CXCL12 35628

Name: CXCL12	Sequence: fasta or formatted (119aa)		NCBI GI: 76563933
Description: chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1) isoform gamma		Referenced in: Chemokines and Their Receptors
Other entries for this name: alt prot [93aa] chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1)... alt prot [89aa] chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1)...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 9 2 C cysteine 4.2 5 1 D aspartate 1.7 2 1 E glutamate 5.0 6 2 F phenylalanine 1.7 2 2 G glycine 3.4 4 1 H histidine 1.7 2 1 I isoleucine 4.2 5 1 K lysine 17.6 21 3 L leucine 10.9 13 1 M methionine 0.8 1 1 N asparagine 7.6 9 3 P proline 3.4 4 1 Q glutamine 4.2 5 1 R arginine 8.4 10 2 S serine 3.4 4 1 T threonine 1.7 2 1 V valine 10.1 12 4 W tryptophan 0.8 1 1 Y tyrosine 1.7 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chemokine (C-X-C motif) ligand 12 (stromal cell-deri... CXCL12 0.730 chemokine (C-X-C motif) ligand 12 (stromal cell-deri... CXCL12 0.730 chemokine (C-X-C motif) ligand 12 (stromal cell-deri... CXCL3 0.093 chemokine (C-X-C motif) ligand 3 CXCL2 0.093 chemokine (C-X-C motif) ligand 2 IL8 0.088 interleukin 8 precursor CXCL9 0.084 small inducible cytokine B9 precursor CCL5 0.084 small inducible cytokine A5 precursor CXCL1 0.070 chemokine (C-X-C motif) ligand 1 CXCL6 0.070 chemokine (C-X-C motif) ligand 6 (granulocyte chemota... CCL16 0.070 small inducible cytokine A16 precursor CCL13 0.065 small inducible cytokine A13 precursor CCL7 0.065 chemokine (C-C motif) ligand 7 precursor CXCL5 0.065 chemokine (C-X-C motif) ligand 5 precursor CXCL10 0.056 small inducible cytokine B10 precursor PPBP 0.047 pro-platelet basic protein precursor CCL18 0.047 small inducible cytokine A18 precursor LOC100294364 0.047 PREDICTED: hypothetical protein CXCL13 0.042 chemokine (C-X-C motif) ligand 13 (B-cell chemoattrac... LOC100133698 0.037 PREDICTED: hypothetical protein CCL22 0.033 small inducible cytokine A22 precursor PASD1 0.033 PAS domain containing 1 CCDC49 0.033 coiled-coil domain containing 49 CCL4L1 0.033 chemokine (C-C motif) ligand 4-like 1 precursor [Hom... CCL21 0.033 small inducible cytokine A21 precursor CCL4L2 0.033 chemokine (C-C motif) ligand 4-like 2 precursor [Hom... POU4F1 0.033 POU domain, class 4, transcription factor 1 PDGFA 0.033 platelet-derived growth factor alpha isoform 1 prepr... CCL3 0.028 chemokine (C-C motif) ligand 3 CCL4 0.028 chemokine C-C motif ligand 4 isoform 1 precursor [Hom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.