SHROOM4 2192

Name: SHROOM4	Sequence: fasta or formatted (1493aa)		NCBI GI: 118600967
Description: shroom family member 4		Referenced in: PDZ Domain
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 102 3 C cysteine 2.7 40 2 D aspartate 3.5 52 2 E glutamate 9.3 139 20 F phenylalanine 2.5 38 2 G glycine 6.8 101 2 H histidine 3.8 57 3 I isoleucine 2.3 35 2 K lysine 5.4 80 2 L leucine 9.0 135 3 M methionine 1.6 24 2 N asparagine 3.4 51 1 P proline 8.0 120 4 Q glutamine 6.7 100 6 R arginine 5.8 87 3 S serine 12.3 184 3 T threonine 4.0 59 2 V valine 3.1 47 2 W tryptophan 1.0 15 2 Y tyrosine 1.8 27 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 shroom family member 4 SHROOM2 0.074 apical protein of Xenopus-like SHROOM3 0.073 shroom family member 3 protein SHROOM1 0.027 shroom family member 1 MYT1 0.015 myelin transcription factor 1 MYST4 0.015 MYST histone acetyltransferase (monocytic leukemia)... TTBK1 0.013 tau tubulin kinase 1 PDLIM5 0.013 PDZ and LIM domain 5 isoform a PELP1 0.012 proline, glutamic acid and leucine rich protein 1 [... RANGAP1 0.012 Ran GTPase activating protein 1 SYNPO2 0.012 synaptopodin 2 isoform c SYNPO2 0.012 synaptopodin 2 isoform b SYNPO2 0.012 synaptopodin 2 isoform a PDLIM5 0.012 PDZ and LIM domain 5 isoform d PDLIM5 0.012 PDZ and LIM domain 5 isoform b LOC100289089 0.011 PREDICTED: hypothetical protein XP_002343359 PDLIM5 0.011 PDZ and LIM domain 5 isoform e PRDM2 0.011 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.011 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.011 retinoblastoma protein-binding zinc finger protein i... CDC2L2 0.011 cell division cycle 2-like 2 isoform 4 CDC2L2 0.011 cell division cycle 2-like 2 isoform 1 CDC2L1 0.011 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.011 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.011 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.011 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.011 cell division cycle 2-like 1 (PITSLRE proteins) isof... C3orf44 0.011 hypothetical protein LOC131831 MAML2 0.011 mastermind-like 2 CDC2L1 0.011 cell division cycle 2-like 1 (PITSLRE proteins) isof... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.