Guide to the Human Genome
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Name: CCL14 Sequence: fasta or formatted (93aa) NCBI GI: 14589961
Description:

chemokine (C-C motif) ligand 14 isoform 1 precursor

Referenced in:

Chemokines and Their Receptors

Other entries for this name:
alt prot [109aa] chemokine (C-C motif) ligand 14 isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.2          3           2
 C cysteine            4.3          4           2
 D aspartate           4.3          4           1
 E glutamate           4.3          4           1
 F phenylalanine       4.3          4           2
 G glycine             4.3          4           1
 H histidine           2.2          2           1
 I isoleucine          9.7          9           1
 K lysine              8.6          8           1
 L leucine             3.2          3           2
 M methionine          3.2          3           1
 N asparagine          3.2          3           1
 P proline             6.5          6           1
 Q glutamine           3.2          3           1
 R arginine            4.3          4           1
 S serine              9.7          9           3
 T threonine           9.7          9           2
 V valine              4.3          4           1
 W tryptophan          1.1          1           1
 Y tyrosine            6.5          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chemokine (C-C motif) ligand 14 isoform 1 precursor ... 
CCL14                 0.931   chemokine (C-C motif) ligand 14 isoform 2 precursor ...
CCL3L1                0.416   chemokine (C-C motif) ligand 3-like 1 precursor [Hom...
CCL3L3                0.416   chemokine (C-C motif) ligand 3-like 3 precursor [Hom...
CCL3                  0.399   chemokine (C-C motif) ligand 3 
CCL4L1                0.387   chemokine (C-C motif) ligand 4-like 1 precursor [Hom...
CCL4L2                0.387   chemokine (C-C motif) ligand 4-like 2 precursor [Hom...
CCL4                  0.382   chemokine C-C motif ligand 4 isoform 1 precursor [Hom...
CCL18                 0.329   small inducible cytokine A18 precursor 
CCL23                 0.301   small inducible cytokine A23 isoform CKbeta8 precurs...
CCL5                  0.295   small inducible cytokine A5 precursor 
CCL23                 0.283   small inducible cytokine A23 isoform CKbeta8-1 precu...
CCL16                 0.272   small inducible cytokine A16 precursor 
CCL15                 0.272   chemokine (C-C motif) ligand 15 precursor 
CCL13                 0.266   small inducible cytokine A13 precursor 
CCL26                 0.237   chemokine (C-C motif) ligand 26 precursor 
CCL8                  0.220   small inducible cytokine A8 precursor 
CCL17                 0.214   small inducible cytokine A17 precursor 
CCL24                 0.202   small inducible cytokine A24 precursor 
CCL7                  0.202   chemokine (C-C motif) ligand 7 precursor 
CCL11                 0.191   small inducible cytokine A11 precursor 
CCL22                 0.185   small inducible cytokine A22 precursor 
CCL2                  0.156   small inducible cytokine A2 precursor 
CCL1                  0.150   small inducible cytokine A1 precursor 
XCL1                  0.127   chemokine (C motif) ligand 1 
XCL2                  0.127   chemokine (C motif) ligand 2 
CCL21                 0.104   small inducible cytokine A21 precursor 
CCL19                 0.098   small inducible cytokine A19 precursor 
CX3CL1                0.075   chemokine (C-X3-C motif) ligand 1 
CCL20                 0.069   chemokine (C-C motif) ligand 20 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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