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Search of human proteins with 13259533
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13259533 arginine vasopressin-neurophysin II preproprotein
[Homo sapiens]
(164 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13259533 arginine vasopressin-neurophysin II preproprotein [H... 356 6e-99
gi|4505537 oxytocin-neurophysin I preproprotein [Homo sapiens] 204 4e-53
gi|148727298 keratin associated protein 10-6 [Homo sapiens] 35 0.029
gi|38490568 keratin associated protein 10-4 [Homo sapiens] 35 0.038
gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens] 34 0.065
gi|123173777 keratin associated protein 5-8 [Homo sapiens] 33 0.085
gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens] 33 0.11
gi|54792100 erbB-3 isoform 1 precursor [Homo sapiens] 33 0.14
gi|144953895 nidogen 2 precursor [Homo sapiens] 33 0.14
gi|126012573 low density lipoprotein-related protein 2 [Homo sap... 32 0.19
gi|169790825 odz, odd Oz/ten-m homolog 4 [Homo sapiens] 32 0.25
gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens] 32 0.32
gi|4585710 ADAM metallopeptidase domain 11 preproprotein [Homo s... 32 0.32
gi|4885631 tyrosine kinase with immunoglobulin-like and EGF-like... 31 0.42
gi|23957702 transmembrane protease, serine 6 [Homo sapiens] 31 0.42
gi|122891874 keratin associated protein 5-5 [Homo sapiens] 31 0.42
gi|93102379 low density lipoprotein-related protein 1B precursor... 31 0.55
gi|145701025 multiple EGF-like-domains 8 [Homo sapiens] 31 0.55
gi|61743980 stabilin 2 precursor [Homo sapiens] 31 0.55
gi|38490587 keratin associated protein 10-12 [Homo sapiens] 31 0.55
gi|54400749 keratin associated protein 5-1 [Homo sapiens] 31 0.55
gi|125490370 type I hair keratin KA36 [Homo sapiens] 30 0.72
gi|61744471 low density lipoprotein receptor-related protein 8 i... 30 0.72
gi|65301119 low density lipoprotein receptor-related protein 8 i... 30 0.72
gi|21704279 jagged 2 isoform b precursor [Homo sapiens] 30 0.72
gi|21704277 jagged 2 isoform a precursor [Homo sapiens] 30 0.72
gi|238859649 keratin associated protein 10-8 [Homo sapiens] 30 0.94
gi|60593038 keratin associated protein 5-4 [Homo sapiens] 30 0.94
gi|54873613 agrin [Homo sapiens] 30 1.2
gi|74136023 delta-like 1 homolog [Homo sapiens] 30 1.2
>gi|13259533 arginine vasopressin-neurophysin II preproprotein [Homo
sapiens]
Length = 164
Score = 356 bits (913), Expect = 6e-99
Identities = 164/164 (100%), Positives = 164/164 (100%)
Query: 1 MPDTMLPACFLGLLAFSSACYFQNCPRGGKRAMSDLELRQCLPCGPGGKGRCFGPSICCA 60
MPDTMLPACFLGLLAFSSACYFQNCPRGGKRAMSDLELRQCLPCGPGGKGRCFGPSICCA
Sbjct: 1 MPDTMLPACFLGLLAFSSACYFQNCPRGGKRAMSDLELRQCLPCGPGGKGRCFGPSICCA 60
Query: 61 DELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAAFGVCCNDESCVTEPECREGF 120
DELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAAFGVCCNDESCVTEPECREGF
Sbjct: 61 DELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAAFGVCCNDESCVTEPECREGF 120
Query: 121 HRRARASDRSNATQLDGPAGALLLRLVQLAGAPEPFEPAQPDAY 164
HRRARASDRSNATQLDGPAGALLLRLVQLAGAPEPFEPAQPDAY
Sbjct: 121 HRRARASDRSNATQLDGPAGALLLRLVQLAGAPEPFEPAQPDAY 164
>gi|4505537 oxytocin-neurophysin I preproprotein [Homo sapiens]
Length = 125
Score = 204 bits (518), Expect = 4e-53
Identities = 87/116 (75%), Positives = 97/116 (83%)
Query: 1 MPDTMLPACFLGLLAFSSACYFQNCPRGGKRAMSDLELRQCLPCGPGGKGRCFGPSICCA 60
M L C LGLLA +SACY QNCP GGKRA DL++R+CLPCGPGGKGRCFGP+ICCA
Sbjct: 1 MAGPSLACCLLGLLALTSACYIQNCPLGGKRAAPDLDVRKCLPCGPGGKGRCFGPNICCA 60
Query: 61 DELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAAFGVCCNDESCVTEPEC 116
+ELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCA G+CC+ + C +P C
Sbjct: 61 EELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAVLGLCCSPDGCHADPAC 116
>gi|148727298 keratin associated protein 10-6 [Homo sapiens]
Length = 365
Score = 35.0 bits (79), Expect = 0.029
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 17/112 (15%)
Query: 7 PACFLGLLAFSSACYFQNCPRGGKRAMSDLELRQCLP--CGPGGKGRCFGPSICCADELG 64
P C + + S+C Q+ + S + C+P C P C G S C +
Sbjct: 122 PVCCVSVCCGDSSCCQQSSCQSACCTSSPCQQACCVPVCCKPV----CSGISSSCCQQSS 177
Query: 65 CFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAAFGVCCNDESCVTEPEC 116
C + + C + PSPCQSG C S + CC SC +P C
Sbjct: 178 CV--SCVSSPCCQAVCEPSPCQSG---CTS----SCTPSCCQQSSC--QPTC 218
Score = 32.7 bits (73), Expect = 0.14
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 8/75 (10%)
Query: 43 PCGPGGKGRCFGPSICCADELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAAFG 102
PC G C PS C + C + + CQ+ +P C++ C C +
Sbjct: 76 PCQSGCTSSCT-PS--CCQQSSCQLACCASSPCQQACCVPVCCKT---VCCKPVCCVS-- 127
Query: 103 VCCNDESCVTEPECR 117
VCC D SC + C+
Sbjct: 128 VCCGDSSCCQQSSCQ 142
>gi|38490568 keratin associated protein 10-4 [Homo sapiens]
Length = 401
Score = 34.7 bits (78), Expect = 0.038
Identities = 34/132 (25%), Positives = 47/132 (35%), Gaps = 28/132 (21%)
Query: 7 PACFLGLLAFSSACYFQNCPRGGKRAMSDLELRQCLP--CGPGGKGRCFGPSICCADELG 64
P C + + S+C Q+ + S + C+P C P C G S C +
Sbjct: 122 PVCCVPVCCGDSSCCQQSSCQSACCTSSPCQQACCVPICCKPV----CSGISSSCCQQSS 177
Query: 65 CFVGTAEALRCQEENYLPSPCQSG---------------QKACGSGGRC---AAFGVCCN 106
C + + C + PSPCQSG Q AC + C VCC
Sbjct: 178 CV--SCVSSPCCQAVCEPSPCQSGCISSCTPSCCQQSSCQPACCTSSSCQQACCVPVCCK 235
Query: 107 DESCVTEPECRE 118
C +P C E
Sbjct: 236 TVCC--KPVCSE 245
Score = 32.0 bits (71), Expect = 0.25
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 8/75 (10%)
Query: 43 PCGPGGKGRCFGPSICCADELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAAFG 102
PC G C PS C + C + + CQ+ +P C++ C C
Sbjct: 76 PCQSGCTSSCT-PS--CCQQSSCQLACCASSPCQQACCVPVCCKT---VCCKPVCCVP-- 127
Query: 103 VCCNDESCVTEPECR 117
VCC D SC + C+
Sbjct: 128 VCCGDSSCCQQSSCQ 142
Score = 28.5 bits (62), Expect = 2.7
Identities = 27/100 (27%), Positives = 36/100 (36%), Gaps = 14/100 (14%)
Query: 17 SSACYFQNCPRGGKRAMSDLELRQCLPCGPGGKGRCFGPSICCADELGCFVGTAEALRCQ 76
SS+C Q+ + S + C+P C P C A +L CQ
Sbjct: 247 SSSCCQQSSCQPACCTSSPCQQACCVPV-------CCKPVCCKPVGSVPICSGASSLCCQ 299
Query: 77 EENYLPSPCQSGQKACGSGGRCAAFGVCCNDESCVTEPEC 116
+ + P+ C S Q G VCC SCV P C
Sbjct: 300 QSSCQPACCTSSQSQQG-----CCVPVCCKPVSCV--PVC 332
>gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens]
Length = 4242
Score = 33.9 bits (76), Expect = 0.065
Identities = 32/121 (26%), Positives = 44/121 (36%), Gaps = 22/121 (18%)
Query: 20 CYFQNCPRGGKRAMSDLELRQCLPCGPGGKGRCFGPSICCADELGCFVGTAEALRCQEEN 79
C ++CPRG + E +C+ C PG G G C G ++ RC++
Sbjct: 275 CGMRSCPRGCSQR-GRCENGRCV-CNPGYTGEDCGVRSCPR-------GCSQRGRCKDGR 325
Query: 80 YLPSPCQSGQKA--------CGSGGRCAAFGVCC----NDESCVTEPECREGFHRRARAS 127
+ P +G+ CG GGRC C E C T C R R
Sbjct: 326 CVCDPGYTGEDCGTRSCPWDCGEGGRCVDGRCVCWPGYTGEDCSTR-TCPRDCRGRGRCE 384
Query: 128 D 128
D
Sbjct: 385 D 385
Score = 29.6 bits (65), Expect = 1.2
Identities = 48/195 (24%), Positives = 64/195 (32%), Gaps = 54/195 (27%)
Query: 17 SSACYFQNCPRGGKRAMSDLELRQCLPCGPGGKGRCFGPSICCADELG----------CF 66
S C + CP E +CL C PG G +C AD G C
Sbjct: 613 SEDCSIRTCP-SNCHGRGRCEEGRCL-CDPGYTGPTCATRMCPADCRGRGRCVQGVCLCH 670
Query: 67 VGTAEALRCQEE---NYLPSPC------QSGQKACGSG--GRCAAFGVC---------CN 106
VG QEE + P C ++GQ C G G A C C+
Sbjct: 671 VGYGGEDCGQEEPPASACPGGCGPRELCRAGQCVCVEGFRGPDCAIQTCPGDCRGRGECH 730
Query: 107 DESCVTEPECREGF-----------------HRRARASDRSNATQLDGPAGALLLRLVQL 149
D SCV C++G+ H + R+ T GP A ++ +
Sbjct: 731 DGSCV----CKDGYAGEDCGEEVPTIEGMRMHLLEETTVRTEWTPAPGPVDAYEIQFIPT 786
Query: 150 A-GAPEPFEPAQPDA 163
GA PF P +
Sbjct: 787 TEGASPPFTARVPSS 801
>gi|123173777 keratin associated protein 5-8 [Homo sapiens]
Length = 187
Score = 33.5 bits (75), Expect = 0.085
Identities = 26/82 (31%), Positives = 30/82 (36%), Gaps = 6/82 (7%)
Query: 41 CLPCG--PGGKGRCFGPSICCADELGCFVGTAEALRCQEENYLPSPCQSGQKACGSG-GR 97
C CG GG+G C G C G G Q Y P C SG CGS +
Sbjct: 50 CGSCGGSKGGRGSCGGSKGDCGSCGGSKGGCGSCGCSQCSCYKPCCCSSG---CGSSCCQ 106
Query: 98 CAAFGVCCNDESCVTEPECREG 119
+ CC+ SC C G
Sbjct: 107 SSCCKPCCSQSSCCKPCSCSSG 128
Score = 29.6 bits (65), Expect = 1.2
Identities = 31/123 (25%), Positives = 42/123 (34%), Gaps = 12/123 (9%)
Query: 7 PACFLGLLAFSSACYFQNCPRGGKRAMSDLELRQCLPCGPGGKGRC--FGPSIC-----C 59
P C S+C +GG+ + + C CG G KG C G S C C
Sbjct: 37 PVCCCVPACSCSSCGSCGGSKGGRGSCGGSK-GDCGSCG-GSKGGCGSCGCSQCSCYKPC 94
Query: 60 ADELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAAFGVC---CNDESCVTEPEC 116
GC ++ C+ S C+ + G G C C C+ SC C
Sbjct: 95 CCSSGCGSSCCQSSCCKPCCSQSSCCKPCSCSSGCGSSCCQSSCCKPCCSQSSCCKPCCC 154
Query: 117 REG 119
G
Sbjct: 155 SSG 157
>gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens]
Length = 2765
Score = 33.1 bits (74), Expect = 0.11
Identities = 27/91 (29%), Positives = 34/91 (37%), Gaps = 23/91 (25%)
Query: 25 CPRGGKRAMSDLELRQCLPCGPGGKGRCF-GPSICCADELGCFVGTAEALRCQEENYLPS 83
C G K A D+ + QC+ GG G C G +C A G C+E + L
Sbjct: 624 CYSGWKGAECDVPMNQCIDPSCGGHGSCIDGNCVCSAGYKG--------EHCEEVDCLDP 675
Query: 84 PCQSGQKACGSGGRCAAFGVCCNDESCVTEP 114
C S GVC N E C+ P
Sbjct: 676 TCSS-------------HGVCVNGE-CLCSP 692
>gi|54792100 erbB-3 isoform 1 precursor [Homo sapiens]
Length = 1342
Score = 32.7 bits (73), Expect = 0.14
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 39 RQCLPCGPGGKGRCFGPSICCADELGCFVGTAEALRCQEENYLPSPCQSGQKACGSG 95
R C PC KGRC+GP +++ T A +C + P+P Q C G
Sbjct: 181 RSCPPCHEVCKGRCWGPG---SEDCQTLTKTICAPQCNGHCFGPNPNQCCHDECAGG 234
>gi|144953895 nidogen 2 precursor [Homo sapiens]
Length = 1375
Score = 32.7 bits (73), Expect = 0.14
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 11/51 (21%)
Query: 83 SPCQSGQKACGSGGRC-----------AAFGVCCNDESCVTEPECREGFHR 122
+PC G C + RC A G + +CV E EC GFHR
Sbjct: 761 NPCYDGSHMCDTTARCHPGTGVDYTCECASGYQGDGRNCVDENECATGFHR 811
>gi|126012573 low density lipoprotein-related protein 2 [Homo sapiens]
Length = 4655
Score = 32.3 bits (72), Expect = 0.19
Identities = 34/115 (29%), Positives = 45/115 (39%), Gaps = 14/115 (12%)
Query: 34 SDLELRQCL--PCGPGGKGRCFGPSICCADEL-----GCFVGTAEALR-CQEENYLPSPC 85
SD EL CL PC + RC + E+ C GT E C++ P PC
Sbjct: 3871 SDEELHLCLDVPCNSPNRFRCDNNRCIYSHEVCNGVDDCGDGTDETEEHCRKPT--PKPC 3928
Query: 86 QSGQKACGSGGRCAAFGVCCNDESC---VTEPECREGFHRR-ARASDRSNATQLD 136
+ CG+G VC + + C E C +G R A N TQL+
Sbjct: 3929 TEYEYKCGNGHCIPHDNVCDDADDCGDWSDELGCNKGKERTCAENICEQNCTQLN 3983
Score = 31.6 bits (70), Expect = 0.32
Identities = 25/74 (33%), Positives = 28/74 (37%), Gaps = 22/74 (29%)
Query: 44 CGPG----GKGRCFGPSICC--ADELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGR 97
CG G RC G C ADE+GC V T CQ G C S G+
Sbjct: 35 CGSGHCIPADWRCDGTKDCSDDADEIGCAVVT---------------CQQGYFKCQSEGQ 79
Query: 98 CAAFG-VCCNDESC 110
C VC D+ C
Sbjct: 80 CIPNSWVCDQDQDC 93
Score = 28.1 bits (61), Expect = 3.6
Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 5/62 (8%)
Query: 50 GRCFGPSICCADELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRC-AAFGVCCNDE 108
GRC C E CF + E C + C + + C GGRC + +C D
Sbjct: 2874 GRCIPQHWYCDQETDCFDASDEPASC---GHSERTCLADEFKC-DGGRCIPSEWICDGDN 2929
Query: 109 SC 110
C
Sbjct: 2930 DC 2931
>gi|169790825 odz, odd Oz/ten-m homolog 4 [Homo sapiens]
Length = 2769
Score = 32.0 bits (71), Expect = 0.25
Identities = 26/78 (33%), Positives = 33/78 (42%), Gaps = 10/78 (12%)
Query: 44 CGPGGKGRCFGPSICCADELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAAFGV 103
C P G IC AD G V RC E+ ++ + C Q+AC RCA G
Sbjct: 715 CDPSWTGHDCSIEICAADCGGHGVCVGGTCRC-EDGWMGAACD--QRACHP--RCAEHGT 769
Query: 104 CCNDESCVTEPECREGFH 121
C D C EC G++
Sbjct: 770 -CRDGKC----ECSPGWN 782
>gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens]
Length = 4391
Score = 31.6 bits (70), Expect = 0.32
Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 9/73 (12%)
Query: 42 LPCGPGG----KGRCFGPSICCADELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGR 97
LPCGP G C C + C G+ E L C P PC+ + CG+G
Sbjct: 283 LPCGPQEAACRNGHCIPRDYLCDGQEDCEDGSDE-LDCGP----PPPCEPNEFPCGNGHC 337
Query: 98 CAAFGVCCNDESC 110
C D C
Sbjct: 338 ALKLWRCDGDFDC 350
Score = 27.7 bits (60), Expect = 4.6
Identities = 22/71 (30%), Positives = 27/71 (38%), Gaps = 10/71 (14%)
Query: 16 FSSACYFQN--------CPRG--GKRAMSDLELRQCLPCGPGGKGRCFGPSICCADELGC 65
FS C+ C G G+R S + P PGGK R I DE G
Sbjct: 825 FSDTCFLDTDGQATCDACAPGYTGRRCESCAPGYEGNPIQPGGKCRPVNQEIVRCDERGS 884
Query: 66 FVGTAEALRCQ 76
+ EA RC+
Sbjct: 885 MGTSGEACRCK 895
>gi|4585710 ADAM metallopeptidase domain 11 preproprotein [Homo
sapiens]
Length = 769
Score = 31.6 bits (70), Expect = 0.32
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 75 CQEENYLPSPCQSGQKACGSGGR--CAAFGVCCNDESCVTEPECRE---GFHRRARASDR 129
C + LP+ + GSG R C+ GVC N+ C+ +P+ H S
Sbjct: 661 CLDHRCLPASAFNFSTCPGSGERRICSHHGVCSNEGKCICQPDWTGKDCSIHNPLPTSPP 720
Query: 130 SNATQ-LDGPAGALLLRLVQLAGA 152
+ T+ GP+G ++ + +AGA
Sbjct: 721 TGETERYKGPSGTNII-IGSIAGA 743
>gi|4885631 tyrosine kinase with immunoglobulin-like and EGF-like
domains 1 [Homo sapiens]
Length = 1138
Score = 31.2 bits (69), Expect = 0.42
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Query: 39 RQCLPCGPGGKGRCFGPSICCADELGCFVGTA-EALRCQE---ENYLPSPCQSGQKACGS 94
+ C PG G C G + C D GC G+ +CQE + + C+ Q C +
Sbjct: 266 QSCQEQCPGISG-CRGLTFCLPDPYGCSCGSGWRGSQCQEACAPGHFGADCRL-QCQCQN 323
Query: 95 GGRCAAFGVC 104
GG C F C
Sbjct: 324 GGTCDRFSGC 333
>gi|23957702 transmembrane protease, serine 6 [Homo sapiens]
Length = 811
Score = 31.2 bits (69), Expect = 0.42
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 21/78 (26%)
Query: 61 DELGCFVGTAEALRCQEENY---LPSPCQ--------SGQKACGSGGRCAAFGVCCNDES 109
DE C +C+E++ LP C S ++ C G C F C D S
Sbjct: 485 DERNCVCRAT--FQCKEDSTCISLPKVCDGQPDCLNGSDEEQCQEGVPCGTFTFQCEDRS 542
Query: 110 CVTE--------PECREG 119
CV + P+CR+G
Sbjct: 543 CVKKPNPQCDGRPDCRDG 560
>gi|122891874 keratin associated protein 5-5 [Homo sapiens]
Length = 237
Score = 31.2 bits (69), Expect = 0.42
Identities = 25/91 (27%), Positives = 28/91 (30%), Gaps = 15/91 (16%)
Query: 41 CLPCGPGGKGRCFGPSICCADELGCFVGTAEALRCQEENYLPSPCQSGQKACGS-GGRCA 99
C CG GG G C G C + C V C C + CGS GG
Sbjct: 81 CSSCGKGGCGSCGGSKRGC---VSCGVSKGACGSCGGSKGGCGSCGGSKGGCGSCGGSKG 137
Query: 100 AFGVC-----------CNDESCVTEPECREG 119
G C C+ SC C G
Sbjct: 138 GCGSCGGSKGGCGSYGCSQSSCCKPCCCSSG 168
Score = 30.4 bits (67), Expect = 0.72
Identities = 23/73 (31%), Positives = 24/73 (32%), Gaps = 3/73 (4%)
Query: 44 CGPGGKGRCFGPSICCADELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAAFGV 103
CG G GR G C + GC G C C SG CG G V
Sbjct: 10 CGSGCGGRGSGCGGCGSGCGGCGSGCGG---CGSGCGGCGGCGSGCAGCGGCGSGCCVPV 66
Query: 104 CCNDESCVTEPEC 116
CC C P C
Sbjct: 67 CCCKPMCCCVPAC 79
>gi|93102379 low density lipoprotein-related protein 1B precursor
[Homo sapiens]
Length = 4599
Score = 30.8 bits (68), Expect = 0.55
Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 11/80 (13%)
Query: 44 CGPG----GKGRCFGPSICCADELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCA 99
C PG G G C P+ C E C + E L C C SGQ C +C
Sbjct: 3357 CQPGRFQCGTGLCALPAFICDGENDCGDNSDE-LNCDTH-----VCLSGQFKCTKNQKCI 3410
Query: 100 AFGVCCN-DESCVTEPECRE 118
+ CN + C E + R+
Sbjct: 3411 PVNLRCNGQDDCGDEEDERD 3430
>gi|145701025 multiple EGF-like-domains 8 [Homo sapiens]
Length = 2778
Score = 30.8 bits (68), Expect = 0.55
Identities = 39/138 (28%), Positives = 46/138 (33%), Gaps = 28/138 (20%)
Query: 2 PDTMLPACFLGLLAFSSACYFQNCPRGGKRAMSDLELRQCLP-------CGPGGKGRCF- 53
P +LP C +S + G + + L+QCL C GG GR
Sbjct: 1993 PCHLLPNC-------TSCLDSKGADGGWQHCVWSSSLQQCLSPSYLPLRCMAGGCGRLLR 2045
Query: 54 GPSICCADELGCFVGT--AEALRCQEENYLPSPCQSGQKACGSGG--------RCAAFGV 103
GP C LGC T A LR + Q G C GG C G
Sbjct: 2046 GPESC---SLGCAQATQCALCLRRPHCGWCAWGGQDGGGRCMEGGLSGPRDGLTCGRPGA 2102
Query: 104 CCNDESCVTEPECREGFH 121
SC E EC G H
Sbjct: 2103 SWAFLSCPPEDECANGHH 2120
>gi|61743980 stabilin 2 precursor [Homo sapiens]
Length = 2551
Score = 30.8 bits (68), Expect = 0.55
Identities = 31/116 (26%), Positives = 36/116 (31%), Gaps = 28/116 (24%)
Query: 40 QCLPCGPGGKGRCFGPSICCADELGC--------FVGTA--------------EALRCQE 77
QC PC + CFG IC G F GTA +A C
Sbjct: 1344 QCQPCPGNAQNVCFGNGICLDGVNGTGVCECGEGFSGTACETCTEGKYGIHCDQACSCVH 1403
Query: 78 ENYLPSPCQSGQKACGSGGRCAAFGVCCNDESCVTEPECREGFHRRARASDRSNAT 133
P G C G R GV C ++ TE C H A S+ T
Sbjct: 1404 GRCNQGPLGDGSCDCDVGWR----GVHC--DNATTEDNCNGTCHTSANCLTNSDGT 1453
>gi|38490587 keratin associated protein 10-12 [Homo sapiens]
Length = 245
Score = 30.8 bits (68), Expect = 0.55
Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 5/65 (7%)
Query: 52 CFGPSICCADELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAAFGVCCNDESCV 111
C GPS C + C + CQ+ +P C + C A +CC SC
Sbjct: 124 CCGPSSSCCQQSSCQPACCISSPCQQSCCVPVCC---KPICCVPVCSGASSLCCQQSSC- 179
Query: 112 TEPEC 116
+P C
Sbjct: 180 -QPAC 183
Score = 27.3 bits (59), Expect = 6.1
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 11/65 (16%)
Query: 52 CFGPSICCADELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAAFGVCCNDESCV 111
C P+ C + L C + + C PSPCQSG C S + CC SC
Sbjct: 41 CCAPAPCLS--LVCTPVSRVSSPCCRVTCEPSPCQSG---CTS----SCTPSCCQQSSC- 90
Query: 112 TEPEC 116
+P C
Sbjct: 91 -QPAC 94
>gi|54400749 keratin associated protein 5-1 [Homo sapiens]
Length = 278
Score = 30.8 bits (68), Expect = 0.55
Identities = 23/74 (31%), Positives = 25/74 (33%), Gaps = 6/74 (8%)
Query: 41 CLPCGPGGKGRCFGPSICCADELGCFVGTAEALRCQ----EENYLPSPCQSGQKACGSGG 96
C CG GG G C C G G C+ C SG CGSG
Sbjct: 149 CSSCGKGGCGSCGCSKGACGSCGGSKGGCGSCGGCKGGCGSCGGSKGGCGSGCGGCGSG- 207
Query: 97 RCAAFGVCCNDESC 110
C CC+ SC
Sbjct: 208 -CGVPVCCCSCSSC 220
Score = 30.4 bits (67), Expect = 0.72
Identities = 24/87 (27%), Positives = 25/87 (28%), Gaps = 11/87 (12%)
Query: 41 CLPCGPGGKGRCFGPSICCADELGCFVGTAEAL-------RCQEENYLPSPCQSGQKACG 93
C CG GG G G C GC G C C + CG
Sbjct: 61 CSSCGKGGCGSSGGSKGGCGSCGGCKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCG 120
Query: 94 SG----GRCAAFGVCCNDESCVTEPEC 116
SG G VCC C P C
Sbjct: 121 SGCGGCGSSCCVPVCCCKPMCCCVPAC 147
Score = 27.7 bits (60), Expect = 4.6
Identities = 19/61 (31%), Positives = 22/61 (36%), Gaps = 3/61 (4%)
Query: 45 GPGGKGRCFGPSICCADELGCFVGTAEALRCQEENYLPSPCQSGQKACGS-GGRCAAFGV 103
G GG G +CC + C V C + C G ACGS GG G
Sbjct: 122 GCGGCGSSCCVPVCCCKPMCCCVPACSCSSCGKGGCGSCGCSKG--ACGSCGGSKGGCGS 179
Query: 104 C 104
C
Sbjct: 180 C 180
Score = 27.3 bits (59), Expect = 6.1
Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 4/60 (6%)
Query: 41 CLPCGPG--GKGRCFGPSICCADELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRC 98
C CG G G G +CC + C V T C + S G CGS G C
Sbjct: 28 CGGCGSGCGGSGSSCCVPVCCCKPVCCRVPTCSCSSCGKGGCGSSGGSKG--GCGSCGGC 85
Score = 26.9 bits (58), Expect = 7.9
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 4/36 (11%)
Query: 85 CQSGQKACGSG----GRCAAFGVCCNDESCVTEPEC 116
C SG CGSG G VCC C P C
Sbjct: 24 CGSGCGGCGSGCGGSGSSCCVPVCCCKPVCCRVPTC 59
>gi|125490370 type I hair keratin KA36 [Homo sapiens]
Length = 431
Score = 30.4 bits (67), Expect = 0.72
Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 34 SDLELRQCLPCGPGGKGRCFGPSICCADELGCFVGTAEALRCQEENYL 81
SD C P G C P+ C+ E C GT RCQ ++L
Sbjct: 3 SDCSSTHCSPESCGTASGC-APASSCSVETACLPGTCATSRCQTPSFL 49
>gi|61744471 low density lipoprotein receptor-related protein 8
isoform 1 precursor [Homo sapiens]
Length = 963
Score = 30.4 bits (67), Expect = 0.72
Identities = 25/92 (27%), Positives = 34/92 (36%), Gaps = 12/92 (13%)
Query: 23 QNCPRGGKRAMSDLELRQC----LPCGPGGKGRCFGPSICCADELGCFVGTAEALRCQEE 78
+ CP G + + + C L CGP +C S C E C G EA
Sbjct: 109 EECPDGSDESEATCTKQVCPAEKLSCGPTSH-KCVPASWRCDGEKDCEGGADEA------ 161
Query: 79 NYLPSPCQSGQKACGSGGRCAAFGVCCNDESC 110
+ C + CG+ AA VC D+ C
Sbjct: 162 -GCATLCAPHEFQCGNRSCLAAVFVCDGDDDC 192
>gi|65301119 low density lipoprotein receptor-related protein 8
isoform 4 precursor [Homo sapiens]
Length = 904
Score = 30.4 bits (67), Expect = 0.72
Identities = 25/92 (27%), Positives = 34/92 (36%), Gaps = 12/92 (13%)
Query: 23 QNCPRGGKRAMSDLELRQC----LPCGPGGKGRCFGPSICCADELGCFVGTAEALRCQEE 78
+ CP G + + + C L CGP +C S C E C G EA
Sbjct: 109 EECPDGSDESEATCTKQVCPAEKLSCGPTSH-KCVPASWRCDGEKDCEGGADEA------ 161
Query: 79 NYLPSPCQSGQKACGSGGRCAAFGVCCNDESC 110
+ C + CG+ AA VC D+ C
Sbjct: 162 -GCATLCAPHEFQCGNRSCLAAVFVCDGDDDC 192
>gi|21704279 jagged 2 isoform b precursor [Homo sapiens]
Length = 1200
Score = 30.4 bits (67), Expect = 0.72
Identities = 28/121 (23%), Positives = 39/121 (32%), Gaps = 41/121 (33%)
Query: 25 CPRGGKRAMSDLELRQCLPCGPGGKGRCFG--------------PSICCADELGCFVGTA 70
CP G + + D CLP +GRC+ C + E C T
Sbjct: 624 CPSGWEGELCDTNPNDCLPDPCHSRGRCYDLVNDFYCACDDGWKGKTCHSREFQCDAYTC 683
Query: 71 ----------EALRC--------------QEENYLPSPCQSGQKACGSGGRCAAFGVCCN 106
+ RC + + LP+PC +G GSG A+F C
Sbjct: 684 SNGGTCYDSGDTFRCACPPGWKGSTCAVAKNSSCLPNPCVNGGTCVGSG---ASFSCICR 740
Query: 107 D 107
D
Sbjct: 741 D 741
Score = 29.3 bits (64), Expect = 1.6
Identities = 24/82 (29%), Positives = 30/82 (36%), Gaps = 5/82 (6%)
Query: 44 CGPGGKGRCFGPSICCADELGCFVGTA-EALRCQ-EENYLPSPCQSGQKACGSGGRCAAF 101
C G +GR C GC G+ E +C E N+ C CGS C
Sbjct: 264 CSYGWQGRFCDE---CVPYPGCVHGSCVEPWQCNCETNWGGLLCDKDLNYCGSHHPCTNG 320
Query: 102 GVCCNDESCVTEPECREGFHRR 123
G C N E C +G+ R
Sbjct: 321 GTCINAEPDQYRCTCPDGYSGR 342
Score = 28.5 bits (62), Expect = 2.7
Identities = 27/104 (25%), Positives = 38/104 (36%), Gaps = 23/104 (22%)
Query: 24 NCPRGGKRAMSDLELRQCLPCGPGGKGRCF---GPSIC-CADELGCFVGTAEALRCQEEN 79
+CP+G + ++++ C P RC+ G C C D+ G C
Sbjct: 485 HCPQGFSGPLCEVDVDLCEPSPCRNGARCYNLEGDYYCACPDDFG-------GKNCSVPR 537
Query: 80 YLPSPCQSGQ----KACGSGG-----RCAAFGVCCNDESCVTEP 114
PC G CGS AA GVC CV++P
Sbjct: 538 ---EPCPGGACRVIDGCGSDAGPGMPGTAASGVCGPHGRCVSQP 578
>gi|21704277 jagged 2 isoform a precursor [Homo sapiens]
Length = 1238
Score = 30.4 bits (67), Expect = 0.72
Identities = 28/121 (23%), Positives = 39/121 (32%), Gaps = 41/121 (33%)
Query: 25 CPRGGKRAMSDLELRQCLPCGPGGKGRCFG--------------PSICCADELGCFVGTA 70
CP G + + D CLP +GRC+ C + E C T
Sbjct: 662 CPSGWEGELCDTNPNDCLPDPCHSRGRCYDLVNDFYCACDDGWKGKTCHSREFQCDAYTC 721
Query: 71 ----------EALRC--------------QEENYLPSPCQSGQKACGSGGRCAAFGVCCN 106
+ RC + + LP+PC +G GSG A+F C
Sbjct: 722 SNGGTCYDSGDTFRCACPPGWKGSTCAVAKNSSCLPNPCVNGGTCVGSG---ASFSCICR 778
Query: 107 D 107
D
Sbjct: 779 D 779
Score = 29.3 bits (64), Expect = 1.6
Identities = 24/82 (29%), Positives = 30/82 (36%), Gaps = 5/82 (6%)
Query: 44 CGPGGKGRCFGPSICCADELGCFVGTA-EALRCQ-EENYLPSPCQSGQKACGSGGRCAAF 101
C G +GR C GC G+ E +C E N+ C CGS C
Sbjct: 264 CSYGWQGRFCDE---CVPYPGCVHGSCVEPWQCNCETNWGGLLCDKDLNYCGSHHPCTNG 320
Query: 102 GVCCNDESCVTEPECREGFHRR 123
G C N E C +G+ R
Sbjct: 321 GTCINAEPDQYRCTCPDGYSGR 342
Score = 28.5 bits (62), Expect = 2.7
Identities = 27/104 (25%), Positives = 38/104 (36%), Gaps = 23/104 (22%)
Query: 24 NCPRGGKRAMSDLELRQCLPCGPGGKGRCF---GPSIC-CADELGCFVGTAEALRCQEEN 79
+CP+G + ++++ C P RC+ G C C D+ G C
Sbjct: 523 HCPQGFSGPLCEVDVDLCEPSPCRNGARCYNLEGDYYCACPDDFG-------GKNCSVPR 575
Query: 80 YLPSPCQSGQ----KACGSGG-----RCAAFGVCCNDESCVTEP 114
PC G CGS AA GVC CV++P
Sbjct: 576 ---EPCPGGACRVIDGCGSDAGPGMPGTAASGVCGPHGRCVSQP 616
>gi|238859649 keratin associated protein 10-8 [Homo sapiens]
Length = 259
Score = 30.0 bits (66), Expect = 0.94
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 21/79 (26%)
Query: 56 SICCADELGCFVGTAEALRCQEENYLPSPCQSG---------------QKACGSGGRC-- 98
S CC C AL C + PSPCQSG Q AC + C
Sbjct: 58 SSCCTPSC-CAPAPCLALVCAPVSCEPSPCQSGCTDSCTPSCCQQSSCQPACCTSSPCQQ 116
Query: 99 -AAFGVCCNDESCVTEPEC 116
VCC C +P C
Sbjct: 117 ACCVPVCCKSNCC--KPVC 133
>gi|60593038 keratin associated protein 5-4 [Homo sapiens]
Length = 288
Score = 30.0 bits (66), Expect = 0.94
Identities = 24/100 (24%), Positives = 32/100 (32%), Gaps = 10/100 (10%)
Query: 28 GGKRAMSDLELRQCLPCGP-----GGKGRCFGPSIC--CADELGCFVGTAEALRCQEENY 80
G K QC C P G C S C C GC ++ C+
Sbjct: 186 GSKGGCGSCGCSQCSCCKPCCCSSGCGSSCCQSSCCKPCCSSSGCGSSCCQSSCCKPYCC 245
Query: 81 LPSPCQSGQKACGSGGRC---AAFGVCCNDESCVTEPECR 117
S C+ + G G C + CC+ SC C+
Sbjct: 246 QSSCCKPCCSSSGCGSSCCQSSCCNPCCSQSSCCVPVCCQ 285
>gi|54873613 agrin [Homo sapiens]
Length = 2045
Score = 29.6 bits (65), Expect = 1.2
Identities = 28/92 (30%), Positives = 35/92 (38%), Gaps = 26/92 (28%)
Query: 44 CGPGGKGRCFGPSICCAD--------ELGCFVGTAEALRCQEEN--------YLPSPCQS 87
CG GR GP+ C AD E+ C G RC EE+ L P +
Sbjct: 877 CGQCPDGRALGPAGCEADASAPATCAEMRCEFGA----RCVEESGSAHCVCPMLTCPEAN 932
Query: 88 GQKACGSGGRCAAFGVCCNDESCVTEPECREG 119
K CGS GV +E + CR+G
Sbjct: 933 ATKVCGSD------GVTYGNECQLKTIACRQG 958
Score = 27.3 bits (59), Expect = 6.1
Identities = 24/70 (34%), Positives = 27/70 (38%), Gaps = 11/70 (15%)
Query: 43 PCGP--GGKGRCFGPSICCADELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAA 100
P GP G G +G S C E C T Q E PC+ Q CGSGG +
Sbjct: 627 PPGPVCGSDGVTYG-SACELREAACLQQT------QIEEARAGPCE--QAECGSGGSGSG 677
Query: 101 FGVCCNDESC 110
C E C
Sbjct: 678 EDGDCEQELC 687
>gi|74136023 delta-like 1 homolog [Homo sapiens]
Length = 383
Score = 29.6 bits (65), Expect = 1.2
Identities = 32/134 (23%), Positives = 43/134 (32%), Gaps = 14/134 (10%)
Query: 7 PACFLGLLAFSSACYFQNCPRGGKRAMSDLELRQCLPCGPGGKGRCFGPSICCAD---EL 63
P C GL C C G + D ++R C G C + D E
Sbjct: 61 PGCLHGLCGEPGQCI---CTDGWDGELCDRDVRACSSAPCANNGTC----VSLDDGLYEC 113
Query: 64 GCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAAFGVCCNDESCVTEPECREGFHRR 123
C G + CQ+++ PC C GG C + SC+ P F
Sbjct: 114 SCAPGYS-GKDCQKKD---GPCVINGSPCQHGGTCVDDEGRASHASCLCPPGFSGNFCEI 169
Query: 124 ARASDRSNATQLDG 137
S N + DG
Sbjct: 170 VANSCTPNPCENDG 183
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.140 0.470
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,292,572
Number of Sequences: 37866
Number of extensions: 445859
Number of successful extensions: 1271
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 1188
Number of HSP's gapped (non-prelim): 167
length of query: 164
length of database: 18,247,518
effective HSP length: 94
effective length of query: 70
effective length of database: 14,688,114
effective search space: 1028167980
effective search space used: 1028167980
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.