CXCL12 194

Name: CXCL12	Sequence: fasta or formatted (93aa)		NCBI GI: 10834988
Description: chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1) isoform beta		Referenced in: Chemokines and Their Receptors
Other entries for this name: alt prot [89aa] chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1)... alt prot [119aa] chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1)...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 7 1 C cysteine 5.4 5 1 D aspartate 2.2 2 1 E glutamate 3.2 3 1 F phenylalanine 3.2 3 2 G glycine 1.1 1 1 H histidine 2.2 2 1 I isoleucine 4.3 4 1 K lysine 10.8 10 1 L leucine 14.0 13 1 M methionine 2.2 2 1 N asparagine 8.6 8 3 P proline 4.3 4 1 Q glutamine 3.2 3 1 R arginine 6.5 6 1 S serine 4.3 4 1 T threonine 2.2 2 1 V valine 11.8 11 4 W tryptophan 1.1 1 1 Y tyrosine 2.2 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chemokine (C-X-C motif) ligand 12 (stromal cell-deri... CXCL12 0.946 chemokine (C-X-C motif) ligand 12 (stromal cell-deri... CXCL12 0.946 chemokine (C-X-C motif) ligand 12 (stromal cell-deri... IL8 0.114 interleukin 8 precursor CCL5 0.108 small inducible cytokine A5 precursor CXCL3 0.108 chemokine (C-X-C motif) ligand 3 CXCL2 0.102 chemokine (C-X-C motif) ligand 2 CXCL1 0.090 chemokine (C-X-C motif) ligand 1 CCL16 0.090 small inducible cytokine A16 precursor CCL13 0.084 small inducible cytokine A13 precursor CCL7 0.084 chemokine (C-C motif) ligand 7 precursor CXCL10 0.072 small inducible cytokine B10 precursor CXCL6 0.072 chemokine (C-X-C motif) ligand 6 (granulocyte chemota... PPBP 0.060 pro-platelet basic protein precursor CCL18 0.060 small inducible cytokine A18 precursor CXCL13 0.060 chemokine (C-X-C motif) ligand 13 (B-cell chemoattrac... CXCL5 0.054 chemokine (C-X-C motif) ligand 5 precursor CXCL9 0.048 small inducible cytokine B9 precursor CCL22 0.042 small inducible cytokine A22 precursor CXCL11 0.042 small inducible cytokine B11 precursor CCL4L1 0.042 chemokine (C-C motif) ligand 4-like 1 precursor [Hom... CCL4L2 0.042 chemokine (C-C motif) ligand 4-like 2 precursor [Hom... CCL3 0.036 chemokine (C-C motif) ligand 3 CCL4 0.036 chemokine C-C motif ligand 4 isoform 1 precursor [Hom... CCL3L1 0.036 chemokine (C-C motif) ligand 3-like 1 precursor [Hom... CCL3L3 0.036 chemokine (C-C motif) ligand 3-like 3 precursor [Hom... CCL24 0.030 small inducible cytokine A24 precursor CCL2 0.030 small inducible cytokine A2 precursor CCL11 0.024 small inducible cytokine A11 precursor XCL2 0.024 chemokine (C motif) ligand 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.