| Name: VGLL3 | Sequence: fasta or formatted (326aa) | NCBI GI: 56550035 | |
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Description: colon carcinoma related protein
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Referenced in: Additional Genes in Development
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 8.3 27 2 C cysteine 1.5 5 1 D aspartate 4.3 14 1 E glutamate 5.8 19 7 F phenylalanine 3.1 10 1 G glycine 5.5 18 2 H histidine 8.0 26 7 I isoleucine 1.8 6 1 K lysine 3.1 10 2 L leucine 5.5 18 2 M methionine 3.1 10 1 N asparagine 1.2 4 1 P proline 12.6 41 3 Q glutamine 5.8 19 2 R arginine 2.5 8 1 S serine 10.7 35 2 T threonine 6.4 21 2 V valine 4.9 16 2 W tryptophan 1.8 6 1 Y tyrosine 4.0 13 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 colon carcinoma related protein VGLL2 0.190 vestigial-like 2 isoform 1 VGLL2 0.108 vestigial-like 2 isoform 2 VGLL1 0.059 vestigial like 1 FOXB2 0.043 forkhead box B2 CHD8 0.037 chromodomain helicase DNA binding protein 8 SHANK1 0.037 SH3 and multiple ankyrin repeat domains 1 CBX4 0.035 chromobox homolog 4 OTX1 0.035 orthodenticle homeobox 1 NKD2 0.035 naked cuticle homolog 2 DYRK1A 0.034 dual-specificity tyrosine-(Y)-phosphorylation regula... DYRK1A 0.034 dual-specificity tyrosine-(Y)-phosphorylation regula... RNF111 0.032 ring finger protein 111 ONECUT2 0.032 one cut domain, family member 2 ARID1B 0.032 AT rich interactive domain 1B (SWI1-like) isoform 2 ... ARID1B 0.032 AT rich interactive domain 1B (SWI1-like) isoform 1 ... ARID1B 0.032 AT rich interactive domain 1B (SWI1-like) isoform 3 ... FOXG1 0.031 forkhead box G1 HRG 0.031 histidine-rich glycoprotein precursor RBM33 0.028 RNA binding motif protein 33 SHROOM4 0.028 shroom family member 4 SIAH3 0.028 seven in absentia homolog 3 NUFIP2 0.028 nuclear fragile X mental retardation protein interac... YY1 0.027 YY1 transcription factor HRCT1 0.027 histidine rich carboxyl terminus 1 IQSEC1 0.027 IQ motif and Sec7 domain 1 isoform a POU4F2 0.027 Brn3b POU domain transcription factor MEOX2 0.025 mesenchyme homeobox 2 FUSSEL18 0.025 PREDICTED: functional smad suppressing element 18 [... FUSSEL18 0.025 PREDICTED: functional smad suppressing element 18 [...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
