Guide to the Human Genome
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Name: VGLL2 Sequence: fasta or formatted (317aa) NCBI GI: 32880231
Description:

vestigial-like 2 isoform 1

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [143aa] vestigial-like 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.5         46           3
 C cysteine            2.2          7           1
 D aspartate           2.5          8           1
 E glutamate           4.7         15           3
 F phenylalanine       3.5         11           1
 G glycine             7.9         25           2
 H histidine           5.0         16           2
 I isoleucine          0.9          3           1
 K lysine              1.9          6           1
 L leucine             6.3         20           2
 M methionine          1.6          5           1
 N asparagine          0.9          3           1
 P proline            13.9         44           3
 Q glutamine           4.1         13           1
 R arginine            3.8         12           2
 S serine             14.2         45           3
 T threonine           2.2          7           1
 V valine              3.2         10           2
 W tryptophan          1.3          4           1
 Y tyrosine            5.4         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   vestigial-like 2 isoform 1 
VGLL2                 0.379   vestigial-like 2 isoform 2 
VGLL3                 0.200   colon carcinoma related protein 
VGLL1                 0.062   vestigial like 1 
SF3B4                 0.045   splicing factor 3b, subunit 4 
SHANK1                0.043   SH3 and multiple ankyrin repeat domains 1 
ATN1                  0.039   atrophin-1 
ATN1                  0.039   atrophin-1 
LDB3                  0.037   LIM domain binding 3 isoform 1 
LDB3                  0.034   LIM domain binding 3 isoform 2 
FOXG1                 0.034   forkhead box G1 
NACA                  0.033   nascent polypeptide-associated complex alpha subuni...
FOXB2                 0.033   forkhead box B2 
LOC729991-MEF2B       0.029   myocyte enhancer factor 2B isoform b 
DCAF10                0.028   WD repeat domain 32 
TNRC18                0.028   trinucleotide repeat containing 18 
WIPF3                 0.028   WAS/WASL interacting protein family, member 3 [Homo...
OLIG2                 0.026   oligodendrocyte lineage transcription factor 2 [Homo...
FOXE1                 0.026   forkhead box E1 
PRCC                  0.026   papillary renal cell carcinoma translocation-associa...
PRCC                  0.026   papillary renal cell carcinoma translocation-associa...
FBRSL1                0.026   fibrosin-like 1 
MAFB                  0.025   transcription factor MAFB 
PRR7                  0.025   proline rich 7 (synaptic) 
FUSSEL18              0.025   PREDICTED: functional smad suppressing element 18 [...
KAT2A                 0.025   general control of amino acid synthesis 5-like 2 [H...
CASKIN2               0.025   cask-interacting protein 2 isoform b 
CASKIN2               0.025   cask-interacting protein 2 isoform a 
ONECUT3               0.025   one cut homeobox 3 
FUSSEL18              0.023   PREDICTED: functional smad suppressing element 18 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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