Guide to the Human Genome
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Name: MEOX2 Sequence: fasta or formatted (304aa) NCBI GI: 84105335
Description:

mesenchyme homeobox 2

Referenced in:

Protein Composition and Structure
Homeobox and Related Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         25           3
 C cysteine            1.6          5           1
 D aspartate           3.3         10           1
 E glutamate           6.9         21           2
 F phenylalanine       2.0          6           1
 G glycine             7.6         23           2
 H histidine           9.5         29          13
 I isoleucine          2.0          6           2
 K lysine              4.6         14           2
 L leucine             8.2         25           2
 M methionine          1.6          5           1
 N asparagine          3.3         10           1
 P proline             5.9         18           2
 Q glutamine           6.6         20           4
 R arginine            5.9         18           2
 S serine             13.2         40           4
 T threonine           3.9         12           1
 V valine              2.6          8           1
 W tryptophan          1.0          3           1
 Y tyrosine            2.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mesenchyme homeobox 2 
MEOX1                 0.262   mesenchyme homeobox 1 isoform 1 
MEOX1                 0.218   mesenchyme homeobox 1 isoform 3 
HOXA9                 0.118   homeobox A9 
HOXB7                 0.110   homeobox B7 
GSX2                  0.110   GS homeobox 2 
HOXA3                 0.110   homeobox A3 isoform a 
HOXA3                 0.110   homeobox A3 isoform a 
HOXC4                 0.108   homeobox C4 
HOXC4                 0.108   homeobox C4 
NKX1-1                0.108   PREDICTED: NK1 homeobox 1 
BARHL2                0.108   BarH-like homeobox 2 
HOXA1                 0.108   homeobox A1 isoform a 
NKX1-1                0.105   PREDICTED: HPX-153 homeobox 
NKX1-1                0.103   PREDICTED: NK1 homeobox 1 
HOXC9                 0.102   homeobox C9 
HOXD4                 0.100   homeobox D4 
HOXA10                0.100   homeobox A10 isoform a 
HOXB4                 0.098   homeobox B4 
HOXA5                 0.097   homeobox A5 
HOXC5                 0.097   homeobox C5 
MNX1                  0.097   homeo box HB9 
HOXA4                 0.097   homeobox A4 
HOXB5                 0.093   homeobox B5 
HOXA11                0.093   homeobox A11 
HOXD3                 0.092   homeobox D3 
BARHL1                0.090   BarH-like homeobox 1 
HOXA3                 0.090   homeobox A3 isoform b 
PDX1                  0.090   pancreatic and duodenal homeobox 1 
HOXD9                 0.089   homeobox D9 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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