CCL20 30814

Name: CCL20	Sequence: fasta or formatted (96aa)		NCBI GI: 4759076
Description: chemokine (C-C motif) ligand 20 isoform 1		Referenced in: Chemokines and Their Receptors
Other entries for this name: alt prot [95aa] chemokine (C-C motif) ligand 20 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 7 2 C cysteine 7.3 7 2 D aspartate 3.1 3 1 E glutamate 3.1 3 1 F phenylalanine 4.2 4 1 G glycine 4.2 4 1 H histidine 3.1 3 1 I isoleucine 6.2 6 2 K lysine 10.4 10 3 L leucine 14.6 14 3 M methionine 3.1 3 1 N asparagine 5.2 5 1 P proline 2.1 2 1 Q glutamine 2.1 2 1 R arginine 3.1 3 1 S serine 6.2 6 1 T threonine 5.2 5 1 V valine 6.2 6 1 W tryptophan 1.0 1 1 Y tyrosine 2.1 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chemokine (C-C motif) ligand 20 isoform 1 CCL20 0.966 chemokine (C-C motif) ligand 20 isoform 2 CCL21 0.143 small inducible cytokine A21 precursor CCL16 0.137 small inducible cytokine A16 precursor CCL19 0.131 small inducible cytokine A19 precursor CCL18 0.126 small inducible cytokine A18 precursor CCL4L1 0.114 chemokine (C-C motif) ligand 4-like 1 precursor [Hom... CCL4L2 0.114 chemokine (C-C motif) ligand 4-like 2 precursor [Hom... CCL4 0.114 chemokine C-C motif ligand 4 isoform 1 precursor [Hom... CCL3 0.109 chemokine (C-C motif) ligand 3 CCL8 0.109 small inducible cytokine A8 precursor CCL26 0.103 chemokine (C-C motif) ligand 26 precursor XCL1 0.103 chemokine (C motif) ligand 1 XCL2 0.103 chemokine (C motif) ligand 2 CCL23 0.097 small inducible cytokine A23 isoform CKbeta8 precurs... CCL23 0.097 small inducible cytokine A23 isoform CKbeta8-1 precu... CCL2 0.091 small inducible cytokine A2 precursor CCL3L1 0.091 chemokine (C-C motif) ligand 3-like 1 precursor [Hom... CCL3L3 0.091 chemokine (C-C motif) ligand 3-like 3 precursor [Hom... CCL7 0.086 chemokine (C-C motif) ligand 7 precursor CCL5 0.080 small inducible cytokine A5 precursor CCL11 0.080 small inducible cytokine A11 precursor CCL24 0.074 small inducible cytokine A24 precursor IL8 0.074 interleukin 8 precursor CCL13 0.074 small inducible cytokine A13 precursor CCL14 0.069 chemokine (C-C motif) ligand 14 isoform 2 precursor ... CCL14 0.069 chemokine (C-C motif) ligand 14 isoform 1 precursor ... CCL17 0.040 small inducible cytokine A17 precursor CCL22 0.034 small inducible cytokine A22 precursor CCL25 0.034 small inducible cytokine A25 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.