Guide to the Human Genome
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Name: ANAPC7 Sequence: fasta or formatted (599aa) NCBI GI: 212549736
Description:

anaphase-promoting complex subunit 7 isoform a

Referenced in:

Anaphase-promoting Complex
Tetratricopeptide Domains

Other entries for this name:
alt prot [537aa] anaphase-promoting complex subunit 7 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         58           3
 C cysteine            1.8         11           1
 D aspartate           6.2         37           2
 E glutamate           6.7         40           2
 F phenylalanine       1.8         11           1
 G glycine             4.7         28           1
 H histidine           1.5          9           1
 I isoleucine          4.2         25           2
 K lysine              6.0         36           2
 L leucine            13.2         79           3
 M methionine          3.5         21           2
 N asparagine          4.7         28           3
 P proline             3.7         22           2
 Q glutamine           5.3         32           2
 R arginine            4.8         29           1
 S serine              8.2         49           2
 T threonine           3.5         21           1
 V valine              5.7         34           2
 W tryptophan          0.8          5           1
 Y tyrosine            4.0         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   anaphase-promoting complex subunit 7 isoform a [Hom... 
ANAPC7                0.888   anaphase-promoting complex subunit 7 isoform b [Hom...
CDC27                 0.037   cell division cycle protein 27 isoform 1 
CDC27                 0.037   cell division cycle protein 27 isoform 2 
TMTC1                 0.033   transmembrane and tetratricopeptide repeat containin...
OGT                   0.025   O-linked GlcNAc transferase isoform 2 
OGT                   0.025   O-linked GlcNAc transferase isoform 1 
CDC23                 0.018   cell division cycle protein 23 
TTC21B                0.017   tetratricopeptide repeat domain 21B 
TOMM70A               0.017   translocase of outer mitochondrial membrane 70 homol...
TTC13                 0.017   tetratricopeptide repeat domain 13 isoform a 
TTC13                 0.016   tetratricopeptide repeat domain 13 isoform b 
TMTC3                 0.016   transmembrane and tetratricopeptide repeat containi...
TMTC4                 0.013   transmembrane and tetratricopeptide repeat containi...
TMTC4                 0.013   transmembrane and tetratricopeptide repeat containi...
TTC7A                 0.010   tetratricopeptide repeat domain 7A 
CTR9                  0.010   SH2 domain binding protein 1 
DAXX                  0.010   death-domain associated protein isoform a 
DAXX                  0.010   death-domain associated protein isoform a 
DAXX                  0.010   death-domain associated protein isoform b 
LOC647020             0.010   PREDICTED: similar to acidic (leucine-rich) nuclear...
LOC647020             0.010   PREDICTED: similar to acidic (leucine-rich) nuclear...
DNAJC7                0.010   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
DNAJC7                0.010   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
ZSCAN12               0.009   zinc finger and SCAN domain containing 12 
DNAJC3                0.009   DnaJ (Hsp40) homolog, subfamily C, member 3 
STIP1                 0.009   stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...
ZC3H7B                0.009   zinc finger CCCH-type containing 7B 
PDCD11                0.009   programmed cell death 11 
EVC2                  0.009   limbin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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