Guide to the Human Genome
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Name: PPP1R12B Sequence: fasta or formatted (998aa) NCBI GI: 14195601
Description:

protein phosphatase 1, regulatory (inhibitor) subunit 12B isoform b

Referenced in:

Myosin
Serine / Threonine Protein Phosphatases

Other entries for this name:
alt prot [208aa] protein phosphatase 1, regulatory (inhibitor) subunit 12B isoform c
alt prot [224aa] protein phosphatase 1, regulatory (inhibitor) subunit 12B isoform d
alt prot [982aa] protein phosphatase 1, regulatory (inhibitor) subunit 12B isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         82           3
 C cysteine            0.8          8           1
 D aspartate           5.0         50           1
 E glutamate          12.6        126           4
 F phenylalanine       1.4         14           2
 G glycine             4.6         46           2
 H histidine           1.6         16           1
 I isoleucine          2.9         29           1
 K lysine              6.3         63           2
 L leucine             8.4         84           3
 M methionine          1.5         15           1
 N asparagine          4.4         44           1
 P proline             4.2         42           1
 Q glutamine           5.0         50           2
 R arginine            8.8         88           3
 S serine             10.9        109           6
 T threonine           6.5         65           3
 V valine              4.0         40           2
 W tryptophan          1.1         11           1
 Y tyrosine            1.6         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 1, regulatory (inhibitor) subuni... 
PPP1R12B              0.967   protein phosphatase 1, regulatory (inhibitor) subunit...
PPP1R12A              0.422   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.422   protein phosphatase 1, regulatory (inhibitor) subunit...
PPP1R12A              0.365   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12B              0.210   protein phosphatase 1, regulatory (inhibitor) subuni...
PPP1R12B              0.177   protein phosphatase 1, regulatory (inhibitor) subuni...
PPP1R12C              0.159   protein phosphatase 1, regulatory subunit 12C 
PPP1R16A              0.094   protein phosphatase 1, regulatory (inhibitor) subuni...
PPP1R16B              0.090   protein phosphatase 1 regulatory inhibitor subunit 1...
MYO16                 0.053   myosin heavy chain Myr 8 
ANKK1                 0.044   ankyrin repeat and kinase domain containing 1 
ANK2                  0.042   ankyrin 2 isoform 3 
ANK2                  0.042   ankyrin 2 isoform 2 
ANK2                  0.042   ankyrin 2 isoform 1 
ANK3                  0.042   ankyrin 3 isoform 1 
ANKRD44               0.042   ankyrin repeat domain 44 
DAPK1                 0.040   death-associated protein kinase 1 
CASKIN2               0.039   cask-interacting protein 2 isoform a 
TNKS2                 0.039   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
TNKS                  0.038   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANK1                  0.037   ankyrin 1 isoform 1 
ANK1                  0.037   ankyrin 1 isoform 3 
ANK1                  0.037   ankyrin 1 isoform 2 
ANK1                  0.037   ankyrin 1 isoform 4 
DYSFIP1               0.037   dysferlin-interacting protein 1 
ANKRD6                0.037   ankyrin repeat domain 6 
ANKHD1                0.036   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.036   ANKHD1-EIF4EBP3 protein 
CASKIN1               0.036   CASK interacting protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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