CCL20 10929

Name: CCL20	Sequence: fasta or formatted (95aa)		NCBI GI: 194239688
Description: chemokine (C-C motif) ligand 20 isoform 2		Referenced in: Chemokines and Their Receptors
Other entries for this name: alt prot [96aa] chemokine (C-C motif) ligand 20 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 6 2 C cysteine 7.4 7 2 D aspartate 3.2 3 1 E glutamate 3.2 3 1 F phenylalanine 4.2 4 1 G glycine 4.2 4 1 H histidine 3.2 3 1 I isoleucine 6.3 6 2 K lysine 10.5 10 3 L leucine 14.7 14 3 M methionine 3.2 3 1 N asparagine 5.3 5 1 P proline 2.1 2 1 Q glutamine 2.1 2 1 R arginine 3.2 3 1 S serine 6.3 6 1 T threonine 5.3 5 1 V valine 6.3 6 1 W tryptophan 1.1 1 1 Y tyrosine 2.1 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chemokine (C-C motif) ligand 20 isoform 2 CCL20 0.977 chemokine (C-C motif) ligand 20 isoform 1 CCL21 0.156 small inducible cytokine A21 precursor CCL16 0.139 small inducible cytokine A16 precursor CCL19 0.139 small inducible cytokine A19 precursor CCL4 0.110 chemokine C-C motif ligand 4 isoform 1 precursor [Hom... CCL4L1 0.110 chemokine (C-C motif) ligand 4-like 1 precursor [Hom... CCL4L2 0.110 chemokine (C-C motif) ligand 4-like 2 precursor [Hom... CCL26 0.110 chemokine (C-C motif) ligand 26 precursor XCL1 0.110 chemokine (C motif) ligand 1 XCL2 0.110 chemokine (C motif) ligand 2 CCL8 0.104 small inducible cytokine A8 precursor CCL3 0.104 chemokine (C-C motif) ligand 3 CCL23 0.104 small inducible cytokine A23 isoform CKbeta8 precurs... CCL18 0.104 small inducible cytokine A18 precursor CCL23 0.098 small inducible cytokine A23 isoform CKbeta8-1 precu... CCL5 0.098 small inducible cytokine A5 precursor CCL2 0.092 small inducible cytokine A2 precursor CCL3L1 0.092 chemokine (C-C motif) ligand 3-like 1 precursor [Hom... CCL3L3 0.092 chemokine (C-C motif) ligand 3-like 3 precursor [Hom... CCL7 0.087 chemokine (C-C motif) ligand 7 precursor CCL11 0.081 small inducible cytokine A11 precursor CCL24 0.081 small inducible cytokine A24 precursor CCL13 0.075 small inducible cytokine A13 precursor CCL14 0.069 chemokine (C-C motif) ligand 14 isoform 2 precursor ... CCL14 0.069 chemokine (C-C motif) ligand 14 isoform 1 precursor ... IL8 0.058 interleukin 8 precursor CCL22 0.040 small inducible cytokine A22 precursor CCL25 0.035 small inducible cytokine A25 precursor CX3CL1 0.035 chemokine (C-X3-C motif) ligand 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.