EEFSEC 32697

Name: EEFSEC	Sequence: fasta or formatted (596aa)		NCBI GI: 54607086
Description: eukaryotic elongation factor, selenocysteine-tRNA-specific		Referenced in: Selenium Proteins Translation Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 44 2 C cysteine 1.8 11 1 D aspartate 4.7 28 2 E glutamate 6.0 36 2 F phenylalanine 4.4 26 2 G glycine 7.6 45 2 H histidine 3.0 18 1 I isoleucine 6.4 38 2 K lysine 6.7 40 2 L leucine 10.2 61 2 M methionine 2.7 16 2 N asparagine 1.7 10 1 P proline 6.5 39 1 Q glutamine 5.0 30 2 R arginine 5.0 30 2 S serine 6.9 41 2 T threonine 6.0 36 2 V valine 6.5 39 3 W tryptophan 0.2 1 1 Y tyrosine 1.2 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 eukaryotic elongation factor, selenocysteine-tRNA-sp... TUFM 0.078 Tu translation elongation factor, mitochondrial prec... EEF1A2 0.061 eukaryotic translation elongation factor 1 alpha 2 [H... EIF2S3 0.058 eukaryotic translation initiation factor 2, subunit 3... LOC100293909 0.055 PREDICTED: similar to eukaryotic translation elonga... EEF1A1 0.050 eukaryotic translation elongation factor 1 alpha 1 [H... HBS1L 0.047 Hsp70 subfamily B suppressor 1-like protein isoform... HBS1L 0.047 Hsp70 subfamily B suppressor 1-like protein isoform 1... MTIF2 0.041 mitochondrial translational initiation factor 2 prec... MTIF2 0.041 mitochondrial translational initiation factor 2 prec... EIF5B 0.030 eukaryotic translation initiation factor 5B GTPBP1 0.029 GTP binding protein 1 GSPT1 0.028 G1 to S phase transition 1 isoform 3 GSPT1 0.028 G1 to S phase transition 1 isoform 2 GSPT1 0.028 G1 to S phase transition 1 isoform 1 GSPT2 0.022 peptide chain release factor 3 GTPBP2 0.022 GTP binding protein 2 GUF1 0.021 GUF1 GTPase homolog EEF2 0.017 eukaryotic translation elongation factor 2 EFTUD1 0.017 elongation factor Tu GTP binding domain containing 1... LOC727963 0.010 PREDICTED: similar to elongation factor Tu GTP bind... LOC727963 0.010 PREDICTED: similar to elongation factor Tu GTP bind... LOC727963 0.010 PREDICTED: similar to elongation factor Tu GTP bind... GFM2 0.010 mitochondrial elongation factor G2 isoform 2 GFM2 0.010 mitochondrial elongation factor G2 isoform 3 GFM2 0.010 mitochondrial elongation factor G2 isoform 1 EFTUD1 0.010 elongation factor Tu GTP binding domain containing 1... RFC1 0.009 replication factor C large subunit GFM1 0.008 G elongation factor, mitochondrial 1 EFTUD2 0.007 elongation factor Tu GTP binding domain containing ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.