Guide to the Human Genome
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Name: ERBB3 Sequence: fasta or formatted (1342aa) NCBI GI: 54792100
Description:

erbB-3 isoform 1 precursor

Referenced in:

Epidermal Growth Factor

Other entries for this name:
alt prot [183aa] erbB-3 isoform s precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         70           2
 C cysteine            4.5         60           2
 D aspartate           4.7         63           2
 E glutamate           6.8         91           3
 F phenylalanine       2.6         35           1
 G glycine             9.1        122           3
 H histidine           3.4         46           2
 I isoleucine          3.4         45           1
 K lysine              3.8         51           2
 L leucine            10.0        134           3
 M methionine          2.5         34           2
 N asparagine          4.3         58           1
 P proline             6.9         93           2
 Q glutamine           3.8         51           1
 R arginine            6.0         81           4
 S serine              7.4         99           2
 T threonine           5.1         69           3
 V valine              6.3         84           2
 W tryptophan          1.1         15           1
 Y tyrosine            3.1         41           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   erbB-3 isoform 1 precursor 
ERBB4                 0.424   v-erb-a erythroblastic leukemia viral oncogene homolo...
ERBB4                 0.423   v-erb-a erythroblastic leukemia viral oncogene homo...
EGFR                  0.344   epidermal growth factor receptor isoform a precursor...
ERBB2                 0.321   erbB-2 isoform a 
ERBB2                 0.319   erbB-2 isoform b 
EGFR                  0.203   epidermal growth factor receptor isoform d precursor...
EGFR                  0.203   epidermal growth factor receptor isoform b precursor...
EGFR                  0.117   epidermal growth factor receptor isoform c precursor...
ERBB3                 0.091   erbB-3 isoform s precursor 
TNK2                  0.060   tyrosine kinase, non-receptor, 2 isoform 1 
TNK2                  0.060   tyrosine kinase, non-receptor, 2 isoform 2 
ABL2                  0.054   arg tyrosine kinase isoform c 
ABL2                  0.054   arg tyrosine kinase isoform b 
ABL2                  0.054   arg tyrosine kinase isoform d 
ABL2                  0.054   arg tyrosine kinase isoform a 
ABL2                  0.054   arg tyrosine kinase isoform e 
EPHA2                 0.053   ephrin receptor EphA2 
ABL1                  0.053   c-abl oncogene 1, receptor tyrosine kinase isoform a...
ABL1                  0.053   c-abl oncogene 1, receptor tyrosine kinase isoform b...
PTK2B                 0.053   PTK2B protein tyrosine kinase 2 beta isoform a [Homo...
PTK2B                 0.053   PTK2B protein tyrosine kinase 2 beta isoform b [Homo...
PTK2B                 0.053   PTK2B protein tyrosine kinase 2 beta isoform a [Homo...
PTK2B                 0.053   PTK2B protein tyrosine kinase 2 beta isoform a [Homo...
TXK                   0.052   TXK tyrosine kinase 
MST1R                 0.052   macrophage stimulating 1 receptor precursor 
SYK                   0.051   spleen tyrosine kinase isoform 2 
SYK                   0.051   spleen tyrosine kinase isoform 1 
PTK2                  0.051   PTK2 protein tyrosine kinase 2 isoform b 
PTK2                  0.051   PTK2 protein tyrosine kinase 2 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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