Guide to the Human Genome
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Name: C1QTNF3 Sequence: fasta or formatted (319aa) NCBI GI: 62739183
Description:

C1q and tumor necrosis factor related protein 3 isoform b

Referenced in:

Collagen
Complement

Other entries for this name:
alt prot [246aa] C1q and tumor necrosis factor related protein 3 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         13           1
 C cysteine            1.6          5           2
 D aspartate           4.7         15           2
 E glutamate           5.6         18           2
 F phenylalanine       6.0         19           2
 G glycine            12.9         41           2
 H histidine           4.1         13           1
 I isoleucine          2.8          9           2
 K lysine              5.0         16           1
 L leucine             6.9         22           2
 M methionine          3.1         10           2
 N asparagine          5.0         16           2
 P proline             6.6         21           2
 Q glutamine           4.4         14           2
 R arginine            4.7         15           2
 S serine              7.2         23           2
 T threonine           5.6         18           2
 V valine              5.3         17           2
 W tryptophan          1.3          4           1
 Y tyrosine            3.1         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   C1q and tumor necrosis factor related protein 3 isof... 
C1QTNF3               0.681   C1q and tumor necrosis factor related protein 3 isof...
C1QL1                 0.132   complement component 1, q subcomponent-like 1 
C1QTNF2               0.130   C1q and tumor necrosis factor related protein 2 [Hom...
C1QL3                 0.129   complement component 1, q subcomponent-like 3 
C1QL2                 0.129   complement component 1, q subcomponent-like 2 [Homo...
ADIPOQ                0.127   adiponectin precursor 
C1QTNF7               0.126   C1q and tumor necrosis factor related protein 7 isof...
C1QTNF7               0.126   C1q and tumor necrosis factor related protein 7 iso...
C1QTNF7               0.126   C1q and tumor necrosis factor related protein 7 iso...
C1QL4                 0.126   complement component 1, q subcomponent-like 4 
C1QTNF9               0.124   C1q and tumor necrosis factor related protein 9 [Hom...
CAPRIN2               0.123   C1q domain containing 1 isoform 1 
CAPRIN2               0.123   C1q domain containing 1 isoform 3 
CAPRIN2               0.123   C1q domain containing 1 isoform 2 
C1QTNF9B              0.120   C1q and tumor necrosis factor related protein 9B [Ho...
C1QTNF5               0.115   C1q and tumor necrosis factor related protein 5 prec...
C1QTNF6               0.112   C1q and tumor necrosis factor related protein 6 [Hom...
C1QTNF6               0.112   C1q and tumor necrosis factor related protein 6 [Hom...
COL10A1               0.110   type X collagen alpha 1 precursor 
C1QC                  0.106   complement component 1, q subcomponent, C chain prec...
C1QC                  0.106   complement component 1, q subcomponent, C chain pre...
C1QB                  0.103   complement component 1, q subcomponent, B chain prec...
OTOL1                 0.103   hypothetical protein LOC131149 
COL8A1                0.101   alpha 1 type VIII collagen precursor 
COL8A1                0.101   alpha 1 type VIII collagen precursor 
COL8A2                0.097   collagen, type VIII, alpha 2 
C1QA                  0.092   complement component 1, q subcomponent, A chain precu...
COL7A1                0.084   alpha 1 type VII collagen precursor 
EMILIN1               0.083   elastin microfibril interfacer 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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