Guide to the Human Genome
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Name: OXT Sequence: fasta or formatted (125aa) NCBI GI: 4505537
Description:

oxytocin-neurophysin I preproprotein

Referenced in:

Hypothalamus
Peptide and Protein G-coupled Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.0         15           2
 C cysteine           14.4         18           2
 D aspartate           4.0          5           1
 E glutamate           4.8          6           2
 F phenylalanine       2.4          3           1
 G glycine            13.6         17           2
 H histidine           0.8          1           1
 I isoleucine          1.6          2           1
 K lysine              3.2          4           1
 L leucine            11.2         14           2
 M methionine          0.8          1           1
 N asparagine          2.4          3           1
 P proline             8.0         10           1
 Q glutamine           4.0          5           1
 R arginine            4.8          6           1
 S serine              5.6          7           1
 T threonine           2.4          3           1
 V valine              2.4          3           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.6          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   oxytocin-neurophysin I preproprotein 
AVP                   0.708   arginine vasopressin-neurophysin II preproprotein [H...
KRTAP5-1              0.051   keratin associated protein 5-1 
VWDE                  0.043   von Willebrand factor D and EGF domains 
LAMB2                 0.036   laminin, beta 2 precursor 
ERBB3                 0.036   erbB-3 isoform 1 precursor 
TIE1                  0.028   tyrosine kinase with immunoglobulin-like and EGF-like...
KRTAP17-1             0.028   keratin associated protein 17-1 
KRTAP5-5              0.028   keratin associated protein 5-5 
IGFBP3                0.028   insulin-like growth factor binding protein 3 isoform...
IGFBP3                0.028   insulin-like growth factor binding protein 3 isoform...
ODZ2                  0.028   odz, odd Oz/ten-m homolog 2 
LRP2                  0.028   low density lipoprotein-related protein 2 
NOTCH3                0.024   Notch homolog 3 
TNXB                  0.024   tenascin XB isoform 1 precursor 
KRTAP5-8              0.024   keratin associated protein 5-8 
HSPG2                 0.024   heparan sulfate proteoglycan 2 
KRTAP10-4             0.024   keratin associated protein 10-4 
KRTAP10-6             0.020   keratin associated protein 10-6 
FAT4                  0.020   FAT tumor suppressor homolog 4 
PEAR1                 0.020   platelet endothelial aggregation receptor 1 
IGFBPL1               0.020   insulin-like growth factor binding protein-like 1 [H...
KRTAP5-3              0.020   keratin associated protein 5-3 
LTBP4                 0.020   latent transforming growth factor beta binding prot...
LTBP4                 0.020   latent transforming growth factor beta binding prot...
LTBP4                 0.020   latent transforming growth factor beta binding prot...
KRTAP5-11             0.020   keratin associated protein 5-11 
KRTAP10-8             0.016   keratin associated protein 10-8 
KRTAP10-12            0.016   keratin associated protein 10-12 
KRT40                 0.016   type I hair keratin KA36 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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