Guide to the Human Genome
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Name: DRAP1 Sequence: fasta or formatted (205aa) NCBI GI: 18426973
Description:

DR1-associated protein 1

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         15           3
 C cysteine            1.0          2           1
 D aspartate           8.8         18           1
 E glutamate           8.8         18           3
 F phenylalanine       3.4          7           1
 G glycine             7.3         15           2
 H histidine           2.0          4           1
 I isoleucine          2.9          6           2
 K lysine              9.3         19           4
 L leucine             6.3         13           2
 M methionine          2.9          6           1
 N asparagine          2.0          4           1
 P proline            10.2         21           3
 Q glutamine           5.4         11           2
 R arginine            3.9          8           2
 S serine              8.8         18           1
 T threonine           5.9         12           2
 V valine              2.9          6           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.0          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DR1-associated protein 1 
NFYC                  0.079   nuclear transcription factor Y, gamma isoform 5 [Ho...
NFYC                  0.079   nuclear transcription factor Y, gamma isoform 1 [Ho...
NFYC                  0.079   nuclear transcription factor Y, gamma isoform 3 [Ho...
NFYC                  0.079   nuclear transcription factor Y, gamma isoform 2 [Hom...
POLE4                 0.051   DNA-directed DNA polymerase epsilon 4 
MLL4                  0.051   myeloid/lymphoid or mixed-lineage leukemia 4 
C19orf61              0.048   hypothetical protein LOC56006 
DVL2                  0.043   dishevelled 2 
SAPS1                 0.038   SAPS domain family, member 1 
CHRAC1                0.038   chromatin accessibility complex 1 
CRKRS                 0.036   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.036   Cdc2-related kinase, arginine/serine-rich isoform 1...
WBP11                 0.036   WW domain binding protein 11 
KDM6B                 0.036   lysine (K)-specific demethylase 6B 
TCOF1                 0.036   Treacher Collins-Franceschetti syndrome 1 isoform f...
TCOF1                 0.036   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.036   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.036   Treacher Collins-Franceschetti syndrome 1 isoform b ...
TCOF1                 0.036   Treacher Collins-Franceschetti syndrome 1 isoform a ...
TCOF1                 0.036   Treacher Collins-Franceschetti syndrome 1 isoform c ...
FAM75A4               0.033   PREDICTED: family with sequence similarity 75, memb...
POLE3                 0.033   DNA-directed DNA polymerase epsilon 3 
RPGR                  0.033   retinitis pigmentosa GTPase regulator isoform C [Hom...
FAM75A3               0.033   hypothetical protein LOC727830 
FAM75A5               0.033   hypothetical protein LOC727905 
FAM75A6               0.033   hypothetical protein LOC389730 
FAM75A7               0.033   hypothetical protein LOC26165 
BCL11B                0.033   B-cell CLL/lymphoma 11B isoform 1 
BCL11B                0.033   B-cell CLL/lymphoma 11B isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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