Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 4502769
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4502769 CCAAT/enhancer binding protein gamma [Homo sapiens]
(150 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4502769 CCAAT/enhancer binding protein gamma [Homo sapiens] 293 3e-80
gi|28872796 CCAAT/enhancer binding protein beta [Homo sapiens] 79 1e-15
gi|28872794 CCAAT/enhancer binding protein alpha [Homo sapiens] 77 7e-15
gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens] 71 3e-13
gi|28872800 CCAAT/enhancer binding protein epsilon [Homo sapiens] 70 9e-13
gi|8924246 basic leucine zipper transcription factor, ATF-like 3... 50 5e-07
gi|166999613 FBJ murine osteosarcoma viral oncogene homolog B is... 48 3e-06
gi|194239643 activating transcription factor 7 isoform 3 [Homo s... 48 3e-06
gi|5802980 activating transcription factor 7 isoform 2 [Homo sap... 48 3e-06
gi|194239640 activating transcription factor 7 isoform 1 [Homo s... 48 3e-06
gi|4504421 hepatic leukemia factor [Homo sapiens] 46 1e-05
gi|21361118 DNA-damage-inducible transcript 3 [Homo sapiens] 45 2e-05
gi|22538422 activating transcription factor 2 [Homo sapiens] 44 5e-05
gi|5453563 basic leucine zipper transcription factor, ATF-like [... 44 5e-05
gi|4885241 v-fos FBJ murine osteosarcoma viral oncogene homolog ... 44 7e-05
gi|14195601 protein phosphatase 1, regulatory (inhibitor) subuni... 42 3e-04
gi|14195599 protein phosphatase 1, regulatory (inhibitor) subuni... 42 3e-04
gi|223972670 thyrotrophic embryonic factor isoform 2 [Homo sapiens] 40 7e-04
gi|4507431 thyrotrophic embryonic factor isoform 1 [Homo sapiens] 40 7e-04
gi|4885245 FOS-like antigen 2 [Homo sapiens] 39 0.002
gi|88900495 HCF-binding transcription factor Zhangfei [Homo sapi... 39 0.002
gi|55770834 centromere protein F [Homo sapiens] 39 0.002
gi|239751641 PREDICTED: hypothetical protein XP_002347943 [Homo ... 37 0.005
gi|192807309 TNFAIP3 interacting protein 3 [Homo sapiens] 37 0.006
gi|192807305 TNFAIP3 interacting protein 3 [Homo sapiens] 37 0.006
gi|31542493 D site of albumin promoter (albumin D-box) binding p... 37 0.008
gi|4502263 activating transcription factor 3 isoform 1 [Homo sap... 36 0.011
gi|71902536 activating transcription factor 3 isoform 1 [Homo sa... 36 0.011
gi|102469037 jun D proto-oncogene [Homo sapiens] 36 0.014
gi|205277421 Jun dimerization protein 2 isoform b [Homo sapiens] 36 0.014
>gi|4502769 CCAAT/enhancer binding protein gamma [Homo sapiens]
Length = 150
Score = 293 bits (751), Expect = 3e-80
Identities = 150/150 (100%), Positives = 150/150 (100%)
Query: 1 MSKISQQNSTPGVNGISVIHTQAHASGLQQVPQLVPAGPGGGGKAVAPSKQSKKSSPMDR 60
MSKISQQNSTPGVNGISVIHTQAHASGLQQVPQLVPAGPGGGGKAVAPSKQSKKSSPMDR
Sbjct: 1 MSKISQQNSTPGVNGISVIHTQAHASGLQQVPQLVPAGPGGGGKAVAPSKQSKKSSPMDR 60
Query: 61 NSDEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKIKLLTKELSVLKD 120
NSDEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKIKLLTKELSVLKD
Sbjct: 61 NSDEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKIKLLTKELSVLKD 120
Query: 121 LFLEHAHNLADNVQSISTENTTADGDNAGQ 150
LFLEHAHNLADNVQSISTENTTADGDNAGQ
Sbjct: 121 LFLEHAHNLADNVQSISTENTTADGDNAGQ 150
>gi|28872796 CCAAT/enhancer binding protein beta [Homo sapiens]
Length = 345
Score = 79.3 bits (194), Expect = 1e-15
Identities = 41/81 (50%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Query: 43 GKAVAPSK-QSKKSSPMDRNSDEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEEN 101
G A APS+ +SK +D++SDEY+ RRERNN+AV+KSR K+K + +T +V +L EN
Sbjct: 251 GAAPAPSQVKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAEN 310
Query: 102 ERLEAKIKLLTKELSVLKDLF 122
ERL+ K++ L++ELS L++LF
Sbjct: 311 ERLQKKVEQLSRELSTLRNLF 331
>gi|28872794 CCAAT/enhancer binding protein alpha [Homo sapiens]
Length = 358
Score = 76.6 bits (187), Expect = 7e-15
Identities = 42/91 (46%), Positives = 62/91 (68%), Gaps = 9/91 (9%)
Query: 32 PQLVPAGPGGGGKAVAPSKQSKKSSPMDRNSDEYRQRRERNNMAVKKSRLKSKQKAQDTL 91
P L +G G GKA KKS +D+NS+EYR RRERNN+AV+KSR K+KQ+ +T
Sbjct: 261 PDLRASGGSGAGKA-------KKS--VDKNSNEYRVRRERNNIAVRKSRDKAKQRNVETQ 311
Query: 92 QRVNQLKEENERLEAKIKLLTKELSVLKDLF 122
Q+V +L +N+RL +++ L++EL L+ +F
Sbjct: 312 QKVLELTSDNDRLRKRVEQLSRELDTLRGIF 342
>gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens]
Length = 269
Score = 71.2 bits (173), Expect = 3e-13
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 4/102 (3%)
Query: 25 ASGLQQVPQLVPAGPGGGGKAV-APSKQSKKSSPM---DRNSDEYRQRRERNNMAVKKSR 80
A+ Q P P P + AP +KS+ DR S EYRQRRERNN+AV+KSR
Sbjct: 150 AAAGQPTPPTSPEPPRSSPRQTPAPGPAREKSAGKRGPDRGSPEYRQRRERNNIAVRKSR 209
Query: 81 LKSKQKAQDTLQRVNQLKEENERLEAKIKLLTKELSVLKDLF 122
K+K++ Q+ Q++ +L ENE+L +++ LT++L+ L+ F
Sbjct: 210 DKAKRRNQEMQQKLVELSAENEKLHQRVEQLTRDLAGLRQFF 251
>gi|28872800 CCAAT/enhancer binding protein epsilon [Homo sapiens]
Length = 281
Score = 69.7 bits (169), Expect = 9e-13
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 13/104 (12%)
Query: 36 PAGPGGGGKAVAPSKQSKKSSPMDRNSDEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVN 95
PAGP GK ++++S EYR RRERNN+AV+KSR K+K++ +T Q+V
Sbjct: 189 PAGPLHKGKKA-----------VNKDSLEYRLRRERNNIAVRKSRDKAKRRILETQQKVL 237
Query: 96 QLKEENERLEAKIKLLTKELSVLKDLF--LEHAHNLADNVQSIS 137
+ ENERL ++++ LT+EL L++LF + A NL V S
Sbjct: 238 EYMAENERLRSRVEQLTQELDTLRNLFRQIPEAANLIKGVGGCS 281
>gi|8924246 basic leucine zipper transcription factor, ATF-like 3
[Homo sapiens]
Length = 127
Score = 50.4 bits (119), Expect = 5e-07
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 48 PSKQSKKSSPMDRNSDEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAK 107
P Q ++ SP D D +RRE+N +A ++SR K QKA + L++EN L +
Sbjct: 23 PQPQPQQQSPED--DDRKVRRREKNRVAAQRSRKKQTQKADKLHEEYESLEQENTMLRRE 80
Query: 108 IKLLTKELSVLKDLFLEH 125
I LT+EL L + EH
Sbjct: 81 IGKLTEELKHLTEALKEH 98
>gi|166999613 FBJ murine osteosarcoma viral oncogene homolog B
isoform 1 [Homo sapiens]
Length = 338
Score = 48.1 bits (113), Expect = 3e-06
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 9 STPGVNGISVIHTQAHASGLQQVPQLVPAGPGGGGKAVAPSKQSKKSSPMDRNSDEYRQR 68
STPG++G S A SG +GPG A A ++ ++ + ++ R R
Sbjct: 105 STPGMSGYS--SGGASGSGGPSTSGTT-SGPGPARPARARPRRPREETLTPEEEEKRRVR 161
Query: 69 RERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKIKLLTKELSVLKDLFLEH 125
RERN +A K R + ++ +QL+EE LE++I L KE L+ + + H
Sbjct: 162 RERNKLAAAKCRNRRRELTDRLQAETDQLEEEKAELESEIAELQKEKERLEFVLVAH 218
>gi|194239643 activating transcription factor 7 isoform 3 [Homo
sapiens]
Length = 462
Score = 48.1 bits (113), Expect = 3e-06
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 32 PQLVPAGPGGGGKAVAPSKQSKKSSPMDRNSDEYRQR-RERNNMAVKKSRLKSKQKAQDT 90
PQ+ PA P PS ++ +D + DE RQR ERN A + R K K
Sbjct: 287 PQVSPAQP-------TPSTGGRRRRTVDEDPDERRQRFLERNRAAASRCRQKRKLWVSSL 339
Query: 91 LQRVNQLKEENERLEAKIKLLTKELSVLKDLFLEH 125
++ +L +N +L ++ LL E++ LK L L H
Sbjct: 340 EKKAEELTSQNIQLSNEVTLLRNEVAQLKQLLLAH 374
>gi|5802980 activating transcription factor 7 isoform 2 [Homo
sapiens]
Length = 483
Score = 48.1 bits (113), Expect = 3e-06
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 32 PQLVPAGPGGGGKAVAPSKQSKKSSPMDRNSDEYRQR-RERNNMAVKKSRLKSKQKAQDT 90
PQ+ PA P PS ++ +D + DE RQR ERN A + R K K
Sbjct: 308 PQVSPAQP-------TPSTGGRRRRTVDEDPDERRQRFLERNRAAASRCRQKRKLWVSSL 360
Query: 91 LQRVNQLKEENERLEAKIKLLTKELSVLKDLFLEH 125
++ +L +N +L ++ LL E++ LK L L H
Sbjct: 361 EKKAEELTSQNIQLSNEVTLLRNEVAQLKQLLLAH 395
>gi|194239640 activating transcription factor 7 isoform 1 [Homo
sapiens]
Length = 494
Score = 48.1 bits (113), Expect = 3e-06
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 32 PQLVPAGPGGGGKAVAPSKQSKKSSPMDRNSDEYRQR-RERNNMAVKKSRLKSKQKAQDT 90
PQ+ PA P PS ++ +D + DE RQR ERN A + R K K
Sbjct: 319 PQVSPAQP-------TPSTGGRRRRTVDEDPDERRQRFLERNRAAASRCRQKRKLWVSSL 371
Query: 91 LQRVNQLKEENERLEAKIKLLTKELSVLKDLFLEH 125
++ +L +N +L ++ LL E++ LK L L H
Sbjct: 372 EKKAEELTSQNIQLSNEVTLLRNEVAQLKQLLLAH 406
>gi|4504421 hepatic leukemia factor [Homo sapiens]
Length = 295
Score = 45.8 bits (107), Expect = 1e-05
Identities = 26/76 (34%), Positives = 39/76 (51%)
Query: 50 KQSKKSSPMDRNSDEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKIK 109
K K P D D+Y RR +NNMA K+SR + K R + L++EN L ++
Sbjct: 213 KARKVFIPDDLKDDKYWARRRKNNMAAKRSRDARRLKENQIAIRASFLEKENSALRQEVA 272
Query: 110 LLTKELSVLKDLFLEH 125
L KEL K++ ++
Sbjct: 273 DLRKELGKCKNILAKY 288
>gi|21361118 DNA-damage-inducible transcript 3 [Homo sapiens]
Length = 169
Score = 45.1 bits (105), Expect = 2e-05
Identities = 22/81 (27%), Positives = 44/81 (54%)
Query: 49 SKQSKKSSPMDRNSDEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKI 108
S+ S + + R+R++ + + + + K+K Q+ ++V QL EENERL+ +I
Sbjct: 86 SQSSLAQEEEEEDQGRTRKRKQSGHSPARAGKQRMKEKEQENERKVAQLAEENERLKQEI 145
Query: 109 KLLTKELSVLKDLFLEHAHNL 129
+ LT+E+ + ++ NL
Sbjct: 146 ERLTREVEATRRALIDRMVNL 166
>gi|22538422 activating transcription factor 2 [Homo sapiens]
Length = 505
Score = 43.9 bits (102), Expect = 5e-05
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 7/143 (4%)
Query: 14 NGISVIHTQAHASGLQQVPQLVPAGPGGGGKAVAPSKQSKKSSPMDR---NSDEYRQRR- 69
+G ++ TQ+ S Q + Q + + Q++ +S R N D +RR
Sbjct: 298 HGSGLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQTQSTSGRRRRAANEDPDEKRRK 357
Query: 70 --ERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKIKLLTKELSVLKDLFLEHAH 127
ERN A + R K K Q ++ L N +L++++ LL E++ LK L L H
Sbjct: 358 FLERNRAAASRCRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLLLAHKD 417
Query: 128 NLADNVQSISTENTTADGDNAGQ 150
+Q S + TAD D++ +
Sbjct: 418 CPVTAMQKKSGYH-TADKDDSSE 439
>gi|5453563 basic leucine zipper transcription factor, ATF-like
[Homo sapiens]
Length = 125
Score = 43.9 bits (102), Expect = 5e-05
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 61 NSDEYR--QRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKIKLLTKELSVL 118
+SD+ R QRRE+N +A +KSR + QKA L+++N L +IK LT+EL
Sbjct: 23 SSDDVRRVQRREKNRIAAQKSRQRQTQKADTLHLESEDLEKQNAALRKEIKQLTEELKYF 82
Query: 119 KDLFLEH 125
+ H
Sbjct: 83 TSVLNSH 89
>gi|4885241 v-fos FBJ murine osteosarcoma viral oncogene homolog
[Homo sapiens]
Length = 380
Score = 43.5 bits (101), Expect = 7e-05
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 42 GGKAVAPSKQSKKSSPMDRNSDEYRQRRERNNMAVKKSRLKSKQKAQDTLQ-RVNQLKEE 100
GG+A + ++ K ++ R RRERN MA K R +++ DTLQ +QL++E
Sbjct: 117 GGRAQSIGRRGKVEQLSPEEEEKRRIRRERNKMAAAKCR-NRRRELTDTLQAETDQLEDE 175
Query: 101 NERLEAKIKLLTKELSVLKDLFLEH 125
L+ +I L KE L+ + H
Sbjct: 176 KSALQTEIANLLKEKEKLEFILAAH 200
>gi|14195601 protein phosphatase 1, regulatory (inhibitor) subunit
12B isoform b [Homo sapiens]
Length = 998
Score = 41.6 bits (96), Expect = 3e-04
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 46 VAPSKQSKKSSPMDRNSDEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLE 105
VA KQ K S DR+S ++RER + K S ++ + K L+++ LK+ NE+L+
Sbjct: 917 VAQQKQEKTS---DRSSVLEMEKRERRALERKMSEMEEEMKNLHQLKQIQTLKQMNEQLQ 973
Query: 106 AKIKLLTKELSVLKD 120
A+ + LT+ ++ L +
Sbjct: 974 AENRALTRVVARLSE 988
>gi|14195599 protein phosphatase 1, regulatory (inhibitor) subunit
12B isoform d [Homo sapiens]
Length = 224
Score = 41.6 bits (96), Expect = 3e-04
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 46 VAPSKQSKKSSPMDRNSDEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLE 105
VA KQ K S DR+S ++RER + K S ++ + K L+++ LK+ NE+L+
Sbjct: 143 VAQQKQEKTS---DRSSVLEMEKRERRALERKMSEMEEEMKNLHQLKQIQTLKQMNEQLQ 199
Query: 106 AKIKLLTKELSVLKD 120
A+ + LT+ ++ L +
Sbjct: 200 AENRALTRVVARLSE 214
>gi|223972670 thyrotrophic embryonic factor isoform 2 [Homo sapiens]
Length = 273
Score = 40.0 bits (92), Expect = 7e-04
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 50 KQSKKSSPMDRNSDE-YRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKI 108
K++KK D DE Y RR++NN+A K+SR + K R L++EN L ++
Sbjct: 190 KKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEV 249
Query: 109 KLLTKELSVLKDL 121
L KE+ K +
Sbjct: 250 AELRKEVGKCKTI 262
>gi|4507431 thyrotrophic embryonic factor isoform 1 [Homo sapiens]
Length = 303
Score = 40.0 bits (92), Expect = 7e-04
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 50 KQSKKSSPMDRNSDE-YRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKI 108
K++KK D DE Y RR++NN+A K+SR + K R L++EN L ++
Sbjct: 220 KKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEV 279
Query: 109 KLLTKELSVLKDL 121
L KE+ K +
Sbjct: 280 AELRKEVGKCKTI 292
>gi|4885245 FOS-like antigen 2 [Homo sapiens]
Length = 326
Score = 38.9 bits (89), Expect = 0.002
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 43 GKAVAPSKQSKKSSPMDRNSDEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENE 102
G V ++ ++ SP + ++ R RRERN +A K R + ++ + +L+EE
Sbjct: 107 GTTVGRRRRDEQLSPEEE--EKRRIRRERNKLAAAKCRNRRRELTEKLQAETEELEEEKS 164
Query: 103 RLEAKIKLLTKELSVLKDLFLEH 125
L+ +I L KE L+ + + H
Sbjct: 165 GLQKEIAELQKEKEKLEFMLVAH 187
>gi|88900495 HCF-binding transcription factor Zhangfei [Homo
sapiens]
Length = 354
Score = 38.5 bits (88), Expect = 0.002
Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 12/108 (11%)
Query: 13 VNGISVIHTQAHASGLQQVPQLVPAGPGGGGKAVAPSKQSKKSSPMDRNSDEYRQRRERN 72
+NGI + + + ++ + P G GGGG S D N + R+
Sbjct: 167 LNGIGGCSSSSDSGSAEKRRRKSPGGGGGGG------------SGNDNNQAATKSPRKAA 214
Query: 73 NMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKIKLLTKELSVLKD 120
A + +RLK K+ RV L EN+ L A+ + L K + L++
Sbjct: 215 AAAARLNRLKKKEYVMGLESRVRGLAAENQELRAENRELGKRVQALQE 262
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 38.5 bits (88), Expect = 0.002
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 68 RRERNNMAVKKSRL--KSKQKAQDTLQRVNQLKEENERLEAKIKLLTKELSVLKD 120
+ E NN +++ + K+ D L+ VNQLK+ENER + K+KLL K L++
Sbjct: 2753 KEELNNSLKATTQILEELKKTKMDNLKYVNQLKKENERAQGKMKLLIKSCKQLEE 2807
Score = 27.3 bits (59), Expect = 5.0
Identities = 20/100 (20%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 44 KAVAPSKQSKKSSPMDRNSDEYRQRRERNNMAVKKSRLKSKQKAQ-DTLQRVNQLKEENE 102
KA+ + K + +S + + R + + R+++ +K Q +++ + + EN+
Sbjct: 2091 KALEAALVEKGEFALRLSSTQEEVHQLRRGIEKLRVRIEADEKKQLHIAEKLKEREREND 2150
Query: 103 RLEAKIKLLTKELSVL---KDLFLEHAHNLADNVQSISTE 139
L+ K++ L +EL + ++L + A N V+++ T+
Sbjct: 2151 SLKDKVENLERELQMSEENQELVILDAENSKAEVETLKTQ 2190
>gi|239751641 PREDICTED: hypothetical protein XP_002347943 [Homo
sapiens]
Length = 369
Score = 37.4 bits (85), Expect = 0.005
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 42 GGKAVAPS-KQSKKSSPMDRNSDEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEE 100
G + PS ++ ++ P ++ Y ++R +NN A K+SR K + R+ L EE
Sbjct: 55 GARGRGPSIRRQREFMPEEKKDTVYWEKRRKNNEAAKRSREKRRLNDAAIEGRLAALMEE 114
Query: 101 NERLEAKIKLLTKELSVL 118
N L+ ++K L +L
Sbjct: 115 NALLKGELKALKLRFGLL 132
>gi|192807309 TNFAIP3 interacting protein 3 [Homo sapiens]
Length = 325
Score = 37.0 bits (84), Expect = 0.006
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 52 SKKSSPMDRNSDEYRQRRERNNMAVKKSRLKSKQKAQDTL-QRVNQLKEENERLEAKIKL 110
+++ P R + RQR + + + RL+ ++K ++ L + +++LKEEN+ L+ K L
Sbjct: 88 TREKDPHQRQRKDDRQREDDRQRDLTRDRLQREEKEKERLNEELHELKEENKLLKGKNTL 147
Query: 111 LTKE 114
KE
Sbjct: 148 ANKE 151
>gi|192807305 TNFAIP3 interacting protein 3 [Homo sapiens]
Length = 325
Score = 37.0 bits (84), Expect = 0.006
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 52 SKKSSPMDRNSDEYRQRRERNNMAVKKSRLKSKQKAQDTL-QRVNQLKEENERLEAKIKL 110
+++ P R + RQR + + + RL+ ++K ++ L + +++LKEEN+ L+ K L
Sbjct: 88 TREKDPHQRQRKDDRQREDDRQRDLTRDRLQREEKEKERLNEELHELKEENKLLKGKNTL 147
Query: 111 LTKE 114
KE
Sbjct: 148 ANKE 151
>gi|31542493 D site of albumin promoter (albumin D-box) binding
protein [Homo sapiens]
Length = 325
Score = 36.6 bits (83), Expect = 0.008
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 50 KQSKKSSPMDRNSDEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKIK 109
K K P ++ ++Y RR +NN A K+SR + K R L++EN L ++
Sbjct: 243 KARKIQVPEEQKDEKYWSRRYKNNEAAKRSRDARRLKENQISVRAAFLEKENALLRQEVV 302
Query: 110 LLTKELS 116
+ +ELS
Sbjct: 303 AVRQELS 309
>gi|4502263 activating transcription factor 3 isoform 1 [Homo
sapiens]
Length = 181
Score = 36.2 bits (82), Expect = 0.011
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 54 KSSPMDRNSDEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKIKLLTK 113
K+ + ++RRERN +A K R K K+K + + +L+ N L+A+I+ L
Sbjct: 78 KAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKESEKLESVNAELKAQIEELKN 137
Query: 114 E 114
E
Sbjct: 138 E 138
>gi|71902536 activating transcription factor 3 isoform 1 [Homo
sapiens]
Length = 181
Score = 36.2 bits (82), Expect = 0.011
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 54 KSSPMDRNSDEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKIKLLTK 113
K+ + ++RRERN +A K R K K+K + + +L+ N L+A+I+ L
Sbjct: 78 KAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKESEKLESVNAELKAQIEELKN 137
Query: 114 E 114
E
Sbjct: 138 E 138
>gi|102469037 jun D proto-oncogene [Homo sapiens]
Length = 347
Score = 35.8 bits (81), Expect = 0.014
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 25/113 (22%)
Query: 26 SGLQQVPQLVPAGPGGGGKAVAPSKQSKKSSPMDRNSDEY---RQRRERNNMAVKKSRLK 82
+ L+ PQ VP P G +S SP+D ++ E ++R RN +A K R +
Sbjct: 237 AALKDEPQTVPDVPSFG--------ESPPLSPIDMDTQERIKAERKRLRNRIAASKCRKR 288
Query: 83 SKQKAQDTLQRVNQLKE-------ENERLEAKIKLLTKELSVLKDLFLEHAHN 128
L+R+++L+E +N L + LL ++++ LK L H ++
Sbjct: 289 K-------LERISRLEEKVKTLKSQNTELASTASLLREQVAQLKQKVLSHVNS 334
>gi|205277421 Jun dimerization protein 2 isoform b [Homo sapiens]
Length = 174
Score = 35.8 bits (81), Expect = 0.014
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 43 GKAVAPSKQSKKSSPMDRNSDEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENE 102
GK P K S +D + ++RRE+N +A + R K K++ + + +L+ N
Sbjct: 69 GKRPQPVK-----SELDEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNA 123
Query: 103 RLEAKIKLLTKELSVLKDLFLEHAHNLADNVQSIST 138
L+ +I+ L +E L + H S+ T
Sbjct: 124 ELKTQIEELKQERQQLILMLNRHRPTCIVRTDSVKT 159
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.305 0.122 0.320
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,495,480
Number of Sequences: 37866
Number of extensions: 248740
Number of successful extensions: 2630
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 243
Number of HSP's that attempted gapping in prelim test: 2030
Number of HSP's gapped (non-prelim): 836
length of query: 150
length of database: 18,247,518
effective HSP length: 93
effective length of query: 57
effective length of database: 14,725,980
effective search space: 839380860
effective search space used: 839380860
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.