Guide to the Human Genome
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Name: FOXG1 Sequence: fasta or formatted (489aa) NCBI GI: 32307177
Description:

forkhead box G1

Referenced in:

FOX Family
Retroviral Oncogene Homologs

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         36           3
 C cysteine            1.0          5           1
 D aspartate           3.7         18           3
 E glutamate           3.7         18           2
 F phenylalanine       2.9         14           2
 G glycine             9.8         48           3
 H histidine           6.1         30          11
 I isoleucine          2.0         10           1
 K lysine              5.1         25           2
 L leucine             7.8         38           3
 M methionine          2.5         12           2
 N asparagine          4.7         23           2
 P proline            12.9         63           8
 Q glutamine           4.1         20           4
 R arginine            3.7         18           3
 S serine             11.0         54           3
 T threonine           5.1         25           2
 V valine              2.9         14           1
 W tryptophan          0.6          3           1
 Y tyrosine            3.1         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   forkhead box G1 
FOXI3                 0.146   forkhead box I3 
FOXD3                 0.134   forkhead box D3 
FOXD1                 0.126   forkhead box D1 
FOXD2                 0.122   forkhead box D2 
FOXE1                 0.121   forkhead box E1 
FOXC2                 0.118   forkhead box C2 
FOXI1                 0.117   forkhead box I1 isoform a 
FOXL2                 0.116   forkhead box L2 
FOXC1                 0.116   forkhead box C1 
FOXF2                 0.114   forkhead box F2 
FOXA3                 0.114   forkhead box A3 
FOXI2                 0.113   forkhead box I2 
FOXL1                 0.111   forkhead box L1 
FOXF1                 0.109   forkhead box F1 
FOXB1                 0.106   forkhead box B1 
FOXS1                 0.104   forkhead box S1 
FOXE3                 0.104   forkhead box E3 
FOXD4L3               0.104   forkhead box D4-like 3 
FOXD4L2               0.104   forkhead box D4-like 2 
FOXD4L5               0.104   forkhead box D4-like 5 
FOXD4L6               0.104   forkhead box D4-like 6 
FOXD4L4               0.104   forkhead box D4-like 4 
FOXD4L1               0.103   forkhead box D4-like 1 
FOXQ1                 0.102   forkhead box Q1 
FOXD4                 0.102   forkhead box D4 
FOXK2                 0.101   forkhead box K2 
FOXA2                 0.101   forkhead box A2 isoform 2 
FOXA2                 0.101   forkhead box A2 isoform 1 
FOXA1                 0.099   forkhead box A1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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