Guide to the Human Genome
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Name: KRTAP10-12 Sequence: fasta or formatted (245aa) NCBI GI: 38490587
Description:

keratin associated protein 10-12

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         10           1
 C cysteine           25.7         63           2
 D aspartate           2.0          5           2
 E glutamate           1.2          3           1
 F phenylalanine       0.0          0           0
 G glycine             2.9          7           1
 H histidine           0.0          0           0
 I isoleucine          0.8          2           1
 K lysine              1.2          3           1
 L leucine             4.5         11           2
 M methionine          0.8          2           1
 N asparagine          0.0          0           0
 P proline            12.7         31           2
 Q glutamine           6.5         16           2
 R arginine            4.5         11           2
 S serine             19.6         48           3
 T threonine           4.1         10           2
 V valine              8.6         21           1
 W tryptophan          0.4          1           1
 Y tyrosine            0.4          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 10-12 
KRTAP10-8             0.748   keratin associated protein 10-8 
KRTAP10-9             0.739   keratin associated protein 10-9 
KRTAP10-1             0.739   keratin associated protein 10-1 
KRTAP10-11            0.715   keratin associated protein 10-11 
KRTAP10-6             0.706   keratin associated protein 10-6 
KRTAP10-4             0.702   keratin associated protein 10-4 
KRTAP10-7             0.695   keratin associated protein 10-7 
KRTAP10-5             0.686   keratin associated protein 10-5 
KRTAP10-10            0.675   keratin associated protein 10-10 
KRTAP10-2             0.608   keratin associated protein 10-2 
KRTAP10-3             0.517   keratin associated protein 10-3 
LOC100130599          0.465   PREDICTED: hypothetical protein 
LOC100130599          0.460   PREDICTED: similar to Keratin-associated protein 10...
KRTAP4-8              0.327   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.327   PREDICTED: similar to keratin associated protein 4-...
LOC100131696          0.318   PREDICTED: keratin associated protein 
LOC100288060          0.318   PREDICTED: hypothetical protein XP_002343557 
LOC100131696          0.316   PREDICTED: keratin associated protein 
KRTAP4-12             0.316   keratin associated protein 4-12 
KRTAP4-9              0.314   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-9              0.312   keratin associated protein 4-9 
KRTAP4-3              0.311   keratin associated protein 4-3 
KRTAP4-9              0.301   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-8              0.298   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.298   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-11             0.296   keratin associated protein 4-11 
KRTAP4-8              0.290   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.283   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.283   PREDICTED: similar to keratin associated protein 4-...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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