Guide to the Human Genome
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Name: KRTAP10-8 Sequence: fasta or formatted (259aa) NCBI GI: 238859649
Description:

keratin associated protein 10-8

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         21           2
 C cysteine           25.5         66           2
 D aspartate           1.5          4           1
 E glutamate           1.2          3           1
 F phenylalanine       0.8          2           1
 G glycine             1.9          5           1
 H histidine           0.8          2           1
 I isoleucine          1.5          4           1
 K lysine              1.5          4           1
 L leucine             3.1          8           2
 M methionine          0.8          2           1
 N asparagine          0.8          2           1
 P proline            10.8         28           1
 Q glutamine           6.2         16           2
 R arginine            3.1          8           1
 S serine             19.3         50           3
 T threonine           4.6         12           2
 V valine              7.7         20           1
 W tryptophan          0.4          1           1
 Y tyrosine            0.4          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 10-8 
KRTAP10-12            0.712   keratin associated protein 10-12 
KRTAP10-1             0.670   keratin associated protein 10-1 
KRTAP10-9             0.638   keratin associated protein 10-9 
KRTAP10-11            0.638   keratin associated protein 10-11 
KRTAP10-7             0.603   keratin associated protein 10-7 
KRTAP10-5             0.601   keratin associated protein 10-5 
KRTAP10-4             0.591   keratin associated protein 10-4 
KRTAP10-10            0.589   keratin associated protein 10-10 
KRTAP10-2             0.563   keratin associated protein 10-2 
KRTAP10-6             0.552   keratin associated protein 10-6 
LOC100130599          0.455   PREDICTED: hypothetical protein 
LOC100130599          0.448   PREDICTED: similar to Keratin-associated protein 10...
KRTAP10-3             0.446   keratin associated protein 10-3 
KRTAP4-8              0.316   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.316   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.301   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-9              0.297   keratin associated protein 4-9 
KRTAP4-12             0.295   keratin associated protein 4-12 
KRTAP4-3              0.295   keratin associated protein 4-3 
KRTAP4-11             0.290   keratin associated protein 4-11 
LOC100131696          0.290   PREDICTED: keratin associated protein 
KRTAP4-8              0.283   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.283   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.283   PREDICTED: keratin associated protein 4-8 
LOC100131696          0.281   PREDICTED: keratin associated protein 
LOC100288060          0.281   PREDICTED: hypothetical protein XP_002343557 
KRTAP4-8              0.274   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.274   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.273   PREDICTED: keratin associated protein 4-9 isoform 2...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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