Guide to the Human Genome
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Name: JDP2 Sequence: fasta or formatted (174aa) NCBI GI: 205277421
Description:

Jun dimerization protein 2 isoform b

Referenced in:

CREB / ATF Family
Jun / Fos Complexes

Other entries for this name:
alt prot [163aa] Jun dimerization protein 2 isoform a
alt prot [163aa] Jun dimerization protein 2 isoform a
alt prot [163aa] Jun dimerization protein 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         11           3
 C cysteine            1.1          2           1
 D aspartate           2.3          4           1
 E glutamate          12.6         22           4
 F phenylalanine       1.1          2           1
 G glycine             5.2          9           1
 H histidine           1.1          2           1
 I isoleucine          3.4          6           1
 K lysine              8.6         15           3
 L leucine            12.6         22           2
 M methionine          3.4          6           2
 N asparagine          3.4          6           1
 P proline             8.6         15           2
 Q glutamine           4.6          8           2
 R arginine            9.2         16           3
 S serine              4.6          8           2
 T threonine           5.7         10           2
 V valine              4.6          8           1
 W tryptophan          0.6          1           1
 Y tyrosine            0.6          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Jun dimerization protein 2 isoform b 
JDP2                  0.925   Jun dimerization protein 2 isoform a 
JDP2                  0.925   Jun dimerization protein 2 isoform a 
JDP2                  0.925   Jun dimerization protein 2 isoform a 
ATF3                  0.340   activating transcription factor 3 isoform 1 
ATF3                  0.340   activating transcription factor 3 isoform 1 
FOSL1                 0.196   FOS-like antigen 1 
FOSL2                 0.171   FOS-like antigen 2 
FOSB                  0.168   FBJ murine osteosarcoma viral oncogene homolog B is...
FOS                   0.162   v-fos FBJ murine osteosarcoma viral oncogene homolog ...
BATF                  0.125   basic leucine zipper transcription factor, ATF-like [...
ATF3                  0.112   activating transcription factor 3 isoform 2 
BATF3                 0.112   basic leucine zipper transcription factor, ATF-like 3...
CEBPA                 0.084   CCAAT/enhancer binding protein alpha 
CREB5                 0.084   cAMP responsive element binding protein 5 isoform de...
CREB5                 0.084   cAMP responsive element binding protein 5 isoform be...
CREB5                 0.084   cAMP responsive element binding protein 5 isoform ga...
CREB5                 0.084   cAMP responsive element binding protein 5 isoform al...
CREB3L1               0.084   cAMP responsive element binding protein 3-like 1 [Ho...
ATF2                  0.081   activating transcription factor 2 
ATF7                  0.078   activating transcription factor 7 isoform 3 
ATF7                  0.078   activating transcription factor 7 isoform 2 
ATF7                  0.078   activating transcription factor 7 isoform 1 
CREB3L2               0.069   cAMP responsive element binding protein 3-like 2 [Ho...
JUN                   0.062   jun oncogene 
ATF5                  0.062   activating transcription factor 5 
JUND                  0.059   jun D proto-oncogene 
ATF6                  0.056   activating transcription factor 6 
CREB1                 0.053   cAMP responsive element binding protein 1 isoform A [...
CREB1                 0.053   cAMP responsive element binding protein 1 isoform B ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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