Guide to the Human Genome
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Name: DLK1 Sequence: fasta or formatted (383aa) NCBI GI: 74136023
Description:

delta-like 1 homolog

Referenced in:

Notch Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         19           1
 C cysteine            9.9         38           1
 D aspartate           5.2         20           2
 E glutamate           5.5         21           2
 F phenylalanine       3.1         12           1
 G glycine             9.9         38           2
 H histidine           2.1          8           1
 I isoleucine          3.4         13           2
 K lysine              4.4         17           3
 L leucine             9.7         37           5
 M methionine          1.0          4           1
 N asparagine          5.0         19           2
 P proline             6.5         25           2
 Q glutamine           4.2         16           2
 R arginine            3.7         14           1
 S serine              6.0         23           2
 T threonine           6.5         25           2
 V valine              6.0         23           2
 W tryptophan          0.8          3           1
 Y tyrosine            2.1          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   delta-like 1 homolog 
DLK2                  0.268   EGF-like-domain, multiple 9 
DLK2                  0.268   EGF-like-domain, multiple 9 
DLL1                  0.247   delta-like 1 
DLL4                  0.237   delta-like 4 protein precursor 
JAG1                  0.221   jagged 1 precursor 
JAG2                  0.218   jagged 2 isoform b precursor 
JAG2                  0.214   jagged 2 isoform a precursor 
NOTCH2                0.177   notch 2 preproprotein 
NOTCH1                0.170   notch1 preproprotein 
DLL3                  0.167   delta-like 3 protein isoform 1 precursor 
DLL3                  0.167   delta-like 3 protein isoform 2 precursor 
NOTCH3                0.165   Notch homolog 3 
CRB2                  0.164   crumbs homolog 2 
SVEP1                 0.160   polydom 
EYS                   0.155   eyes shut homolog isoform 1 
CRB1                  0.155   crumbs homolog 1 precursor 
NOTCH4                0.151   notch4 preproprotein 
DNER                  0.146   delta-notch-like EGF repeat-containing transmembran...
SNED1                 0.145   6720455I24Rik homolog 
NOTCH2NL              0.143   Notch homolog 2 N-terminal like protein 
SLIT2                 0.136   slit homolog 2 
SLIT1                 0.136   slit homolog 1 
SLIT3                 0.124   slit homolog 3 
VWDE                  0.114   von Willebrand factor D and EGF domains 
MEGF10                0.114   multiple EGF-like-domains 10 
MEGF11                0.112   multiple EGF-like-domains 11 
FAT1                  0.109   FAT tumor suppressor 1 precursor 
TNC                   0.105   tenascin C precursor 
ODZ3                  0.104   odz, odd Oz/ten-m homolog 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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