Guide to the Human Genome
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Name: VGLL2 Sequence: fasta or formatted (143aa) NCBI GI: 23592242
Description:

vestigial-like 2 isoform 2

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [317aa] vestigial-like 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         12           3
 C cysteine            3.5          5           1
 D aspartate           2.1          3           1
 E glutamate           7.0         10           3
 F phenylalanine       3.5          5           1
 G glycine             4.9          7           1
 H histidine           1.4          2           1
 I isoleucine          2.1          3           1
 K lysine              3.5          5           1
 L leucine             4.9          7           2
 M methionine          2.1          3           1
 N asparagine          1.4          2           1
 P proline             9.1         13           2
 Q glutamine           5.6          8           1
 R arginine            4.9          7           2
 S serine             21.0         30           3
 T threonine           2.8          4           1
 V valine              3.5          5           2
 W tryptophan          0.7          1           1
 Y tyrosine            7.7         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   vestigial-like 2 isoform 2 
VGLL2                 0.907   vestigial-like 2 isoform 1 
VGLL3                 0.270   colon carcinoma related protein 
VGLL1                 0.148   vestigial like 1 
TNRC18                0.037   trinucleotide repeat containing 18 
EDC4                  0.033   autoantigen RCD8 
SREBF2                0.030   sterol regulatory element-binding transcription fact...
SRRM2                 0.026   splicing coactivator subunit SRm300 
LOC731605             0.026   PREDICTED: similar to BCL2-associated transcription...
BCLAF1                0.026   BCL2-associated transcription factor 1 isoform 3 [H...
BCLAF1                0.026   BCL2-associated transcription factor 1 isoform 2 [H...
BCLAF1                0.026   BCL2-associated transcription factor 1 isoform 1 [Hom...
THRAP3                0.022   thyroid hormone receptor associated protein 3 [Homo...
SETD1A                0.019   SET domain containing 1A 
ZMYND8                0.019   zinc finger, MYND-type containing 8 isoform c 
ZMYND8                0.019   zinc finger, MYND-type containing 8 isoform a 
ZMYND8                0.019   zinc finger, MYND-type containing 8 isoform b 
FAM102A               0.019   early estrogen-induced gene 1 protein isoform a [Hom...
FAM102A               0.019   early estrogen-induced gene 1 protein isoform b [Hom...
TMEM40                0.019   transmembrane protein 40 
PPRC1                 0.019   peroxisome proliferator-activated receptor gamma, co...
AFF4                  0.019   ALL1 fused gene from 5q31 
TAOK2                 0.019   TAO kinase 2 isoform 1 
TAOK2                 0.019   TAO kinase 2 isoform 2 
SETD1B                0.019   SET domain containing 1B 
KIAA1853              0.019   KIAA1853 protein 
CNTLN                 0.019   centlein isoform 1 
ZNF280D               0.019   suppressor of hairy wing homolog 4 isoform 2 
CHD9                  0.019   chromodomain helicase DNA binding protein 9 
ZNF280D               0.019   suppressor of hairy wing homolog 4 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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