Guide to the Human Genome
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Name: KRTAP5-8 Sequence: fasta or formatted (187aa) NCBI GI: 123173777
Description:

keratin associated protein 5-8

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.5          1           1
 C cysteine           35.3         66           3
 D aspartate           0.5          1           1
 E glutamate           0.0          0           0
 F phenylalanine       0.0          0           0
 G glycine            18.7         35           2
 H histidine           0.0          0           0
 I isoleucine          1.6          3           1
 K lysine              5.9         11           1
 L leucine             0.0          0           0
 M methionine          0.5          1           1
 N asparagine          0.0          0           0
 P proline             5.3         10           1
 Q glutamine           4.3          8           1
 R arginine            0.5          1           1
 S serine             24.1         45           2
 T threonine           0.0          0           0
 V valine              2.1          4           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.5          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 5-8 
KRTAP5-3              0.865   keratin associated protein 5-3 
KRTAP5-7              0.763   keratin associated protein 5-7 
KRTAP5-4              0.704   keratin associated protein 5-4 
KRTAP5-9              0.700   keratin associated protein 5-9 
KRTAP5-5              0.673   keratin associated protein 5-5 
KRTAP5-1              0.637   keratin associated protein 5-1 
KRTAP5-11             0.612   keratin associated protein 5-11 
KRTAP5-10             0.612   keratin associated protein 5-10 
KRTAP5-2              0.612   keratin associated protein 5-2 
KRTAP5-6              0.591   keratin associated protein 5-6 
KRTAP4-3              0.327   keratin associated protein 4-3 
KRTAP4-9              0.314   keratin associated protein 4-9 
KRTAP4-8              0.314   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.314   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.314   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-8              0.309   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.309   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-11             0.300   keratin associated protein 4-11 
KRTAP4-8              0.298   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.298   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.298   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-8              0.291   PREDICTED: keratin associated protein 4-8 
KRTAP4-12             0.287   keratin associated protein 4-12 
KRTAP10-4             0.280   keratin associated protein 10-4 
KRTAP4-5              0.275   keratin associated protein 4-5 
KRTAP10-7             0.275   keratin associated protein 10-7 
KRTAP4-8              0.273   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.273   keratin associated protein 4.8 
KRTAP4-4              0.271   keratin associated protein 4.4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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