Guide to the Human Genome
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Name: EMILIN3 Sequence: fasta or formatted (766aa) NCBI GI: 45433501
Description:

elastin microfibril interfacer 3

Referenced in:

Complement
Extracellular Matrix

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         71           2
 C cysteine            2.3         18           2
 D aspartate           3.8         29           2
 E glutamate           7.2         55           2
 F phenylalanine       0.9          7           1
 G glycine            10.3         79           2
 H histidine           2.3         18           1
 I isoleucine          1.2          9           1
 K lysine              2.5         19           1
 L leucine            14.4        110           2
 M methionine          0.8          6           1
 N asparagine          1.6         12           1
 P proline             5.7         44           2
 Q glutamine           7.2         55           2
 R arginine            8.7         67           3
 S serine              7.2         55           2
 T threonine           5.4         41           2
 V valine              6.7         51           2
 W tryptophan          1.0          8           1
 Y tyrosine            1.6         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   elastin microfibril interfacer 3 
EMILIN2               0.132   elastin microfibril interfacer 2 
EMILIN1               0.094   elastin microfibril interfacer 1 
EMID2                 0.043   EMI domain containing 2 
EMID1                 0.042   EMI domain containing 1 
MMRN2                 0.026   multimerin 2 precursor 
CROCC                 0.022   ciliary rootlet coiled-coil 
MMRN1                 0.020   multimerin 1 
MYH14                 0.019   myosin, heavy chain 14 isoform 1 
MYH14                 0.019   myosin, heavy chain 14 isoform 2 
MYH14                 0.019   myosin, heavy chain 14 isoform 3 
GCC2                  0.018   GRIP and coiled-coil domain-containing 2 
RRBP1                 0.018   ribosome binding protein 1 
RRBP1                 0.018   ribosome binding protein 1 
MYH7B                 0.018   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
MYH9                  0.017   myosin, heavy polypeptide 9, non-muscle 
CCDC88B               0.017   coiled-coil domain containing 88 
MYH3                  0.016   myosin, heavy chain 3, skeletal muscle, embryonic [H...
ANKRD24               0.015   ankyrin repeat domain 24 
FYCO1                 0.015   FYVE and coiled-coil domain containing 1 
CCDC64B               0.014   coiled-coil domain containing 64B 
MYH2                  0.013   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.013   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH11                 0.013   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.013   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.013   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.013   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
GOLGA3                0.013   Golgi autoantigen, golgin subfamily a, 3 
MYH13                 0.013   myosin, heavy polypeptide 13, skeletal muscle [Homo...
NUMA1                 0.013   nuclear mitotic apparatus protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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