CXCL12 27448

Name: CXCL12	Sequence: fasta or formatted (89aa)		NCBI GI: 40316924
Description: chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1) isoform alpha		Referenced in: Chemokines and Their Receptors
Other entries for this name: alt prot [93aa] chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1)... alt prot [119aa] chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1)...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 7 1 C cysteine 5.6 5 1 D aspartate 2.2 2 1 E glutamate 3.4 3 1 F phenylalanine 2.2 2 2 G glycine 1.1 1 1 H histidine 2.2 2 1 I isoleucine 4.5 4 1 K lysine 10.1 9 1 L leucine 14.6 13 1 M methionine 1.1 1 1 N asparagine 9.0 8 3 P proline 4.5 4 1 Q glutamine 3.4 3 1 R arginine 5.6 5 1 S serine 4.5 4 1 T threonine 2.2 2 1 V valine 12.4 11 4 W tryptophan 1.1 1 1 Y tyrosine 2.2 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chemokine (C-X-C motif) ligand 12 (stromal cell-deri... CXCL12 1.000 chemokine (C-X-C motif) ligand 12 (stromal cell-deri... CXCL12 1.000 chemokine (C-X-C motif) ligand 12 (stromal cell-deri... IL8 0.121 interleukin 8 precursor CCL5 0.115 small inducible cytokine A5 precursor CXCL3 0.115 chemokine (C-X-C motif) ligand 3 CXCL2 0.108 chemokine (C-X-C motif) ligand 2 CXCL1 0.096 chemokine (C-X-C motif) ligand 1 CCL16 0.096 small inducible cytokine A16 precursor CCL13 0.089 small inducible cytokine A13 precursor CCL7 0.083 chemokine (C-C motif) ligand 7 precursor CXCL6 0.076 chemokine (C-X-C motif) ligand 6 (granulocyte chemota... CXCL10 0.070 small inducible cytokine B10 precursor PPBP 0.064 pro-platelet basic protein precursor CCL18 0.064 small inducible cytokine A18 precursor CXCL5 0.057 chemokine (C-X-C motif) ligand 5 precursor CXCL13 0.057 chemokine (C-X-C motif) ligand 13 (B-cell chemoattrac... CXCL9 0.051 small inducible cytokine B9 precursor CCL22 0.045 small inducible cytokine A22 precursor CCL4L1 0.045 chemokine (C-C motif) ligand 4-like 1 precursor [Hom... CCL4L2 0.045 chemokine (C-C motif) ligand 4-like 2 precursor [Hom... CCL3 0.038 chemokine (C-C motif) ligand 3 CCL4 0.038 chemokine C-C motif ligand 4 isoform 1 precursor [Hom... CCL3L1 0.038 chemokine (C-C motif) ligand 3-like 1 precursor [Hom... CCL3L3 0.038 chemokine (C-C motif) ligand 3-like 3 precursor [Hom... CCL2 0.032 small inducible cytokine A2 precursor CXCL11 0.032 small inducible cytokine B11 precursor CCL24 0.032 small inducible cytokine A24 precursor CCL11 0.025 small inducible cytokine A11 precursor XCL2 0.025 chemokine (C motif) ligand 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.