Guide to the Human Genome
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Name: CEBPG Sequence: fasta or formatted (150aa) NCBI GI: 4502769
Description:

CCAAT/enhancer binding protein gamma

Referenced in:

RNA Polymerase and General Transcription Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         12           1
 C cysteine            0.0          0           0
 D aspartate           4.7          7           1
 E glutamate           6.0          9           2
 F phenylalanine       0.7          1           1
 G glycine             6.7         10           4
 H histidine           2.7          4           1
 I isoleucine          3.3          5           1
 K lysine             10.0         15           2
 L leucine             8.7         13           2
 M methionine          2.0          3           1
 N asparagine          7.3         11           2
 P proline             4.0          6           1
 Q glutamine           9.3         14           2
 R arginine            5.3          8           2
 S serine             10.0         15           2
 T threonine           4.7          7           2
 V valine              6.0          9           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.7          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CCAAT/enhancer binding protein gamma 
CEBPB                 0.201   CCAAT/enhancer binding protein beta 
CEBPA                 0.194   CCAAT/enhancer binding protein alpha 
CEBPD                 0.172   CCAAT/enhancer binding protein delta 
CEBPE                 0.168   CCAAT/enhancer binding protein epsilon 
BATF3                 0.093   basic leucine zipper transcription factor, ATF-like 3...
FOSB                  0.086   FBJ murine osteosarcoma viral oncogene homolog B is...
ATF7                  0.086   activating transcription factor 7 isoform 3 
ATF7                  0.086   activating transcription factor 7 isoform 2 
ATF7                  0.086   activating transcription factor 7 isoform 1 
HLF                   0.078   hepatic leukemia factor 
DDIT3                 0.075   DNA-damage-inducible transcript 3 
ATF2                  0.071   activating transcription factor 2 
BATF                  0.071   basic leucine zipper transcription factor, ATF-like [...
FOS                   0.071   v-fos FBJ murine osteosarcoma viral oncogene homolog ...
PPP1R12B              0.063   protein phosphatase 1, regulatory (inhibitor) subuni...
PPP1R12B              0.063   protein phosphatase 1, regulatory (inhibitor) subuni...
TEF                   0.056   thyrotrophic embryonic factor isoform 2 
TEF                   0.056   thyrotrophic embryonic factor isoform 1 
FOSL2                 0.052   FOS-like antigen 2 
CREBZF                0.052   HCF-binding transcription factor Zhangfei 
CENPF                 0.052   centromere protein F 
LOC100291212          0.045   PREDICTED: hypothetical protein XP_002347943 
TNIP3                 0.045   TNFAIP3 interacting protein 3 
TNIP3                 0.045   TNFAIP3 interacting protein 3 
DBP                   0.045   D site of albumin promoter (albumin D-box) binding p...
ATF3                  0.041   activating transcription factor 3 isoform 1 
ATF3                  0.041   activating transcription factor 3 isoform 1 
JUND                  0.041   jun D proto-oncogene 
JDP2                  0.041   Jun dimerization protein 2 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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