMGT-PGSPGCAGSPGLPGSPGPPGPPG 439
Score = 49.7 bits (117), Expect = 1e-05
Identities = 36/115 (31%), Positives = 46/115 (40%), Gaps = 13/115 (11%)
Query: 806 PAPPRPSG-PATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGL 864
P PP P+G P D G++ + Q P PPG G G G P G+ G+
Sbjct: 1064 PGPPGPTGDPGLPGDMGKKGEMGQ-------PGPPGHLGPAGPEGAPGSPGSPGLPGKPG 1116
Query: 865 PRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVPSLVSFSAGLTQKPFPS 919
P G G G + G G G PG P PG+P P + G P P+
Sbjct: 1117 PHGDLGFKGIKGLLGPPGIRGPPGLP-----GFPGSPGPMGIRGDQGRDGIPGPA 1166
Score = 48.9 bits (115), Expect = 2e-05
Identities = 38/111 (34%), Positives = 42/111 (37%), Gaps = 6/111 (5%)
Query: 798 PKEPLQP-EPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAE----TGQAG 852
P +P P P P P+GP P P L P PPG G E T G
Sbjct: 598 PGDPGSPGSPGPAGPAGPP-GYGPQGEPGLQGTQGVPGAPGPPGEAGPRGELSVSTPVPG 656
Query: 853 PPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVP 903
PP G G P+G G GS G G G G P P + PG P P
Sbjct: 657 PPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGP 707
Score = 48.5 bits (114), Expect = 3e-05
Identities = 38/112 (33%), Positives = 44/112 (39%), Gaps = 23/112 (20%)
Query: 800 EPLQPEPAPPRPSGPATAEDPGRRPV--LPQRPPEERPPQPPGSTGVIAETGQAGPPAGA 857
E LQPE P P PGR+ + +P P + P P G + E G GPP
Sbjct: 542 ETLQPEGQVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPP--- 598
Query: 858 GVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGY-PKSPP-----VASPGAPVP 903
G GS PG G AG PGY P+ P PGAP P
Sbjct: 599 ------------GDPGSPGSPGPAGPAGPPGYGPQGEPGLQGTQGVPGAPGP 638
Score = 48.1 bits (113), Expect = 4e-05
Identities = 33/105 (31%), Positives = 38/105 (36%), Gaps = 10/105 (9%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTG 843
P P PP L+ P P P T +PG + E PP PPG+ G
Sbjct: 1333 PGPIGPKGPPGVRGDPGTLKIISLPGSPGPPGTPGEPGMQG-------EPGPPGPPGNLG 1385
Query: 844 VIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPG 888
G+ G G G P G G GS PG G G PG
Sbjct: 1386 PCGPRGKPGKDGKPGTPG---PAGEKGNKGSKGEPGPAGSDGLPG 1427
Score = 46.6 bits (109), Expect = 1e-04
Identities = 41/133 (30%), Positives = 48/133 (36%), Gaps = 31/133 (23%)
Query: 793 PPAEAPKEPLQPEPAPPRPSG----------PATAEDPGRRPVLPQRPPEERPPQPPGST 842
PP L P P P G P A + G +L PP P G+
Sbjct: 1132 PPGIRGPPGLPGFPGSPGPMGIRGDQGRDGIPGPAGEKGETGLL------RAPPGPRGNP 1185
Query: 843 GVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP----------KS 892
G G G P G+ GR +G G G G EGF G PG P +
Sbjct: 1186 GAQGAKGDRGAPGFPGLPGR---KGAMGDAGPRGPTGIEGFPGPPGLPGAIIPGQTGNRG 1242
Query: 893 PPVA--SPGAPVP 903
PP + SPGAP P
Sbjct: 1243 PPGSRGSPGAPGP 1255
Score = 46.2 bits (108), Expect = 2e-04
Identities = 44/136 (32%), Positives = 51/136 (37%), Gaps = 23/136 (16%)
Query: 789 PSPPPPAEAPKEPLQPEPAPPRPSG----PATAED---PGR--RPVLPQRP--------P 831
P P P P P P PP P G P T PG+ P LP +P P
Sbjct: 685 PGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEP 744
Query: 832 EERPPQPPGSTGVIAETGQAGPPAGAGVSGR-GLP-----RGVDGQTGSGTVPGAEGFAG 885
P PG+ G E G +G G+ G GLP G+DG G PG G G
Sbjct: 745 AVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTPGNEGLDGPRGDPGQPGPPGEQG 804
Query: 886 APGYPKSPPVASPGAP 901
PG P + G P
Sbjct: 805 PPGRCIEGPRGAQGLP 820
Score = 46.2 bits (108), Expect = 2e-04
Identities = 30/73 (41%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 830 PPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGY 889
P E P PG G + GQ G P G+ G P G DG G PGA G G PG
Sbjct: 852 PGETGSPGIPGHQGEMGPLGQRGYPGNPGILG---PPGEDGVIGMMGFPGAIGPPGPPGN 908
Query: 890 PKSP-PVASPGAP 901
P +P SPG P
Sbjct: 909 PGTPGQRGSPGIP 921
Score = 45.8 bits (107), Expect = 2e-04
Identities = 27/64 (42%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 836 PQPPGSTGVIAETGQAGPPAGAGVSG-RGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPP 894
P PPGS G TG G P G G GLP G+ G G + G GF+G+PG P +P
Sbjct: 54 PGPPGSPGQKGFTGPEGLPGPQGPKGFPGLP-GLTGSKGVRGISGLPGFSGSPGLPGTPG 112
Query: 895 VASP 898
P
Sbjct: 113 NTGP 116
Score = 45.8 bits (107), Expect = 2e-04
Identities = 37/123 (30%), Positives = 46/123 (37%), Gaps = 9/123 (7%)
Query: 789 PSPPPPAEAPKEP-LQPEPAPPRPSGPATAEDPGRRPVLPQ-RPPEERPPQPPGSTGVIA 846
P P P P EP +Q EP PP P G P P+ +P ++ P PG G
Sbjct: 1357 PGSPGPPGTPGEPGMQGEPGPPGPPG-------NLGPCGPRGKPGKDGKPGTPGPAGEKG 1409
Query: 847 ETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVPSLV 906
G G P AG G +G G +GS GF + + P VP
Sbjct: 1410 NKGSKGEPGPAGSDGLPGLKGKRGDSGSPATWTTRGFVFTRHSQTTAIPSCPEGTVPLYS 1469
Query: 907 SFS 909
FS
Sbjct: 1470 GFS 1472
Score = 43.9 bits (102), Expect = 8e-04
Identities = 45/137 (32%), Positives = 52/137 (37%), Gaps = 23/137 (16%)
Query: 785 SAKAPSPPPPAEAPKEPLQPE------PAPPRPSGPATAED---PGR--RPVLPQRPPEE 833
S AP PP P + ++ + P P P P TA D PGR P P P
Sbjct: 1249 SPGAPGPPGPPGSHVIGIKGDKGSMGHPGPKGP--PGTAGDMGPPGRLGAPGTPGLPGPR 1306
Query: 834 RPPQPPGSTGVIAE------TGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAP 887
P G GV E G GPP G G P GV G G+ + G G P
Sbjct: 1307 GDPGFQGFPGVKGEKGNPGFLGSIGPPGPIGPKG---PPGVRGDPGTLKIISLPGSPGPP 1363
Query: 888 GYPKSPPV-ASPGAPVP 903
G P P + PG P P
Sbjct: 1364 GTPGEPGMQGEPGPPGP 1380
Score = 43.9 bits (102), Expect = 8e-04
Identities = 41/135 (30%), Positives = 44/135 (32%), Gaps = 6/135 (4%)
Query: 767 SHVFQISTDLQDLVKFQPSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVL 826
SHV I D K P PP P AP P P DPG +
Sbjct: 1261 SHVIGIKGD-----KGSMGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPGPRGDPGFQG-F 1314
Query: 827 PQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGA 886
P E+ P GS G G GPP G G + G G PG G G
Sbjct: 1315 PGVKGEKGNPGFLGSIGPPGPIGPKGPPGVRGDPGTLKIISLPGSPGPPGTPGEPGMQGE 1374
Query: 887 PGYPKSPPVASPGAP 901
PG P P P P
Sbjct: 1375 PGPPGPPGNLGPCGP 1389
Score = 41.2 bits (95), Expect = 0.005
Identities = 36/126 (28%), Positives = 46/126 (36%), Gaps = 29/126 (23%)
Query: 824 PVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTV-----P 878
P LP P + P PPG G + G GPP G G PRG G G +
Sbjct: 173 PGLPGAPGPQGLPGPPGFPGPV---GPPGPPGFFGFPGAMGPRGPKGHMGERVIGHKGER 229
Query: 879 GAEGFAGAPGYPKSPPV---------------------ASPGAPVPSLVSFSAGLTQKPF 917
G +G G PG P + V PG P PS + + ++K
Sbjct: 230 GVKGLTGPPGPPGTVIVTLTGPDNRTDLKGEKGDKGAMGEPGPPGPSGLPGESYGSEKGA 289
Query: 918 PSDGGV 923
P D G+
Sbjct: 290 PGDPGL 295
Score = 41.2 bits (95), Expect = 0.005
Identities = 37/108 (34%), Positives = 43/108 (39%), Gaps = 22/108 (20%)
Query: 811 PSGPATAEDPGRRPVLPQR--PPEERPPQPPGSTGVIAETGQAGPPAGAGVSG-RGLP-- 865
P P PG V+ P PP PPG+ G GQ G P GV G RG P
Sbjct: 876 PGNPGILGPPGEDGVIGMMGFPGAIGPPGPPGNPGT---PGQRGSPGIPGVKGQRGTPGA 932
Query: 866 ---RGVDGQTGSGTV---------PGAEGFAGAPGYPKSPPVASPGAP 901
+G G G + PG +GFAG PG + V PG P
Sbjct: 933 KGEQGDKGNPGPSEISHVIGDKGEPGLKGFAGNPGEKGNRGV--PGMP 978
Score = 41.2 bits (95), Expect = 0.005
Identities = 34/95 (35%), Positives = 39/95 (41%), Gaps = 5/95 (5%)
Query: 811 PSGPATAEDPGRRPVLPQR--PPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGV 868
P GP E P LP P + PPGS G G GPP G+ V G +G
Sbjct: 1214 PRGPTGIEGFPGPPGLPGAIIPGQTGNRGPPGSRGSPGAPGPPGPP-GSHVIGIKGDKGS 1272
Query: 869 DGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVP 903
G G PG G G PG +P +PG P P
Sbjct: 1273 MGHPGPKGPPGTAGDMGPPGRLGAP--GTPGLPGP 1305
Score = 40.8 bits (94), Expect = 0.007
Identities = 26/82 (31%), Positives = 32/82 (39%), Gaps = 12/82 (14%)
Query: 835 PPQPPGSTGVIAETGQAGPPAGAGVSG----RGLP--------RGVDGQTGSGTVPGAEG 882
P PPG G + TG G P G+ G G+P G G+ G +PG G
Sbjct: 989 PAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGFPGRAGRPGLPGIHG 1048
Query: 883 FAGAPGYPKSPPVASPGAPVPS 904
G G P PG P P+
Sbjct: 1049 LQGDKGEPGYSEGTRPGPPGPT 1070
Score = 40.4 bits (93), Expect = 0.009
Identities = 34/109 (31%), Positives = 40/109 (36%), Gaps = 23/109 (21%)
Query: 805 EPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGL 864
EP PP PSG PG E+ P PG G + G G P GV G
Sbjct: 269 EPGPPGPSGL-----PGE-----SYGSEKGAPGDPGLQGKPGKDGVPGFPGSEGVKGN-- 316
Query: 865 PRGVDGQTGSGTVPGAEGFAGAPG----------YPKSPPVASPGAPVP 903
RG G G + G +G G PG Y + +PG P P
Sbjct: 317 -RGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYDTYQEKGDEGTPGPPGP 364
Score = 40.0 bits (92), Expect = 0.012
Identities = 33/97 (34%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 807 APPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPR 866
APP P G +PG + R P PG G G AGP G+ G P
Sbjct: 1177 APPGPRG-----NPGAQGAKGDRGA----PGFPGLPGRKGAMGDAGPRGPTGIEGFPGPP 1227
Query: 867 GVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVP 903
G+ G +PG G G PG SP +PG P P
Sbjct: 1228 GLPG----AIIPGQTGNRGPPGSRGSP--GAPGPPGP 1258
Score = 39.7 bits (91), Expect = 0.015
Identities = 44/143 (30%), Positives = 52/143 (36%), Gaps = 20/143 (13%)
Query: 778 DLVKFQPSAKAPSPPPPAEAPKEPLQPE--PAPPRPSG----PATAEDPGRRPVLPQRPP 831
D K + K PP + K PE P P P G P G R + P
Sbjct: 42 DGAKGEKGEKGFPGPPGSPGQKGFTGPEGLPGPQGPKGFPGLPGLTGSKGVRGI-SGLPG 100
Query: 832 EERPPQPPGSTGVIAETGQAGPPAGAGVSG-RGLPRGVDGQTGSGTVPGAEGFAGAPGYP 890
P PG+ G G G P +G G +G P G+ G G +PGA G G G P
Sbjct: 101 FSGSPGLPGTPGNTGPYGLVGVPGCSGSKGEQGFP-GLPGTLGYPGIPGAAGLKGQKGAP 159
Query: 891 ----------KSPPVASPGAPVP 903
K P PGAP P
Sbjct: 160 AKEEDIELDAKGDP-GLPGAPGP 181
Score = 37.7 bits (86), Expect = 0.057
Identities = 34/117 (29%), Positives = 44/117 (37%), Gaps = 17/117 (14%)
Query: 790 SPPPPAEAPKEPLQPEPAPPRPSGPATAED--PGRRPVLPQRPPEERPPQPPGSTGVIAE 847
+P P A L P PP P G PG + P P PG G E
Sbjct: 416 TPGSPGCAGSPGLPGSPGPPGPPGDIVFRKGPPGDHGL----PGYLGSPGIPGVDGPKGE 471
Query: 848 TGQA--------GPPAGAGVSGRGLPRGVDGQTGSGTV---PGAEGFAGAPGYPKSP 893
G GPP G+ G +G+ G+ G+ + PG+ G G PG+P P
Sbjct: 472 PGLLCTQCPYIPGPPGLPGLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFP 528
Score = 37.7 bits (86), Expect = 0.057
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Query: 836 PQPPGSTGVIAETGQAGPPAGAG-VSGRGLP-----RGVDGQTGSGTVPGAEGFAGAPGY 889
P PG G+ G AGPP G + G P RG+ G G+ +PG++G G G+
Sbjct: 975 PGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGF 1034
Query: 890 PKSPPVASPGAP 901
P PG P
Sbjct: 1035 PGR--AGRPGLP 1044
Score = 37.7 bits (86), Expect = 0.057
Identities = 38/110 (34%), Positives = 42/110 (38%), Gaps = 22/110 (20%)
Query: 809 PRPSGPATAEDPGRRPVLPQ--RPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGR---- 862
P P+GP PG R L P E PGS G + G G G GR
Sbjct: 987 PGPAGP-----PGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGFPGRAGRP 1041
Query: 863 GLP--RGVDGQTG-----SGTVPGAEGFAGAPGYP----KSPPVASPGAP 901
GLP G+ G G GT PG G G PG P K + PG P
Sbjct: 1042 GLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGPP 1091
Score = 37.0 bits (84), Expect = 0.098
Identities = 35/117 (29%), Positives = 42/117 (35%), Gaps = 20/117 (17%)
Query: 805 EPAPPRPSGPA--TAEDPGRRPVLPQ---------RPPEERPPQPPG-----STGVIAET 848
+P PP GP E P LP R + P PG +G ET
Sbjct: 796 QPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGET 855
Query: 849 GQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKS----PPVASPGAP 901
G G P G G RG G G PG +G G G+P + P +PG P
Sbjct: 856 GSPGIPGHQGEMGPLGQRGYPGNPGILGPPGEDGVIGMMGFPGAIGPPGPPGNPGTP 912
Score = 37.0 bits (84), Expect = 0.098
Identities = 34/107 (31%), Positives = 42/107 (39%), Gaps = 12/107 (11%)
Query: 806 PAPP-RPSGPATAEDPGRRPVLPQRPP--------EERPPQPPGSTGVIAETGQAGPPAG 856
P PP P P PG V QR ++ P P + VI + G+ G
Sbjct: 903 PGPPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGEPGLKGF 962
Query: 857 AGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP--PVASPGAP 901
AG G RGV G G + G G AG PG P+ +PG P
Sbjct: 963 AGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPG-PRGDLGSTGNPGEP 1008
Score = 35.8 bits (81), Expect = 0.22
Identities = 31/84 (36%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 820 PGR--RPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTV 877
PGR RP LP + PG +E + GPP G G G G+ G
Sbjct: 1035 PGRAGRPGLPGIHGLQGDKGEPG----YSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGP 1090
Query: 878 PGAEGFAGAPGYPKSPPVASPGAP 901
PG G AG G P SP SPG P
Sbjct: 1091 PGHLGPAGPEGAPGSP--GSPGLP 1112
Score = 33.1 bits (74), Expect = 1.4
Identities = 32/108 (29%), Positives = 38/108 (35%), Gaps = 12/108 (11%)
Query: 789 PSPP--------PPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPG 840
P PP PP + P P GP +PG + Q P PP PG
Sbjct: 435 PGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKG--EPGL--LCTQCPYIPGPPGLPG 490
Query: 841 STGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPG 888
G+ G G AG+ G G G G PGA+G G G
Sbjct: 491 LPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFPGAQGDPGLKG 538
Score = 30.4 bits (67), Expect = 9.2
Identities = 43/142 (30%), Positives = 48/142 (33%), Gaps = 14/142 (9%)
Query: 793 PPAEAPK-EP-LQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQ 850
P + PK EP L P P P PG V P + GS G TG
Sbjct: 463 PGVDGPKGEPGLLCTQCPYIPGPPGLPGLPGLHGV-KGIPGRQGAAGLKGSPGSPGNTGL 521
Query: 851 AGPPAGAGVSGRGLPRGVDGQT----GSGTVPGAEGFAGAP------GYPKSPPVASPGA 900
G P G G +G G+T G VPG G G P G P +P V
Sbjct: 522 PGFPGFPGAQGDPGLKGEKGETLQPEGQVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPG 581
Query: 901 PVPSLVSFSAGLTQKPFPSDGG 922
P L Q P P D G
Sbjct: 582 PKGELALSGEKGDQGP-PGDPG 602
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 63.2 bits (152), Expect = 1e-09
Identities = 42/114 (36%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Query: 789 PSPPPPAEAP-KEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAE 847
P P PA A + PP P+GPA P P E P P GS G
Sbjct: 313 PGAPGPAGARGNDGATGAAGPPGPTGPA---GPPGFPGAVGAKGEAGPQGPRGSEGPQGV 369
Query: 848 TGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP 901
G+ GPP AG +G G DGQ G+ GA G AGAPG+P + + P P
Sbjct: 370 RGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGP 423
Score = 62.4 bits (150), Expect = 2e-09
Identities = 45/128 (35%), Positives = 50/128 (39%), Gaps = 9/128 (7%)
Query: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTG 843
P A PP P P PP P+G + P RP E PP PPG G
Sbjct: 877 PGAAGRVGPPGPSGNAGP----PGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAG 932
Query: 844 VIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVP 903
E G G AG G P+G+ GQ G +PG G G PG P P PG P
Sbjct: 933 ---EKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLP--GPSGEPGKQGP 987
Query: 904 SLVSFSAG 911
S S G
Sbjct: 988 SGASGERG 995
Score = 57.4 bits (137), Expect = 7e-08
Identities = 48/135 (35%), Positives = 55/135 (40%), Gaps = 10/135 (7%)
Query: 788 APSPP----PPAEAPKEPLQPEPAPPR-PSGPATAEDPGRRPVLPQRPPEERPPQPPGST 842
AP P PP E P EP P PR P GP P RP E PP P G+
Sbjct: 195 APGPQGFQGPPGE-PGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGAR 253
Query: 843 GVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGY--PKSPP--VASP 898
G+ G G G SG +G G G PG+ G GAPG P+ P P
Sbjct: 254 GLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRP 313
Query: 899 GAPVPSLVSFSAGLT 913
GAP P+ + G T
Sbjct: 314 GAPGPAGARGNDGAT 328
Score = 56.6 bits (135), Expect = 1e-07
Identities = 41/116 (35%), Positives = 48/116 (41%), Gaps = 17/116 (14%)
Query: 796 EAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIA--------- 846
E PK P P P+GP + +P LP P PP PPG G A
Sbjct: 111 EGPKGDTGPR-GPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDE 169
Query: 847 -ETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP 901
TG P G SG PRG+ G G+ PG +GF G PG P P + P P
Sbjct: 170 KSTGGISVPGPMGPSG---PRGLPGPPGA---PGPQGFQGPPGEPGEPGASGPMGP 219
Score = 56.6 bits (135), Expect = 1e-07
Identities = 50/134 (37%), Positives = 58/134 (43%), Gaps = 17/134 (12%)
Query: 793 PPAEAPKEPLQ-PEPAPPRPSGPATAEDPGRR-----PVLPQRPPEERPPQPPGSTGVIA 846
PP E+ +E E +P R P D G P P P P P G +G
Sbjct: 1008 PPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRG 1067
Query: 847 ETGQAGP-----PAGA-GVSGRGLPRGVDGQT---GSGTVPGAEGFAGAPGYPKSPPVAS 897
ETG AGP P GA G +G PRG G+T G + G GF+G G P PP S
Sbjct: 1068 ETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQG-PPGPP-GS 1125
Query: 898 PGAPVPSLVSFSAG 911
PG PS S AG
Sbjct: 1126 PGEQGPSGASGPAG 1139
Score = 54.3 bits (129), Expect = 6e-07
Identities = 45/139 (32%), Positives = 54/139 (38%), Gaps = 23/139 (16%)
Query: 789 PSPPPPAE------------APKEP----LQPEPAPPRPSGPATAEDPGRRPVLPQRPPE 832
P PP PA A EP + + PP P+GPA P P
Sbjct: 805 PGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGA 864
Query: 833 ERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGY--P 890
PPG+TG G+ GPP +G +G P G G+ G G G AG PG P
Sbjct: 865 RGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGP 924
Query: 891 KSPP-----VASPGAPVPS 904
PP SPGA P+
Sbjct: 925 PGPPGPAGEKGSPGADGPA 943
Score = 53.9 bits (128), Expect = 8e-07
Identities = 34/106 (32%), Positives = 42/106 (39%), Gaps = 2/106 (1%)
Query: 798 PKEPLQPE--PAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPA 855
P P P P PP GP + P P P P PPG G + G+AG P
Sbjct: 180 PMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPG 239
Query: 856 GAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAP 901
G G P+G G G+ +PG +G G G + A P P
Sbjct: 240 RPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGP 285
Score = 53.5 bits (127), Expect = 1e-06
Identities = 51/158 (32%), Positives = 57/158 (36%), Gaps = 25/158 (15%)
Query: 784 PSAKAPS-------PPPPAEAPKEPLQP----------EPAPPRPSGP-ATAEDPGRRPV 825
P A+ PS PP P EP P EP P GP A + G+R
Sbjct: 412 PGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGA 471
Query: 826 LPQRPPEERPPQP-----PGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGA 880
+ P P P PGS G G AGP AG G P G G G PG
Sbjct: 472 RGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGE 531
Query: 881 EGFAGAPGYPKSPPVASPGAPVPSLVSFSAGLTQKPFP 918
G GA G SP SPG + AG +P P
Sbjct: 532 AGLPGAKGLTGSP--GSPGPDGKTGPPGPAGQDGRPGP 567
Score = 52.8 bits (125), Expect = 2e-06
Identities = 44/138 (31%), Positives = 57/138 (41%), Gaps = 12/138 (8%)
Query: 793 PPAEAPKEPLQPEPAPPRPSGPATAED-PGRRPVL--PQRPPEERPPQPPGSTGVIAETG 849
PP A ++ P PP G A PG + P + E P PPG+ G + G
Sbjct: 555 PPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDG 614
Query: 850 QA---GPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASP-GAPVPSL 905
+A GPP AG +G +G G G +PG G G G P V GAP P
Sbjct: 615 EAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGP-- 672
Query: 906 VSFSAGLTQKPFPSDGGV 923
S ++ FP + GV
Sbjct: 673 ---SGARGERGFPGERGV 687
Score = 52.0 bits (123), Expect = 3e-06
Identities = 43/130 (33%), Positives = 51/130 (39%), Gaps = 3/130 (2%)
Query: 793 PPAEAPKEPLQP--EPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQ 850
P A+ P P E P P+GP + RP P + PGS G +TG
Sbjct: 496 PGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGP 555
Query: 851 AGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPV-ASPGAPVPSLVSFS 909
GP G G P G GQ G PG +G AG PG V PGA P+
Sbjct: 556 PGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGE 615
Query: 910 AGLTQKPFPS 919
AG P P+
Sbjct: 616 AGAQGPPGPA 625
Score = 52.0 bits (123), Expect = 3e-06
Identities = 43/119 (36%), Positives = 48/119 (40%), Gaps = 15/119 (12%)
Query: 786 AKAPSPPPPAEAPKEPLQPEPAP-------PRPSGP-ATAEDPGRRPVLPQRPPEERPPQ 837
A A PP PA E + PA P P+GP A PG + V P + P
Sbjct: 616 AGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGV----PGDLGAPG 671
Query: 838 PPGSTG---VIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP 893
P G+ G E G GPP AG G G DG G PGA G GAPG P
Sbjct: 672 PSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMP 730
Score = 51.6 bits (122), Expect = 4e-06
Identities = 43/121 (35%), Positives = 55/121 (45%), Gaps = 18/121 (14%)
Query: 799 KEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAG 858
K+ ++ P P GPA A PG + P P G+ G + G+ GPP AG
Sbjct: 759 KDGVRGLTGPIGPPGPAGA--PGDKG----ESGPSGPAGPTGARGAPGDRGEPGPPGPAG 812
Query: 859 VSGRGLPRGVDGQTGSGTVP---GAEGFAGAPGYPKSP-----PVASPGAPVPSLVSFSA 910
+G P G DGQ G+ P GA+G AG PG P P P+ + GAP SA
Sbjct: 813 FAG---PPGADGQPGAKGEPGDAGAKGDAGPPG-PAGPAGPPGPIGNVGAPGAKGARGSA 868
Query: 911 G 911
G
Sbjct: 869 G 869
Score = 51.2 bits (121), Expect = 5e-06
Identities = 42/129 (32%), Positives = 49/129 (37%), Gaps = 21/129 (16%)
Query: 789 PSPP----PPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQP---PGS 841
P PP P + + Q P P P+G + P P P PP PG
Sbjct: 601 PGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGE 660
Query: 842 TGVIAETGQAGP---------PAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKS 892
GV + G GP P GV G P G G G+ GA+G AGAPG P
Sbjct: 661 QGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAP-- 718
Query: 893 PPVASPGAP 901
S GAP
Sbjct: 719 ---GSQGAP 724
Score = 51.2 bits (121), Expect = 5e-06
Identities = 45/133 (33%), Positives = 52/133 (39%), Gaps = 29/133 (21%)
Query: 789 PSPPPPAEAPKEPLQPEPA----PPRPSGPATAED----PGRR-----PVLPQRPPEERP 835
P PP PA P PA P P G A PG+R P LP P
Sbjct: 925 PGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPG------P 978
Query: 836 PQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP----- 890
PG G +G+ GPP G G P G G+ G+ PGAEG G G P
Sbjct: 979 SGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGA---PGAEGSPGRDGSPGAKGD 1035
Query: 891 --KSPPVASPGAP 901
++ P PGAP
Sbjct: 1036 RGETGPAGPPGAP 1048
Score = 50.8 bits (120), Expect = 7e-06
Identities = 44/149 (29%), Positives = 53/149 (35%), Gaps = 14/149 (9%)
Query: 785 SAKAPSPPPPAEAPKEP----LQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPG 840
+A P P PA P P + E P P G + P P P PG
Sbjct: 330 AAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPG 389
Query: 841 STGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP------- 893
+ G G G P AG G RG G G G PG +G +G PG P S
Sbjct: 390 ADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKG 449
Query: 894 ---PVASPGAPVPSLVSFSAGLTQKPFPS 919
PV G P P+ G +P P+
Sbjct: 450 EPGPVGVQGPPGPAGEEGKRGARGEPGPT 478
Score = 50.8 bits (120), Expect = 7e-06
Identities = 41/125 (32%), Positives = 49/125 (39%), Gaps = 16/125 (12%)
Query: 783 QPSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGST 842
QP AK + P + P P GP+ + PG P E P G T
Sbjct: 393 QPGAKGANGAPG-------IAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDT 445
Query: 843 GVIAETGQAG---PPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAP---GYPKSPPVA 896
G E G G PP AG G+ RG G TG +PG G G P G+P + VA
Sbjct: 446 GAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTG---LPGPPGERGGPGSRGFPGADGVA 502
Query: 897 SPGAP 901
P P
Sbjct: 503 GPKGP 507
Score = 48.5 bits (114), Expect = 3e-05
Identities = 43/133 (32%), Positives = 49/133 (36%), Gaps = 26/133 (19%)
Query: 791 PPPPAEAPKE--------PLQP-----------EPAPPRPSGPATAEDPGRRPVLPQRPP 831
PP PA AP + P P EP PP P+G A P +P
Sbjct: 771 PPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGP------PGADGQPG 824
Query: 832 EERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPK 891
+ P G+ G G AGP G G G G GS PGA GF GA G
Sbjct: 825 AKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVG 884
Query: 892 SP-PVASPGAPVP 903
P P + G P P
Sbjct: 885 PPGPSGNAGPPGP 897
Score = 48.5 bits (114), Expect = 3e-05
Identities = 48/166 (28%), Positives = 55/166 (33%), Gaps = 42/166 (25%)
Query: 791 PPPPAEAPKEPLQPEPAPPR----------PSGPATAEDP--GRRPVLPQRPPEER---- 834
P P AP P P P P P+GPA P R P PQ P ++
Sbjct: 1041 PAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETG 1100
Query: 835 ---------------------PPQPPGSTGVIAETGQA---GPPAGAGVSGRGLPRGVDG 870
PP PG G +G A GPP AG G+ G+ G
Sbjct: 1101 EQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPG 1160
Query: 871 QTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVPSLVSFSAGLTQKP 916
G G G AG G P PP PG P P F +P
Sbjct: 1161 PIGPPGPRGRTGDAGPVG-PPGPP-GPPGPPGPPSAGFDFSFLPQP 1204
Score = 48.1 bits (113), Expect = 4e-05
Identities = 29/83 (34%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Query: 806 PAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLP 865
P P PSGP P P P + PP PG G G GPP G +G
Sbjct: 178 PGPMGPSGPRGLPGP---PGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGE 234
Query: 866 RGVDGQTGSGTVPGAEGFAGAPG 888
G G+ G PG +G G PG
Sbjct: 235 AGKPGRPGERGPPGPQGARGLPG 257
Score = 47.0 bits (110), Expect = 9e-05
Identities = 40/120 (33%), Positives = 47/120 (39%), Gaps = 8/120 (6%)
Query: 804 PEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRG 863
P PA PR + A D + P + PG G+ E G AG P G G
Sbjct: 691 PGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGA--PGLQGMPGERGAAGLPGPKGDRGDA 748
Query: 864 LPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVPSLVSFSAGLT-QKPFPSDGG 922
P+G DG G V G G G PG P +PG S S AG T + P D G
Sbjct: 749 GPKGADGSPGKDGVRGLTGPIGPPG-----PAGAPGDKGESGPSGPAGPTGARGAPGDRG 803
Score = 45.1 bits (105), Expect = 4e-04
Identities = 32/89 (35%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Query: 806 PAPPRPSGPATAEDPGRRPVLPQRPPEERPPQ----PPGSTGVIAETGQAGPPAGAGVSG 861
P P PSG +PG++ P ER P PPG G E+G+ G P G G
Sbjct: 973 PGLPGPSG-----EPGKQG--PSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPG 1025
Query: 862 RGLPRGVDGQTGSGTVPGAEGFAGAPGYP 890
R G G G G G GAPG P
Sbjct: 1026 RDGSPGAKGDRGETGPAGPPGAPGAPGAP 1054
Score = 44.3 bits (103), Expect = 6e-04
Identities = 45/141 (31%), Positives = 53/141 (37%), Gaps = 21/141 (14%)
Query: 789 PSPP-PPAEAPKEPLQPEPAPPRPSGPATAED----PGRRPVLPQRPPEERPPQPPGSTG 843
P P PP EA K Q P GP+ A PG R V + PP P G G
Sbjct: 646 PGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGV-------QGPPGPAGPRG 698
Query: 844 VIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPK-----SPPVASP 898
G G AG G +G G G +PG G AG PG PK + P +
Sbjct: 699 ANGAPGNDGAKGDAGAPGAPGSQGAPGLQG---MPGERGAAGLPG-PKGDRGDAGPKGAD 754
Query: 899 GAPVPSLVSFSAGLTQKPFPS 919
G+P V G P P+
Sbjct: 755 GSPGKDGVRGLTGPIGPPGPA 775
Score = 42.0 bits (97), Expect = 0.003
Identities = 54/180 (30%), Positives = 63/180 (35%), Gaps = 47/180 (26%)
Query: 783 QPSAKAP----SPPPP-------AEAPKEPLQPEPAPPRPSG----PATAEDPGRR---- 823
+P A P PP P EA K E PP P G P TA PG +
Sbjct: 210 EPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRG 269
Query: 824 ------------PVLPQRPP----EERPPQPPGSTGVIAETGQAGPP--AGA----GVSG 861
P P+ P E P G G+ E G+ G P AGA G +G
Sbjct: 270 FSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATG 329
Query: 862 RGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSP-----PVASPGAPVPSLVSFSAGLTQKP 916
P G G G PGA G G G P+ P P G P P + +AG P
Sbjct: 330 AAGPPGPTGPAGPPGFPGAVGAKGEAG-PQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNP 388
Score = 42.0 bits (97), Expect = 0.003
Identities = 40/134 (29%), Positives = 48/134 (35%), Gaps = 27/134 (20%)
Query: 788 APSPPPPAEAPKEPLQP-------------EPAPPRPSGPATAEDPGRRPVLPQRPPEER 834
+P P P +P E +P P P P G P + RP
Sbjct: 513 SPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQD---GRPGPPG 569
Query: 835 PPQPPGSTGVIA---ETGQAGPPAGA------GVSGRGLPRGVDGQTGSGTVPGAEGFAG 885
PP G GV+ G AG P A G G P G DG+ G+ PG G AG
Sbjct: 570 PPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAG 629
Query: 886 APGYPKSPPVASPG 899
G + P SPG
Sbjct: 630 ERG--EQGPAGSPG 641
Score = 40.8 bits (94), Expect = 0.007
Identities = 29/69 (42%), Positives = 30/69 (43%), Gaps = 7/69 (10%)
Query: 839 PGSTGVIAETGQAGPPAGAGV---SGRGLPRGVDGQTGSGTVPGAEGFAGAPGYP--KSP 893
PG GV TG GPP AG G P G G TG+ PG G G PG P
Sbjct: 757 PGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGP 816
Query: 894 PVA--SPGA 900
P A PGA
Sbjct: 817 PGADGQPGA 825
Score = 40.0 bits (92), Expect = 0.012
Identities = 35/108 (32%), Positives = 40/108 (37%), Gaps = 17/108 (15%)
Query: 805 EPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGP--PAG------ 856
EP P +G P P RP P G+ G G GP PAG
Sbjct: 288 EPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPG 347
Query: 857 ----AGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGA 900
G +G PRG +G G PG G AGA G P +PGA
Sbjct: 348 AVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAG-----PAGNPGA 390
Score = 37.7 bits (86), Expect = 0.057
Identities = 33/97 (34%), Positives = 37/97 (38%), Gaps = 14/97 (14%)
Query: 827 PQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGA 886
P P P +TGV G GP RG PRG G G +PG G G
Sbjct: 93 PVCPDGSESPTDQETTGVEGPKGDTGP--------RG-PRGPAGPPGRDGIPGQPGLPGP 143
Query: 887 PGYPKSPPVASPGAPVPSLVSFSAGLTQKPFPSDGGV 923
PG P PP PG S G +K S GG+
Sbjct: 144 PG-PPGPP-GPPGLGGNFAPQLSYGYDEK---STGGI 175
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,280,921
Number of Sequences: 37866
Number of extensions: 2836278
Number of successful extensions: 48156
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 1714
Number of HSP's that attempted gapping in prelim test: 16484
Number of HSP's gapped (non-prelim): 14170
length of query: 1053
length of database: 18,247,518
effective HSP length: 113
effective length of query: 940
effective length of database: 13,968,660
effective search space: 13130540400
effective search space used: 13130540400
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.