TOP3A 237

Name: TOP3A	Sequence: fasta or formatted (1001aa)		NCBI GI: 10835218
Description: topoisomerase (DNA) III alpha		Referenced in: Replication Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.2 72 2 C cysteine 3.4 34 2 D aspartate 5.0 50 2 E glutamate 6.4 64 1 F phenylalanine 4.4 44 2 G glycine 7.2 72 2 H histidine 2.6 26 1 I isoleucine 3.9 39 2 K lysine 5.7 57 2 L leucine 8.5 85 2 M methionine 2.2 22 1 N asparagine 3.5 35 2 P proline 7.0 70 3 Q glutamine 5.5 55 2 R arginine 7.3 73 3 S serine 5.7 57 3 T threonine 5.2 52 2 V valine 5.8 58 2 W tryptophan 1.1 11 1 Y tyrosine 2.5 25 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 topoisomerase (DNA) III alpha TOP3B 0.182 topoisomerase (DNA) III beta NEIL3 0.017 nei endonuclease VIII-like 3 APEX2 0.010 apurinic/apyrimidinic endonuclease 2 COL3A1 0.007 collagen type III alpha 1 preproprotein ERI2 0.007 exoribonuclease 2 isoform 1 SPOCD1 0.006 SPOC domain containing 1 FOXI3 0.006 forkhead box I3 KIAA1853 0.005 KIAA1853 protein BSN 0.005 bassoon protein COL4A5 0.005 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.005 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.005 type IV collagen alpha 5 isoform 3 precursor COL5A3 0.005 collagen, type V, alpha 3 preproprotein C14orf4 0.004 chromosome 14 open reading frame 4 COL1A2 0.004 alpha 2 type I collagen SNRPB 0.004 small nuclear ribonucleoprotein polypeptide B/B' iso... SNRPB 0.004 small nuclear ribonucleoprotein polypeptide B/B' isof... COL4A3 0.004 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.004 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.004 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.004 alpha 3 type IV collagen isoform 1 precursor COL15A1 0.004 alpha 1 type XV collagen precursor CHRM1 0.004 cholinergic receptor, muscarinic 1 SALL3 0.004 sal-like 3 SLC12A9 0.003 solute carrier family 12 (potassium/chloride transpo... TTF2 0.003 transcription termination factor, RNA polymerase II ... MEX3D 0.003 ring finger and KH domain containing 1 CNOT3 0.003 CCR4-NOT transcription complex, subunit 3 TSC22D2 0.003 TSC22 domain family, member 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.