TOP3B 29606

Name: TOP3B	Sequence: fasta or formatted (862aa)		NCBI GI: 4507635
Description: topoisomerase (DNA) III beta		Referenced in: Replication Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 57 2 C cysteine 3.9 34 1 D aspartate 5.2 45 2 E glutamate 6.1 53 2 F phenylalanine 3.9 34 1 G glycine 7.0 60 2 H histidine 3.5 30 1 I isoleucine 3.5 30 1 K lysine 6.8 59 2 L leucine 8.9 77 3 M methionine 2.9 25 1 N asparagine 3.2 28 2 P proline 6.0 52 2 Q glutamine 3.8 33 2 R arginine 5.8 50 2 S serine 6.3 54 3 T threonine 5.7 49 2 V valine 6.5 56 2 W tryptophan 1.0 9 1 Y tyrosine 3.1 27 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 topoisomerase (DNA) III beta TOP3A 0.211 topoisomerase (DNA) III alpha ZNF579 0.005 zinc finger protein 579 TRIP6 0.005 thyroid receptor-interacting protein 6 WDR33 0.004 WD repeat domain 33 isoform 1 LOC338758 0.004 PREDICTED: hypothetical protein LOC338758 0.004 PREDICTED: hypothetical protein LOC338758 0.004 PREDICTED: hypothetical protein BAT2D1 0.004 HBxAg transactivated protein 2 ANAPC7 0.003 anaphase-promoting complex subunit 7 isoform b [Hom... ANAPC7 0.003 anaphase-promoting complex subunit 7 isoform a [Hom... FLJ37078 0.003 hypothetical protein LOC222183 COL25A1 0.003 collagen, type XXV, alpha 1 isoform 1 COL25A1 0.003 collagen, type XXV, alpha 1 isoform 2 C1QL4 0.003 complement component 1, q subcomponent-like 4 MLL2 0.003 myeloid/lymphoid or mixed-lineage leukemia 2 COL6A2 0.003 alpha 2 type VI collagen isoform 2C2a' precursor [H... COL6A2 0.003 alpha 2 type VI collagen isoform 2C2a precursor [Ho... COL6A2 0.003 alpha 2 type VI collagen isoform 2C2 precursor [Hom... SDK1 0.003 sidekick 1 COLEC12 0.003 collectin sub-family member 12 COL11A2 0.003 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.003 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.003 collagen, type XI, alpha 2 isoform 1 preproprotein ... BAT2 0.003 HLA-B associated transcript-2 LENG8 0.003 leukocyte receptor cluster member 8 HMGA2 0.003 high mobility group AT-hook 2 isoform b HMGA2 0.003 high mobility group AT-hook 2 isoform a COL19A1 0.003 alpha 1 type XIX collagen precursor COL5A3 0.003 collagen, type V, alpha 3 preproprotein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.