Guide to the Human Genome
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Name: ENDOG Sequence: fasta or formatted (297aa) NCBI GI: 53759134
Description:

endonuclease G precursor

Referenced in:

DNases, Recombination, and DNA Repair
Mitochondria

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.1         36           4
 C cysteine            1.0          3           1
 D aspartate           4.4         13           2
 E glutamate           5.7         17           1
 F phenylalanine       2.7          8           2
 G glycine             9.1         27           2
 H histidine           2.4          7           1
 I isoleucine          2.7          8           1
 K lysine              3.4         10           1
 L leucine            11.1         33           2
 M methionine          1.0          3           1
 N asparagine          3.7         11           2
 P proline             7.1         21           2
 Q glutamine           2.7          8           1
 R arginine            9.8         29           4
 S serine              5.1         15           1
 T threonine           3.4         10           1
 V valine              7.4         22           2
 W tryptophan          1.3          4           1
 Y tyrosine            4.0         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   endonuclease G precursor 
EXOG                  0.267   endo/exonuclease (5'-3'), endonuclease G-like isofo...
EXOG                  0.239   endo/exonuclease (5'-3'), endonuclease G-like isofo...
FKBP3                 0.016   FK506 binding protein 3, 25kDa 
PRICKLE3              0.014   LIM domain only 6 
EEFSEC                0.012   eukaryotic elongation factor, selenocysteine-tRNA-sp...
COL1A1                0.010   alpha 1 type I collagen preproprotein 
COL10A1               0.010   type X collagen alpha 1 precursor 
COL4A1                0.009   alpha 1 type IV collagen preproprotein 
BSN                   0.009   bassoon protein 
COL11A1               0.009   alpha 1 type XI collagen isoform B preproprotein [Ho...
COL11A1               0.009   alpha 1 type XI collagen isoform C preproprotein [Ho...
COL11A1               0.009   alpha 1 type XI collagen isoform A preproprotein [Ho...
COL3A1                0.009   collagen type III alpha 1 preproprotein 
NPTXR                 0.009   neuronal pentraxin receptor 
LOC100292048          0.009   PREDICTED: hypothetical protein XP_002344877 
LOC100289126          0.009   PREDICTED: hypothetical protein XP_002343381 
ELN                   0.009   elastin isoform e precursor 
ELN                   0.009   elastin isoform d precursor 
ELN                   0.009   elastin isoform c precursor 
ELN                   0.009   elastin isoform b precursor 
ELN                   0.009   elastin isoform a precursor 
DRAP1                 0.009   DR1-associated protein 1 
COL4A3                0.009   alpha 3 type IV collagen isoform 5 precursor 
COL4A3                0.009   alpha 3 type IV collagen isoform 4 precursor 
COL4A3                0.009   alpha 3 type IV collagen isoform 2 precursor 
COL4A3                0.009   alpha 3 type IV collagen isoform 1 precursor 
ENDOD1                0.009   endonuclease domain containing 1 
COL4A6                0.007   type IV alpha 6 collagen isoform A precursor 
COL4A6                0.007   type IV alpha 6 collagen isoform B precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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