Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ODZ4 Sequence: fasta or formatted (2769aa) NCBI GI: 169790825
Description:

odz, odd Oz/ten-m homolog 4

Referenced in:

Additional Brain Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1        142           3
 C cysteine            2.9         81           2
 D aspartate           6.2        172           2
 E glutamate           4.8        134           2
 F phenylalanine       3.8        104           2
 G glycine             8.7        242           2
 H histidine           3.0         83           2
 I isoleucine          4.9        137           3
 K lysine              3.7        102           2
 L leucine             8.7        241           3
 M methionine          2.0         56           2
 N asparagine          5.0        139           3
 P proline             5.0        138           4
 Q glutamine           3.8        104           2
 R arginine            5.9        164           3
 S serine              8.1        223           3
 T threonine           7.1        196           2
 V valine              5.8        161           3
 W tryptophan          1.3         36           1
 Y tyrosine            4.1        114           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   odz, odd Oz/ten-m homolog 4 
ODZ3                  0.676   odz, odd Oz/ten-m homolog 3 
ODZ1                  0.641   odz, odd Oz/ten-m homolog 1 isoform 1 
ODZ1                  0.640   odz, odd Oz/ten-m homolog 1 isoform 2 
ODZ1                  0.637   odz, odd Oz/ten-m homolog 1 isoform 3 
ODZ2                  0.634   odz, odd Oz/ten-m homolog 2 
TNC                   0.035   tenascin C precursor 
TNXB                  0.034   tenascin XB isoform 1 precursor 
NOTCH2                0.021   notch 2 preproprotein 
ITGBL1                0.020   integrin, beta-like 1 (with EGF-like repeat domains) ...
VWDE                  0.020   von Willebrand factor D and EGF domains 
JAG1                  0.020   jagged 1 precursor 
JAG2                  0.020   jagged 2 isoform a precursor 
NOTCH1                0.020   notch1 preproprotein 
MEGF10                0.019   multiple EGF-like-domains 10 
JAG2                  0.019   jagged 2 isoform b precursor 
NOTCH4                0.019   notch4 preproprotein 
NOTCH3                0.019   Notch homolog 3 
EYS                   0.019   eyes shut homolog isoform 1 
PEAR1                 0.019   platelet endothelial aggregation receptor 1 
TNR                   0.018   tenascin R 
MEGF6                 0.018   EGF-like-domain, multiple 3 
MEGF11                0.018   multiple EGF-like-domains 11 
SCARF1                0.018   scavenger receptor class F, member 1 isoform 3 precu...
SCARF1                0.018   scavenger receptor class F, member 1 isoform 1 precu...
WIF1                  0.017   WNT inhibitory factor 1 precursor 
DNER                  0.017   delta-notch-like EGF repeat-containing transmembran...
SNED1                 0.017   6720455I24Rik homolog 
DLL1                  0.016   delta-like 1 
CRB1                  0.016   crumbs homolog 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press