Guide to the Human Genome
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Name: RBM33 Sequence: fasta or formatted (1170aa) NCBI GI: 151301053
Description:

RNA binding motif protein 33

Referenced in:

RNA-binding Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         59           3
 C cysteine            0.4          5           1
 D aspartate           3.8         44           3
 E glutamate           7.9         92           4
 F phenylalanine       2.7         32           2
 G glycine             6.4         75           4
 H histidine           4.1         48           7
 I isoleucine          2.7         32           2
 K lysine              4.1         48           2
 L leucine             7.7         90           2
 M methionine          2.1         24           3
 N asparagine          2.6         31           1
 P proline            15.6        183           8
 Q glutamine          10.7        125           5
 R arginine            6.4         75           3
 S serine              7.0         82           3
 T threonine           4.4         51           2
 V valine              5.1         60           2
 W tryptophan          0.3          3           1
 Y tyrosine            0.9         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RNA binding motif protein 33 
BRD4                  0.056   bromodomain-containing protein 4 isoform long 
FLJ22184              0.038   PREDICTED: hypothetical protein FLJ22184 
FMN2                  0.037   formin 2 
WNK2                  0.035   WNK lysine deficient protein kinase 2 
RAPH1                 0.035   Ras association and pleckstrin homology domains 1 is...
MLL2                  0.033   myeloid/lymphoid or mixed-lineage leukemia 2 
PRB2                  0.033   proline-rich protein BstNI subfamily 2 
RERE                  0.033   atrophin-1 like protein isoform b 
RERE                  0.033   atrophin-1 like protein isoform a 
RERE                  0.033   atrophin-1 like protein isoform a 
NACA                  0.032   nascent polypeptide-associated complex alpha subuni...
GLTSCR1               0.031   glioma tumor suppressor candidate region gene 1 [Ho...
SFRS15                0.030   splicing factor, arginine/serine-rich 15 isoform 3 ...
PCLO                  0.030   piccolo isoform 2 
PCLO                  0.030   piccolo isoform 1 
PTPN23                0.030   protein tyrosine phosphatase, non-receptor type 23 [...
PRB1                  0.030   proline-rich protein BstNI subfamily 1 isoform 1 pre...
PRG4                  0.030   proteoglycan 4 isoform D 
PRG4                  0.030   proteoglycan 4 isoform C 
PRG4                  0.030   proteoglycan 4 isoform B 
PRG4                  0.030   proteoglycan 4 isoform A 
WIPF1                 0.029   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.029   WAS/WASL interacting protein family, member 1 
SETD1B                0.029   SET domain containing 1B 
SFRS15                0.028   splicing factor, arginine/serine-rich 15 isoform 2 ...
SFRS15                0.028   splicing factor, arginine/serine-rich 15 isoform 1 [...
TTN                   0.028   titin isoform N2-A 
ATN1                  0.028   atrophin-1 
ATN1                  0.028   atrophin-1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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