Guide to the Human Genome
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Name: CCL4L2 Sequence: fasta or formatted (92aa) NCBI GI: 46275832
Description:

chemokine (C-C motif) ligand 4-like 2 precursor

Referenced in:

Chemokines and Their Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7          8           2
 C cysteine            6.5          6           2
 D aspartate           4.3          4           1
 E glutamate           4.3          4           1
 F phenylalanine       4.3          4           1
 G glycine             2.2          2           1
 H histidine           0.0          0           0
 I isoleucine          0.0          0           0
 K lysine              4.3          4           1
 L leucine            12.0         11           2
 M methionine          2.2          2           1
 N asparagine          2.2          2           1
 P proline             6.5          6           2
 Q glutamine           4.3          4           1
 R arginine            3.3          3           1
 S serine             10.9         10           2
 T threonine           5.4          5           1
 V valine             12.0         11           2
 W tryptophan          1.1          1           1
 Y tyrosine            5.4          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chemokine (C-C motif) ligand 4-like 2 precursor [Hom... 
CCL4L1                1.000   chemokine (C-C motif) ligand 4-like 1 precursor [Hom...
CCL4                  0.958   chemokine C-C motif ligand 4 isoform 1 precursor [Hom...
CCL3L1                0.627   chemokine (C-C motif) ligand 3-like 1 precursor [Hom...
CCL3L3                0.627   chemokine (C-C motif) ligand 3-like 3 precursor [Hom...
CCL3                  0.554   chemokine (C-C motif) ligand 3 
CCL5                  0.416   small inducible cytokine A5 precursor 
CCL14                 0.404   chemokine (C-C motif) ligand 14 isoform 1 precursor ...
CCL14                 0.373   chemokine (C-C motif) ligand 14 isoform 2 precursor ...
CCL18                 0.373   small inducible cytokine A18 precursor 
CCL13                 0.349   small inducible cytokine A13 precursor 
CCL7                  0.313   chemokine (C-C motif) ligand 7 precursor 
CCL26                 0.313   chemokine (C-C motif) ligand 26 precursor 
CCL16                 0.301   small inducible cytokine A16 precursor 
CCL8                  0.289   small inducible cytokine A8 precursor 
CCL11                 0.277   small inducible cytokine A11 precursor 
CCL2                  0.265   small inducible cytokine A2 precursor 
CCL23                 0.253   small inducible cytokine A23 isoform CKbeta8 precurs...
CCL23                 0.241   small inducible cytokine A23 isoform CKbeta8-1 precu...
CCL15                 0.241   chemokine (C-C motif) ligand 15 precursor 
CCL24                 0.229   small inducible cytokine A24 precursor 
CCL22                 0.199   small inducible cytokine A22 precursor 
CCL1                  0.199   small inducible cytokine A1 precursor 
CCL21                 0.193   small inducible cytokine A21 precursor 
CCL17                 0.151   small inducible cytokine A17 precursor 
CCL19                 0.151   small inducible cytokine A19 precursor 
CX3CL1                0.139   chemokine (C-X3-C motif) ligand 1 
XCL1                  0.133   chemokine (C motif) ligand 1 
XCL2                  0.127   chemokine (C motif) ligand 2 
CCL20                 0.120   chemokine (C-C motif) ligand 20 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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