Guide to the Human Genome
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Name: FOXB2 Sequence: fasta or formatted (432aa) NCBI GI: 61966923
Description:

forkhead box B2

Referenced in:

FOX Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.8         64          11
 C cysteine            0.9          4           1
 D aspartate           2.1          9           1
 E glutamate           2.1          9           1
 F phenylalanine       3.0         13           1
 G glycine             7.2         31           2
 H histidine           9.3         40           7
 I isoleucine          2.3         10           2
 K lysine              3.5         15           1
 L leucine             6.2         27           2
 M methionine          2.3         10           1
 N asparagine          1.4          6           1
 P proline            15.0         65          10
 Q glutamine           5.8         25           2
 R arginine            3.2         14           3
 S serine              9.3         40           2
 T threonine           2.5         11           1
 V valine              5.8         25           2
 W tryptophan          0.7          3           1
 Y tyrosine            2.5         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   forkhead box B2 
FOXB1                 0.233   forkhead box B1 
FOXA2                 0.177   forkhead box A2 isoform 2 
FOXA2                 0.177   forkhead box A2 isoform 1 
FOXD1                 0.177   forkhead box D1 
FOXA1                 0.173   forkhead box A1 
FOXD3                 0.166   forkhead box D3 
FOXD2                 0.163   forkhead box D2 
FOXA3                 0.162   forkhead box A3 
FOXE1                 0.158   forkhead box E1 
FOXC1                 0.150   forkhead box C1 
FOXL2                 0.145   forkhead box L2 
FOXD4L6               0.145   forkhead box D4-like 6 
FOXD4L5               0.143   forkhead box D4-like 5 
FOXC2                 0.142   forkhead box C2 
FOXD4L3               0.142   forkhead box D4-like 3 
FOXD4L2               0.141   forkhead box D4-like 2 
FOXD4L4               0.141   forkhead box D4-like 4 
FOXD4L1               0.141   forkhead box D4-like 1 
FOXD4                 0.141   forkhead box D4 
FOXL1                 0.141   forkhead box L1 
FOXE3                 0.140   forkhead box E3 
FOXS1                 0.135   forkhead box S1 
FOXF2                 0.122   forkhead box F2 
FOXI3                 0.122   forkhead box I3 
FOXI1                 0.117   forkhead box I1 isoform a 
FOXI2                 0.113   forkhead box I2 
FOXG1                 0.111   forkhead box G1 
FOXF1                 0.109   forkhead box F1 
LOC651986             0.107   PREDICTED: similar to forkhead box L2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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