CHD8 1414

Name: CHD8	Sequence: fasta or formatted (2302aa)		NCBI GI: 114326455
Description: chromodomain helicase DNA binding protein 8		Referenced in: Nonhistone Chromosomal Proteins PHD Finger Proteins Small RNAs in RNA Processing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 130 3 C cysteine 1.4 32 2 D aspartate 6.7 155 4 E glutamate 8.6 198 5 F phenylalanine 3.1 71 2 G glycine 5.3 122 2 H histidine 3.1 72 7 I isoleucine 4.3 100 2 K lysine 7.0 161 3 L leucine 9.4 216 4 M methionine 2.5 58 3 N asparagine 3.2 73 2 P proline 6.1 141 2 Q glutamine 5.3 121 2 R arginine 7.0 162 5 S serine 8.0 184 14 T threonine 4.6 105 3 V valine 5.3 122 2 W tryptophan 1.2 28 2 Y tyrosine 2.2 51 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chromodomain helicase DNA binding protein 8 CHD9 0.488 chromodomain helicase DNA binding protein 9 CHD7 0.456 chromodomain helicase DNA binding protein 7 CHD6 0.408 chromodomain helicase DNA binding protein 6 CHD2 0.109 chromodomain helicase DNA binding protein 2 isoform... CHD1 0.106 chromodomain helicase DNA binding protein 1 CHD3 0.106 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.106 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.106 chromodomain helicase DNA binding protein 3 isoform... CHD4 0.105 chromodomain helicase DNA binding protein 4 CHD5 0.102 chromodomain helicase DNA binding protein 5 SMARCA5 0.083 SWI/SNF-related matrix-associated actin-dependent re... SMARCA1 0.083 SWI/SNF-related matrix-associated actin-dependent r... SMARCA1 0.081 SWI/SNF-related matrix-associated actin-dependent re... SMARCA2 0.076 SWI/SNF-related matrix-associated actin-dependent re... SMARCA2 0.076 SWI/SNF-related matrix-associated actin-dependent re... CHD1L 0.074 chromodomain helicase DNA binding protein 1-like [H... SMARCA4 0.073 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.073 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.073 SWI/SNF-related matrix-associated actin-dependent re... SMARCA4 0.072 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.072 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.072 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.072 SWI/SNF-related matrix-associated actin-dependent r... HELLS 0.071 helicase, lymphoid-specific SMARCAD1 0.054 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.054 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.054 SWI/SNF-related, matrix-associated actin-dependent ... ERCC6 0.046 excision repair cross-complementing rodent repair def... RAD54B 0.043 RAD54 homolog B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.