Guide to the Human Genome
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Name: MMRN1 Sequence: fasta or formatted (1228aa) NCBI GI: 45269141
Description:

multimerin 1

Referenced in:

Complement

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         57           2
 C cysteine            1.7         21           2
 D aspartate           3.7         46           2
 E glutamate           7.1         87           2
 F phenylalanine       3.2         39           2
 G glycine             5.0         61           2
 H histidine           2.1         26           2
 I isoleucine          5.9         72           2
 K lysine              6.9         85           2
 L leucine            10.3        126           3
 M methionine          2.4         29           2
 N asparagine          6.6         81           2
 P proline             3.8         47           2
 Q glutamine           6.4         79           5
 R arginine            4.3         53           2
 S serine              8.7        107           4
 T threonine           8.0         98           2
 V valine              6.0         74           2
 W tryptophan          0.6          7           1
 Y tyrosine            2.7         33           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   multimerin 1 
CCDC88A               0.028   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.028   coiled-coil domain containing 88A isoform 1 
MMRN2                 0.025   multimerin 2 precursor 
EMILIN2               0.025   elastin microfibril interfacer 2 
EMILIN1               0.024   elastin microfibril interfacer 1 
EEA1                  0.022   early endosome antigen 1, 162kD 
GOLGB1                0.022   golgi autoantigen, golgin subfamily b, macrogolgin ...
MYH13                 0.021   myosin, heavy polypeptide 13, skeletal muscle [Homo...
RAI14                 0.020   retinoic acid induced 14 isoform d 
RAI14                 0.020   retinoic acid induced 14 isoform c 
RAI14                 0.020   retinoic acid induced 14 isoform b 
RAI14                 0.020   retinoic acid induced 14 isoform a 
RAI14                 0.020   retinoic acid induced 14 isoform a 
RAI14                 0.020   retinoic acid induced 14 isoform a 
CENPE                 0.019   centromere protein E 
EMID1                 0.017   EMI domain containing 1 
GOLGA4                0.017   golgi autoantigen, golgin subfamily a, 4 
CCDC18                0.016   sarcoma antigen NY-SAR-41 
NUMA1                 0.015   nuclear mitotic apparatus protein 1 
CENPF                 0.015   centromere protein F 
CCDC39                0.015   coiled-coil domain containing 39 
MYH1                  0.015   myosin, heavy chain 1, skeletal muscle, adult [Homo...
CAPRIN2               0.015   C1q domain containing 1 isoform 1 
CAPRIN2               0.015   C1q domain containing 1 isoform 3 
CAPRIN2               0.015   C1q domain containing 1 isoform 2 
TPR                   0.014   nuclear pore complex-associated protein TPR 
MYH11                 0.014   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.014   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.014   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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