TRIP6 37253

Name: TRIP6	Sequence: fasta or formatted (476aa)		NCBI GI: 91208423
Description: thyroid receptor-interacting protein 6		Referenced in: LIM Domain Proteins Thyroid and Thyroid Hormone Receptor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.0 43 2 C cysteine 5.5 26 1 D aspartate 3.8 18 1 E glutamate 5.7 27 2 F phenylalanine 2.5 12 1 G glycine 13.0 62 2 H histidine 3.6 17 1 I isoleucine 2.5 12 1 K lysine 2.3 11 2 L leucine 6.7 32 3 M methionine 0.8 4 1 N asparagine 0.8 4 1 P proline 12.8 61 5 Q glutamine 4.6 22 1 R arginine 7.1 34 2 S serine 5.7 27 2 T threonine 4.2 20 2 V valine 5.7 27 2 W tryptophan 0.8 4 1 Y tyrosine 2.7 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 thyroid receptor-interacting protein 6 LPP 0.380 LIM domain containing preferred translocation partner... ZYX 0.267 zyxin ZYX 0.267 zyxin JUB 0.198 ajuba isoform 1 LIMD1 0.197 LIM domains containing 1 WTIP 0.197 Wilms tumor 1 interacting protein FBLIM1 0.171 filamin-binding LIM protein-1 isoform a FBLIM1 0.166 filamin-binding LIM protein-1 isoform c JUB 0.124 ajuba isoform 2 FBLIM1 0.100 filamin-binding LIM protein-1 isoform b LDB3 0.076 LIM domain binding 3 isoform 2 LDB3 0.076 LIM domain binding 3 isoform 1 PXN 0.075 paxillin isoform 2 PXN 0.075 paxillin isoform 1 PXN 0.072 paxillin isoform 3 TGFB1I1 0.070 transforming growth factor beta 1 induced transcrip... TGFB1I1 0.070 transforming growth factor beta 1 induced transcript... ABLIM2 0.065 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.065 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.065 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.065 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.065 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.065 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.065 actin binding LIM protein family, member 2 isoform ... ABLIM1 0.064 actin-binding LIM protein 1 isoform c ABLIM1 0.064 actin-binding LIM protein 1 isoform b ABLIM1 0.063 actin-binding LIM protein 1 isoform a FHL3 0.062 four and a half LIM domains 3 LPXN 0.057 leupaxin isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.