Guide to the Human Genome
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Name: ANAPC7 Sequence: fasta or formatted (537aa) NCBI GI: 212549738
Description:

anaphase-promoting complex subunit 7 isoform b

Referenced in:

Anaphase-promoting Complex
Tetratricopeptide Domains

Other entries for this name:
alt prot [599aa] anaphase-promoting complex subunit 7 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         54           3
 C cysteine            2.0         11           1
 D aspartate           5.2         28           1
 E glutamate           5.2         28           1
 F phenylalanine       1.9         10           1
 G glycine             4.1         22           1
 H histidine           1.7          9           1
 I isoleucine          4.7         25           2
 K lysine              6.1         33           2
 L leucine            14.2         76           3
 M methionine          3.2         17           2
 N asparagine          5.0         27           3
 P proline             3.7         20           2
 Q glutamine           4.7         25           2
 R arginine            5.6         30           1
 S serine              8.0         43           2
 T threonine           3.5         19           1
 V valine              6.1         33           2
 W tryptophan          0.6          3           1
 Y tyrosine            4.5         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   anaphase-promoting complex subunit 7 isoform b [Hom... 
ANAPC7                0.998   anaphase-promoting complex subunit 7 isoform a [Hom...
CDC27                 0.029   cell division cycle protein 27 isoform 1 
CDC27                 0.029   cell division cycle protein 27 isoform 2 
TMTC1                 0.027   transmembrane and tetratricopeptide repeat containin...
OGT                   0.026   O-linked GlcNAc transferase isoform 2 
OGT                   0.026   O-linked GlcNAc transferase isoform 1 
CDC23                 0.020   cell division cycle protein 23 
TTC21B                0.019   tetratricopeptide repeat domain 21B 
TTC13                 0.019   tetratricopeptide repeat domain 13 isoform a 
TTC13                 0.018   tetratricopeptide repeat domain 13 isoform b 
TOMM70A               0.017   translocase of outer mitochondrial membrane 70 homol...
TMTC3                 0.012   transmembrane and tetratricopeptide repeat containi...
DNAJC7                0.011   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
DNAJC7                0.011   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
DNAJC3                0.010   DnaJ (Hsp40) homolog, subfamily C, member 3 
STIP1                 0.010   stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...
ZC3H7B                0.010   zinc finger CCCH-type containing 7B 
PDCD11                0.010   programmed cell death 11 
TTC7A                 0.010   tetratricopeptide repeat domain 7A 
DIP2A                 0.009   disco-interacting protein 2A isoform g 
DIP2A                 0.009   disco-interacting protein 2A isoform a 
DIP2A                 0.009   disco-interacting protein 2A isoform f 
DIP2A                 0.009   disco-interacting protein 2A isoform e 
DIP2A                 0.009   disco-interacting protein 2A isoform d 
DIP2A                 0.009   disco-interacting protein 2A isoform c 
DIP2A                 0.009   disco-interacting protein 2A isoform b 
UNC45A                0.009   smooth muscle cell associated protein-1 isoform 3 [H...
UNC45A                0.009   smooth muscle cell associated protein-1 isoform 2 [H...
TMTC4                 0.009   transmembrane and tetratricopeptide repeat containi...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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