Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 4759074
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4759074 small inducible cytokine A16 precursor [Homo
sapiens]
(120 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4759074 small inducible cytokine A16 precursor [Homo sapiens] 245 6e-66
gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Hom... 75 1e-14
gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Hom... 75 1e-14
gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Hom... 74 3e-14
gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Hom... 73 4e-14
gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Hom... 73 4e-14
gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor ... 72 7e-14
gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens] 71 2e-13
gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor ... 70 4e-13
gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo sapiens] 68 2e-12
gi|22538814 small inducible cytokine A5 precursor [Homo sapiens] 65 9e-12
gi|22538816 small inducible cytokine A8 precursor [Homo sapiens] 60 4e-10
gi|4506831 small inducible cytokine A18 precursor [Homo sapiens] 60 5e-10
gi|4885587 small inducible cytokine A13 precursor [Homo sapiens] 58 2e-09
gi|4506829 small inducible cytokine A17 precursor [Homo sapiens] 56 5e-09
gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo sapiens] 56 7e-09
gi|4506835 small inducible cytokine A21 precursor [Homo sapiens] 55 1e-08
gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo sapi... 52 8e-08
gi|22538808 small inducible cytokine A23 isoform CKbeta8 precurs... 52 8e-08
gi|4506841 small inducible cytokine A2 precursor [Homo sapiens] 52 1e-07
gi|4506827 small inducible cytokine A11 precursor [Homo sapiens] 52 1e-07
gi|22165427 small inducible cytokine A24 precursor [Homo sapiens] 50 3e-07
gi|194239688 chemokine (C-C motif) ligand 20 isoform 2 [Homo sap... 49 7e-07
gi|4759076 chemokine (C-C motif) ligand 20 isoform 1 [Homo sapiens] 49 7e-07
gi|5454040 small inducible cytokine A19 precursor [Homo sapiens] 47 3e-06
gi|22538806 small inducible cytokine A23 isoform CKbeta8-1 precu... 45 1e-05
gi|22538804 small inducible cytokine A22 precursor [Homo sapiens] 44 3e-05
gi|10834988 chemokine (C-X-C motif) ligand 12 (stromal cell-deri... 40 4e-04
gi|76563933 chemokine (C-X-C motif) ligand 12 (stromal cell-deri... 40 4e-04
gi|40316924 chemokine (C-X-C motif) ligand 12 (stromal cell-deri... 40 4e-04
>gi|4759074 small inducible cytokine A16 precursor [Homo sapiens]
Length = 120
Score = 245 bits (625), Expect = 6e-66
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MKVSEAALSLLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGYRKALNC 60
MKVSEAALSLLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGYRKALNC
Sbjct: 1 MKVSEAALSLLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGYRKALNC 60
Query: 61 HLPAIIFVTKRNREVCTNPNDDWVQEYIKDPNLPLLPTRNLSTVKIITAKNGQPQLLNSQ 120
HLPAIIFVTKRNREVCTNPNDDWVQEYIKDPNLPLLPTRNLSTVKIITAKNGQPQLLNSQ
Sbjct: 61 HLPAIIFVTKRNREVCTNPNDDWVQEYIKDPNLPLLPTRNLSTVKIITAKNGQPQLLNSQ 120
>gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Homo
sapiens]
Length = 92
Score = 74.7 bits (182), Expect = 1e-14
Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 1 MKVSEAALSLLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGYRKALN- 59
MK+ LSLLVL+ S + S P + P+ CC Y + LPR VV Y + +
Sbjct: 1 MKLCVTVLSLLVLVAAFCSLALSAPMGSD---PPTACCFSYTARKLPRNFVVDYYETSSL 57
Query: 60 CHLPAIIFVTKRNREVCTNPNDDWVQEYIKDPNL 93
C PA++F TKR ++VC +P++ WVQEY+ D L
Sbjct: 58 CSQPAVVFQTKRGKQVCADPSESWVQEYVYDLEL 91
>gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Homo
sapiens]
Length = 92
Score = 74.7 bits (182), Expect = 1e-14
Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 1 MKVSEAALSLLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGYRKALN- 59
MK+ LSLLVL+ S + S P + P+ CC Y + LPR VV Y + +
Sbjct: 1 MKLCVTVLSLLVLVAAFCSLALSAPMGSD---PPTACCFSYTARKLPRNFVVDYYETSSL 57
Query: 60 CHLPAIIFVTKRNREVCTNPNDDWVQEYIKDPNL 93
C PA++F TKR ++VC +P++ WVQEY+ D L
Sbjct: 58 CSQPAVVFQTKRGKQVCADPSESWVQEYVYDLEL 91
>gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Homo
sapiens]
Length = 92
Score = 73.9 bits (180), Expect = 3e-14
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 1 MKVSEAALSLLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGYRKALN- 59
MK+ LSLL+L+ S + S P + P+ CC Y + LPR VV Y + +
Sbjct: 1 MKLCVTVLSLLMLVAAFCSPALSAPMGSD---PPTACCFSYTARKLPRNFVVDYYETSSL 57
Query: 60 CHLPAIIFVTKRNREVCTNPNDDWVQEYIKDPNL 93
C PA++F TKR+++VC +P++ WVQEY+ D L
Sbjct: 58 CSQPAVVFQTKRSKQVCADPSESWVQEYVYDLEL 91
>gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Homo
sapiens]
Length = 93
Score = 73.2 bits (178), Expect = 4e-14
Identities = 33/94 (35%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 1 MKVSEAALSLLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGY-RKALN 59
M+VS AAL++L+ + + + S P + TP+ CC Y + +P+ + Y +
Sbjct: 1 MQVSTAALAVLLCTMALCNQVLSAPLAAD---TPTACCFSYTSRQIPQNFIADYFETSSQ 57
Query: 60 CHLPAIIFVTKRNREVCTNPNDDWVQEYIKDPNL 93
C P++IF+TKR R+VC +P+++WVQ+Y+ D L
Sbjct: 58 CSKPSVIFLTKRGRQVCADPSEEWVQKYVSDLEL 91
>gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Homo
sapiens]
Length = 93
Score = 73.2 bits (178), Expect = 4e-14
Identities = 33/94 (35%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 1 MKVSEAALSLLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGY-RKALN 59
M+VS AAL++L+ + + + S P + TP+ CC Y + +P+ + Y +
Sbjct: 1 MQVSTAALAVLLCTMALCNQVLSAPLAAD---TPTACCFSYTSRQIPQNFIADYFETSSQ 57
Query: 60 CHLPAIIFVTKRNREVCTNPNDDWVQEYIKDPNL 93
C P++IF+TKR R+VC +P+++WVQ+Y+ D L
Sbjct: 58 CSKPSVIFLTKRGRQVCADPSEEWVQKYVSDLEL 91
>gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor
[Homo sapiens]
Length = 93
Score = 72.4 bits (176), Expect = 7e-14
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 1 MKVSEAALSLLVLILI-ITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGYRKALN 59
MK+S AA+ +LI I + + + S + P PS CC Y +PR+ ++ Y + +
Sbjct: 1 MKISVAAIPFFLLITIALGTKTESSSRGPYH---PSECCFTYTTYKIPRQRIMDYYETNS 57
Query: 60 -CHLPAIIFVTKRNREVCTNPNDDWVQEYIKD 90
C P I+F+TKR VCTNP+D WVQ+YIKD
Sbjct: 58 QCSKPGIVFITKRGHSVCTNPSDKWVQDYIKD 89
>gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens]
Length = 92
Score = 71.2 bits (173), Expect = 2e-13
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 1 MKVSEAALSLLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGY-RKALN 59
M+VS AAL+ +L+ T A +Q +TP+ CC Y + +P+ + Y +
Sbjct: 1 MQVSTAALA----VLLCTMALCNQFSASLAADTPTACCFSYTSRQIPQNFIADYFETSSQ 56
Query: 60 CHLPAIIFVTKRNREVCTNPNDDWVQEYIKDPNL 93
C P +IF+TKR+R+VC +P+++WVQ+Y+ D L
Sbjct: 57 CSKPGVIFLTKRSRQVCADPSEEWVQKYVSDLEL 90
>gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor
[Homo sapiens]
Length = 109
Score = 70.1 bits (170), Expect = 4e-13
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 15/105 (14%)
Query: 1 MKVSEAALSLLVLILII-------TSASRSQPKVPE-------WVNTPSTCCLKYYEKVL 46
MK+S AA+ +LI I +S + +PKV + PS CC Y +
Sbjct: 1 MKISVAAIPFFLLITIALGTKTESSSQTGGKPKVVKIQLKLVGGPYHPSECCFTYTTYKI 60
Query: 47 PRRLVVGYRKALN-CHLPAIIFVTKRNREVCTNPNDDWVQEYIKD 90
PR+ ++ Y + + C P I+F+TKR VCTNP+D WVQ+YIKD
Sbjct: 61 PRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKD 105
>gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo
sapiens]
Length = 99
Score = 67.8 bits (164), Expect = 2e-12
Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 5 EAALSLLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGYRKALNCHLP- 63
+A+ +LL L+L + S P +NT +TCC ++ K +P++ + YR+ + H P
Sbjct: 2 KASAALLCLLLTAAAFSPQGLAQPVGINTSTTCCYRFINKKIPKQRLESYRRTTSSHCPR 61
Query: 64 -AIIFVTKRNREVCTNPNDDWVQEYIK 89
A+IF TK ++E+C +P WVQ+++K
Sbjct: 62 EAVIFKTKLDKEICADPTQKWVQDFMK 88
>gi|22538814 small inducible cytokine A5 precursor [Homo sapiens]
Length = 91
Score = 65.5 bits (158), Expect = 9e-12
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 1 MKVSEAALSLLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGY-RKALN 59
MKVS AAL+++++ + + + + P + + + CC Y + LPR + Y +
Sbjct: 1 MKVSAAALAVILIATALCAPASASP----YSSDTTPCCFAYIARPLPRAHIKEYFYTSGK 56
Query: 60 CHLPAIIFVTKRNREVCTNPNDDWVQEYI 88
C PA++FVT++NR+VC NP WV+EYI
Sbjct: 57 CSNPAVVFVTRKNRQVCANPEKKWVREYI 85
>gi|22538816 small inducible cytokine A8 precursor [Homo sapiens]
Length = 99
Score = 60.1 bits (144), Expect = 4e-10
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 1 MKVSEAALSLLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGYRKALNC 60
MKVS A L LL++ + +QP + V+ P TCC + +P + + Y + N
Sbjct: 1 MKVSAALLCLLLMAATFSPQGLAQP---DSVSIPITCCFNVINRKIPIQRLESYTRITNI 57
Query: 61 HLP--AIIFVTKRNREVCTNPNDDWVQEYIK 89
P A+IF TKR +EVC +P + WV++ +K
Sbjct: 58 QCPKEAVIFKTKRGKEVCADPKERWVRDSMK 88
>gi|4506831 small inducible cytokine A18 precursor [Homo sapiens]
Length = 89
Score = 59.7 bits (143), Expect = 5e-10
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 8 LSLLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGYRKAL-NCHLPAII 66
L+ +L+L+ T A S +V CCL Y +P++ +V Y + C P +I
Sbjct: 4 LAAALLVLVCTMALCSCAQVG---TNKELCCLVYTSWQIPQKFIVDYSETSPQCPKPGVI 60
Query: 67 FVTKRNREVCTNPNDDWVQEYIKDPNL 93
+TKR R++C +PN WVQ+YI D L
Sbjct: 61 LLTKRGRQICADPNKKWVQKYISDLKL 87
>gi|4885587 small inducible cytokine A13 precursor [Homo sapiens]
Length = 98
Score = 57.8 bits (138), Expect = 2e-09
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 1 MKVSEAALSLLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGYRKALN- 59
MKVS L LL++ +QP +N PSTCC + K + + + Y +
Sbjct: 1 MKVSAVLLCLLLMTAAFNPQGLAQPDA---LNVPSTCCFTFSSKKISLQRLKSYVITTSR 57
Query: 60 CHLPAIIFVTKRNREVCTNPNDDWVQEYIK 89
C A+IF TK +E+C +P + WVQ Y+K
Sbjct: 58 CPQKAVIFRTKLGKEICADPKEKWVQNYMK 87
>gi|4506829 small inducible cytokine A17 precursor [Homo sapiens]
Length = 94
Score = 56.2 bits (134), Expect = 5e-09
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 6 AALSLLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLP-RRLVVGYRKALNCHLPA 64
A L +L L+ ++ AS N CCL+Y++ +P R+L Y+ + +C A
Sbjct: 2 APLKMLALVTLLLGASLQHIHAARGTNVGRECCLEYFKGAIPLRKLKTWYQTSEDCSRDA 61
Query: 65 IIFVTKRNREVCTNPNDDWVQEYIK 89
I+FVT + R +C++PN+ V+ +K
Sbjct: 62 IVFVTVQGRAICSDPNNKRVKNAVK 86
>gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo
sapiens]
Length = 94
Score = 55.8 bits (133), Expect = 7e-09
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 8 LSLLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGYRKALN-CHLPAII 66
LSL +L+ + S + TCC +Y K LP V Y N C A+I
Sbjct: 4 LSLASAVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQRAVI 63
Query: 67 FVTKRNREVCTNPNDDWVQEYI 88
F TKR ++VCT+P WVQ+YI
Sbjct: 64 FTTKRGKKVCTHPRKKWVQKYI 85
>gi|4506835 small inducible cytokine A21 precursor [Homo sapiens]
Length = 134
Score = 55.1 bits (131), Expect = 1e-08
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 10/88 (11%)
Query: 7 ALSLLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGYRK---ALNCHLP 63
ALSLL+L+L P+ CCLKY ++ +P ++V YRK +L C +P
Sbjct: 6 ALSLLILVLAF-----GIPRTQGSDGGAQDCCLKYSQRKIPAKVVRSYRKQEPSLGCSIP 60
Query: 64 AIIFVTKR--NREVCTNPNDDWVQEYIK 89
AI+F+ ++ E+C +P + WVQ+ ++
Sbjct: 61 AILFLPRKRSQAELCADPKELWVQQLMQ 88
>gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo
sapiens]
Length = 113
Score = 52.4 bits (124), Expect = 8e-08
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 1 MKVSEAALSLLVLILIITSASR----------------SQPKVPEWVNTPSTCCLKYYEK 44
MKVS AALS L+L+ ++ S ++ P V + + CC Y +
Sbjct: 1 MKVSVAALSCLMLVAVLGSQAQFINDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQ 60
Query: 45 VLPRRLVVGY-RKALNCHLPAIIFVTKRNREVCTNPNDDWVQEYIK 89
+P L+ Y + C P +IF+TK+ R+VC P+ VQ+ +K
Sbjct: 61 SIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMK 106
>gi|22538808 small inducible cytokine A23 isoform CKbeta8 precursor
[Homo sapiens]
Length = 120
Score = 52.4 bits (124), Expect = 8e-08
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 18/107 (16%)
Query: 1 MKVSEAALSLLVLILIITSASR---------SQPKVP--------EWVNTPSTCCLKYYE 43
MKVS AALS L+L+ + S +R K+P + T + CC+ Y
Sbjct: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYTP 60
Query: 44 KVLPRRLVVGYRKALN-CHLPAIIFVTKRNREVCTNPNDDWVQEYIK 89
+ +P L+ Y + + C P +IF+TK+ R C NP+D VQ ++
Sbjct: 61 RSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVR 107
>gi|4506841 small inducible cytokine A2 precursor [Homo sapiens]
Length = 99
Score = 52.0 bits (123), Expect = 1e-07
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 1 MKVSEAALSLLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGYRK--AL 58
MKVS A L LL++ +QP +N P TCC + + + + + YR+ +
Sbjct: 1 MKVSAALLCLLLIAATFIPQGLAQPDA---INAPVTCCYNFTNRKISVQRLASYRRITSS 57
Query: 59 NCHLPAIIFVTKRNREVCTNPNDDWVQE 86
C A+IF T +E+C +P WVQ+
Sbjct: 58 KCPKEAVIFKTIVAKEICADPKQKWVQD 85
>gi|4506827 small inducible cytokine A11 precursor [Homo sapiens]
Length = 97
Score = 52.0 bits (123), Expect = 1e-07
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 1 MKVSEAALSLLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGYRKALN- 59
MKVS A L LL++ + + P + P+TCC + +P + + YR+ +
Sbjct: 1 MKVSAALLWLLLIAAAFSPQGLAGP-----ASVPTTCCFNLANRKIPLQRLESYRRITSG 55
Query: 60 -CHLPAIIFVTKRNREVCTNPNDDWVQEYIK 89
C A+IF TK +++C +P WVQ+ +K
Sbjct: 56 KCPQKAVIFKTKLAKDICADPKKKWVQDSMK 86
>gi|22165427 small inducible cytokine A24 precursor [Homo sapiens]
Length = 119
Score = 50.4 bits (119), Expect = 3e-07
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 34 PSTCCLKYYEKVLPRRLVVGYRKALN--CHLPAIIFVTKRNREVCTNPNDDWVQEYIKD 90
PS CC+ + K +P VV Y+ + C +IF TK+ ++ C +P +WVQ Y+K+
Sbjct: 30 PSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTTKKGQQFCGDPKQEWVQRYMKN 88
>gi|194239688 chemokine (C-C motif) ligand 20 isoform 2 [Homo
sapiens]
Length = 95
Score = 49.3 bits (116), Expect = 7e-07
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 37 CCLKYYEKVLPRRLVVGYRKAL---NCHLPAIIFVTKRNREVCTNPNDDWVQEYIK 89
CCL Y +++L + +VG+ + L C + AIIF TK+ VC NP WV+ ++
Sbjct: 31 CCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIVR 86
>gi|4759076 chemokine (C-C motif) ligand 20 isoform 1 [Homo
sapiens]
Length = 96
Score = 49.3 bits (116), Expect = 7e-07
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 37 CCLKYYEKVLPRRLVVGYRKAL---NCHLPAIIFVTKRNREVCTNPNDDWVQEYIK 89
CCL Y +++L + +VG+ + L C + AIIF TK+ VC NP WV+ ++
Sbjct: 32 CCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIVR 87
>gi|5454040 small inducible cytokine A19 precursor [Homo sapiens]
Length = 98
Score = 47.4 bits (111), Expect = 3e-06
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 7 ALSLLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGYRKAL---NCHLP 63
ALSLLVL S N CCL +K +P +V + L C +P
Sbjct: 6 ALSLLVLWT-------SPAPTLSGTNDAEDCCLSVTQKPIPGYIVRNFHYLLIKDGCRVP 58
Query: 64 AIIFVTKRNREVCTNPNDDWVQEYIK 89
A++F T R R++C P+ WV+ I+
Sbjct: 59 AVVFTTLRGRQLCAPPDQPWVERIIQ 84
>gi|22538806 small inducible cytokine A23 isoform CKbeta8-1
precursor [Homo sapiens]
Length = 137
Score = 45.4 bits (106), Expect = 1e-05
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 33 TPSTCCLKYYEKVLPRRLVVGYRKALN-CHLPAIIFVTKRNREVCTNPNDDWVQEYIK 89
T + CC+ Y + +P L+ Y + + C P +IF+TK+ R C NP+D VQ ++
Sbjct: 67 TSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVR 124
>gi|22538804 small inducible cytokine A22 precursor [Homo sapiens]
Length = 93
Score = 43.9 bits (102), Expect = 3e-05
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 9 SLLVLILIITSASRSQPKVPEWVNTP-STCCLKYYEKVLPRRLVVG-YRKALNCHLPAII 66
+LLV+++++ A ++ P N S CC Y LP R+V Y + +C P ++
Sbjct: 7 ALLVVLVLLAVALQATEAGPYGANMEDSVCCRDYVRYRLPLRVVKHFYWTSDSCPRPGVV 66
Query: 67 FVTKRNREVCTNPNDDWVQ 85
+T R++E+C +P WV+
Sbjct: 67 LLTFRDKEICADPRVPWVK 85
>gi|10834988 chemokine (C-X-C motif) ligand 12 (stromal
cell-derived factor 1) isoform beta [Homo sapiens]
Length = 93
Score = 40.0 bits (92), Expect = 4e-04
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 10 LLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGYR--KALNCHLPAIIF 67
++VL+L++T+ S K V+ C +++E + R V + NC L +
Sbjct: 6 VVVLVLVLTALCLSDGKP---VSLSYRCPCRFFESHVARANVKHLKILNTPNCALQIVAR 62
Query: 68 VTKRNREVCTNPNDDWVQEYIK 89
+ NR+VC +P W+QEY++
Sbjct: 63 LKNNNRQVCIDPKLKWIQEYLE 84
>gi|76563933 chemokine (C-X-C motif) ligand 12 (stromal
cell-derived factor 1) isoform gamma [Homo sapiens]
Length = 119
Score = 40.0 bits (92), Expect = 4e-04
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 10 LLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGYR--KALNCHLPAIIF 67
++VL+L++T+ S K V+ C +++E + R V + NC L +
Sbjct: 6 VVVLVLVLTALCLSDGKP---VSLSYRCPCRFFESHVARANVKHLKILNTPNCALQIVAR 62
Query: 68 VTKRNREVCTNPNDDWVQEYIK 89
+ NR+VC +P W+QEY++
Sbjct: 63 LKNNNRQVCIDPKLKWIQEYLE 84
>gi|40316924 chemokine (C-X-C motif) ligand 12 (stromal
cell-derived factor 1) isoform alpha [Homo sapiens]
Length = 89
Score = 40.0 bits (92), Expect = 4e-04
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 10 LLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGYR--KALNCHLPAIIF 67
++VL+L++T+ S K V+ C +++E + R V + NC L +
Sbjct: 6 VVVLVLVLTALCLSDGKP---VSLSYRCPCRFFESHVARANVKHLKILNTPNCALQIVAR 62
Query: 68 VTKRNREVCTNPNDDWVQEYIK 89
+ NR+VC +P W+QEY++
Sbjct: 63 LKNNNRQVCIDPKLKWIQEYLE 84
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,517,104
Number of Sequences: 37866
Number of extensions: 184759
Number of successful extensions: 425
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 359
Number of HSP's gapped (non-prelim): 42
length of query: 120
length of database: 18,247,518
effective HSP length: 89
effective length of query: 31
effective length of database: 14,877,444
effective search space: 461200764
effective search space used: 461200764
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.